RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 FAM50BQ9Y247 325 aa19.13■□□□□ 0.65
HDGFL3-203ENST00000563404 NOC2LQ9Y3T9 749 aaKnown RBP19.13■□□□□ 0.65
HDGFL3-203ENST00000563404 BACH1O14867 736 aa19.12■□□□□ 0.65
HDGFL3-203ENST00000563404 DCXO43602 365 aa19.12■□□□□ 0.65
HDGFL3-203ENST00000563404 HBP1O60381 514 aa19.12■□□□□ 0.65
HDGFL3-203ENST00000563404 ZNF76P36508 570 aa19.12■□□□□ 0.65
HDGFL3-203ENST00000563404 PLA2G4DQ86XP0 818 aa19.12■□□□□ 0.65
HDGFL3-203ENST00000563404 GINS2Q9Y248 185 aa19.12■□□□□ 0.65
HDGFL3-203ENST00000563404 PCDHGC5Q9Y5F6 944 aa19.12■□□□□ 0.65
HDGFL3-203ENST00000563404 TRIOO75962 3097 aa19.11■□□□□ 0.65
HDGFL3-203ENST00000563404 CYP3A4P08684 503 aa19.11■□□□□ 0.65
HDGFL3-203ENST00000563404 STAG3L1P0CL83 205 aa19.11■□□□□ 0.65
HDGFL3-203ENST00000563404 IBSPP21815 317 aaPredicted RBP19.11■□□□□ 0.65
HDGFL3-203ENST00000563404 SARSP49591 514 aaKnown RBP19.11■□□□□ 0.65
HDGFL3-203ENST00000563404 NFX1Q12986 1120 aaKnown RBP19.11■□□□□ 0.65
HDGFL3-203ENST00000563404 PFKFB3Q16875 520 aaPredicted RBP19.11■□□□□ 0.65
HDGFL3-203ENST00000563404 NAALADL2Q58DX5 795 aa19.11■□□□□ 0.65
HDGFL3-203ENST00000563404 SWSAP1Q6NVH7 229 aa19.11■□□□□ 0.65
HDGFL3-203ENST00000563404 POF1BQ8WVV4 589 aa19.11■□□□□ 0.65
HDGFL3-203ENST00000563404 MSLNLQ96KJ4 702 aa19.11■□□□□ 0.65
HDGFL3-203ENST00000563404 GLT8D2Q9H1C3 349 aa19.11■□□□□ 0.65
HDGFL3-203ENST00000563404 ZNF302Q9NR11 478 aa19.11■□□□□ 0.65
HDGFL3-203ENST00000563404 COL1A2P08123 1366 aa19.1■□□□□ 0.65
HDGFL3-203ENST00000563404 IPO5O00410 1097 aaKnown RBP19.1■□□□□ 0.65
HDGFL3-203ENST00000563404 RCAN1P53805 252 aa19.1■□□□□ 0.65
HDGFL3-203ENST00000563404 APOBRQ0VD83 1088 aa19.1■□□□□ 0.65
HDGFL3-203ENST00000563404 SMAD4Q13485 552 aaKnown RBP19.1■□□□□ 0.65
HDGFL3-203ENST00000563404 ZNF484Q5JVG2 852 aa19.1■□□□□ 0.65
HDGFL3-203ENST00000563404 FAM160B1Q5W0V3 765 aa19.1■□□□□ 0.65
HDGFL3-203ENST00000563404 PDXDC2PQ6P474 469 aa19.1■□□□□ 0.65
HDGFL3-203ENST00000563404 PPP1R16BQ96T49 567 aa19.1■□□□□ 0.65
HDGFL3-203ENST00000563404 CLEC1BQ9P126 229 aa19.1■□□□□ 0.65
HDGFL3-203ENST00000563404 HCSTQ9UBK5 93 aa19.1■□□□□ 0.65
HDGFL3-203ENST00000563404 CD207Q9UJ71 328 aa19.1■□□□□ 0.65
HDGFL3-203ENST00000563404 ST3GAL5Q9UNP4 418 aa19.1■□□□□ 0.65
HDGFL3-203ENST00000563404 RPS6KA5O75582 802 aa19.09■□□□□ 0.65
HDGFL3-203ENST00000563404 C22orf31O95567 290 aa19.09■□□□□ 0.65
HDGFL3-203ENST00000563404 PKN1Q16512 942 aa19.09■□□□□ 0.65
HDGFL3-203ENST00000563404 FAM102BQ5T8I3 360 aa19.09■□□□□ 0.65
HDGFL3-203ENST00000563404 MIS18BP1Q6P0N0 1132 aa19.09■□□□□ 0.65
HDGFL3-203ENST00000563404 ADAM2Q99965 735 aa19.09■□□□□ 0.65
HDGFL3-203ENST00000563404 ZMYND12Q9H0C1 365 aa19.09■□□□□ 0.65
HDGFL3-203ENST00000563404 RGS18Q9NS28 235 aa19.09■□□□□ 0.65
HDGFL3-203ENST00000563404 LRFN2Q9ULH4 789 aa19.09■□□□□ 0.65
HDGFL3-203ENST00000563404 NAP1L2Q9ULW6 460 aaPredicted RBP19.09■□□□□ 0.65
HDGFL3-203ENST00000563404 PLXNA4Q9HCM2 1894 aa19.09■□□□□ 0.65
HDGFL3-203ENST00000563404 MUC6Q6W4X9 2439 aa19.09■□□□□ 0.65
HDGFL3-203ENST00000563404 ESYT2A0FGR8 921 aa19.08■□□□□ 0.64
HDGFL3-203ENST00000563404 C9IYK1 514 aa19.08■□□□□ 0.64
HDGFL3-203ENST00000563404 EYA4O95677 639 aa19.08■□□□□ 0.64
HDGFL3-203ENST00000563404 GLP2RO95838 553 aa19.08■□□□□ 0.64
HDGFL3-203ENST00000563404 NDUFV1P49821 464 aa19.08■□□□□ 0.64
HDGFL3-203ENST00000563404 METAP2P50579 478 aaKnown RBP eCLIP19.08■□□□□ 0.64
HDGFL3-203ENST00000563404 KRT32Q14532 448 aa19.08■□□□□ 0.64
HDGFL3-203ENST00000563404 KIZQ2M2Z5 673 aa19.08■□□□□ 0.64
HDGFL3-203ENST00000563404 FAM228AQ86W67 206 aa19.08■□□□□ 0.64
HDGFL3-203ENST00000563404 EFHBQ8N7U6 833 aa19.08■□□□□ 0.64
HDGFL3-203ENST00000563404 KCNB2Q92953 911 aa19.08■□□□□ 0.64
HDGFL3-203ENST00000563404 OSMRQ99650 979 aa19.08■□□□□ 0.64
HDGFL3-203ENST00000563404 ZNF577Q9BSK1 485 aa19.08■□□□□ 0.64
HDGFL3-203ENST00000563404 PCDHB7Q9Y5E2 793 aa19.08■□□□□ 0.64
HDGFL3-203ENST00000563404 MAFBQ9Y5Q3 323 aaPredicted RBP19.08■□□□□ 0.64
HDGFL3-203ENST00000563404 FNDC1Q4ZHG4 1894 aaPredicted RBP19.07■□□□□ 0.64
HDGFL3-203ENST00000563404 EVPLQ92817 2033 aa19.07■□□□□ 0.64
HDGFL3-203ENST00000563404 TBKBP1A7MCY6 615 aa19.07■□□□□ 0.64
HDGFL3-203ENST00000563404 EDIL3O43854 480 aa19.07■□□□□ 0.64
HDGFL3-203ENST00000563404 PPFIA3O75145 1194 aa19.07■□□□□ 0.64
HDGFL3-203ENST00000563404 GPR32O75388 356 aa19.07■□□□□ 0.64
HDGFL3-203ENST00000563404 CDC45O75419 566 aa19.07■□□□□ 0.64
HDGFL3-203ENST00000563404 NRIP1P48552 1158 aa19.07■□□□□ 0.64
HDGFL3-203ENST00000563404 Q6ZUG5 572 aa19.07■□□□□ 0.64
HDGFL3-203ENST00000563404 TRMT1LQ7Z2T5 733 aaKnown RBP19.07■□□□□ 0.64
HDGFL3-203ENST00000563404 RBM23Q86U06 439 aaKnown RBP19.07■□□□□ 0.64
HDGFL3-203ENST00000563404 RASGRP4Q8TDF6 673 aa19.07■□□□□ 0.64
HDGFL3-203ENST00000563404 MUTYHQ9UIF7 546 aa19.07■□□□□ 0.64
HDGFL3-203ENST00000563404 WDFY4Q6ZS81 3184 aa19.07■□□□□ 0.64
HDGFL3-203ENST00000563404 NID2Q14112 1375 aa19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 DENND3A2RUS2 1198 aa19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 VTNP04004 478 aa19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 HMGB1P09429 215 aaKnown RBP19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 CRYBB1P53674 252 aaPredicted RBP19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 DSC3Q14574 896 aa19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 CSPP1Q1MSJ5 1256 aa19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 ZNF746Q6NUN9 644 aaPredicted RBP19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 SLC24A5Q71RS6 500 aa19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 CENPQQ7L2Z9 268 aaPredicted RBP19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 RNF135Q8IUD6 432 aa19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 CKAP2LQ8IYA6 745 aa19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 SMRP1Q8NCR6 262 aa19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 BBXQ8WY36 941 aaPredicted RBP19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 BRF1Q92994 677 aa19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 LENG9Q96B70 501 aa19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 C1orf112Q9NSG2 853 aa19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 TBC1D22BQ9NU19 505 aa19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 BARX2Q9UMQ3 279 aaPredicted RBP19.06■□□□□ 0.64
HDGFL3-203ENST00000563404 GPR182O15218 404 aa19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 PRPF3O43395 683 aaKnown RBP19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 FGFR1P11362 822 aa19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 CLCN3P51790 818 aa19.05■□□□□ 0.64
HDGFL3-203ENST00000563404 FAM189BP81408 668 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms