RNA–Protein interactions for RNA: ENST00000563383.1

CX3CL1-202, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 5 BASIC

Gene CX3CL1, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-202ENST00000563383 UBE2SQ16763 222 aa11.2□□□□□ -0.62
CX3CL1-202ENST00000563383 GLE1Q53GS7 698 aaKnown RBP11.2□□□□□ -0.62
CX3CL1-202ENST00000563383 ANKRD42Q8N9B4 389 aa11.2□□□□□ -0.62
CX3CL1-202ENST00000563383 CCDC63Q8NA47 563 aa11.2□□□□□ -0.62
CX3CL1-202ENST00000563383 USP38Q8NB14 1042 aa11.2□□□□□ -0.62
CX3CL1-202ENST00000563383 CCSER1Q9C0I3 900 aa11.2□□□□□ -0.62
CX3CL1-202ENST00000563383 TDRD3Q9H7E2 651 aaKnown RBP11.2□□□□□ -0.62
CX3CL1-202ENST00000563383 GDF3Q9NR23 364 aa11.2□□□□□ -0.62
CX3CL1-202ENST00000563383 DNAJC17Q9NVM6 304 aaKnown RBP11.2□□□□□ -0.62
CX3CL1-202ENST00000563383 CHORDC1Q9UHD1 332 aaPredicted RBP11.2□□□□□ -0.62
CX3CL1-202ENST00000563383 TSKSQ9UJT2 592 aa11.2□□□□□ -0.62
CX3CL1-202ENST00000563383 SNX24Q9Y343 169 aa11.2□□□□□ -0.62
CX3CL1-202ENST00000563383 UTP11Q9Y3A2 253 aaKnown RBP11.2□□□□□ -0.62
CX3CL1-202ENST00000563383 ATRNO75882 1429 aa11.2□□□□□ -0.62
CX3CL1-202ENST00000563383 KIF2BQ8N4N8 673 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 ANKS4BQ8N8V4 417 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 TATDN2Q93075 761 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 LRRC4CQ9HCJ2 640 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 KCNK9Q9NPC2 374 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 COL4A3BPQ9Y5P4 624 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 GRID2IPA4D2P6 1211 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 PPIP5K2O43314 1243 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 CYTH3O43739 400 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 FGGP02679 453 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 SLC9A1P19634 815 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 REXO1Q8N1G1 1221 aaKnown RBP11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 KCNV2Q8TDN2 545 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 BAP1Q92560 729 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 STAMBPL1Q96FJ0 436 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 LBHD1Q9BQE6 289 aaPredicted RBP11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 FAM167BQ9BTA0 163 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 PANK4Q9NVE7 773 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 NOC2LQ9Y3T9 749 aaKnown RBP11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 BTAF1O14981 1849 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 ANKRD36CQ5JPF3 1778 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 TLR2O60603 784 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 PRLRP16471 622 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 FKBP3Q00688 224 aaKnown RBP11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 KCNMA1Q12791 1236 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 GRIK3Q13003 919 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 ALKBH5Q6P6C2 394 aaKnown RBP11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 GJB7Q6PEY0 223 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 KCNK18Q7Z418 384 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 CCDC197Q8NCU1 140 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 GLG1Q92896 1179 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 RSRC1Q96IZ7 334 aaKnown RBP11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 SAMD15Q9P1V8 674 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 ATP6V0A2Q9Y487 856 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 PCDHB13Q9Y5F0 798 aa11.19□□□□□ -0.62
CX3CL1-202ENST00000563383 E9PMD0 336 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 MEIS1O00470 390 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 SNUPNO95149 360 aaKnown RBP11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 MMEP08473 750 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 MRPL12P52815 198 aaKnown RBP11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 RCAN1P53805 252 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 PTK2Q05397 1052 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 NAB2Q15742 525 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 ANKRD20A8PQ5CZ79 823 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 FAM26FQ5R3K3 315 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 TRIM68Q6AZZ1 485 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 METTL13Q8N6R0 699 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 ANKS1AQ92625 1134 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 SAAL1Q96ER3 474 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 ATF5Q9Y2D1 282 aaPredicted RBP11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 PTPN22Q9Y2R2 807 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 CICQ96RK0 1608 aaPredicted RBP11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 A0A1W2PQJ5 194 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 PGRMC1O00264 195 aaKnown RBP11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 CLIC2O15247 247 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 KIF4AO95239 1232 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 ZBTB7AO95365 584 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 GNA11P29992 359 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 TRAF1Q13077 416 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 ZNF772Q68DY9 489 aaPredicted RBP11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 MIGA2Q7L4E1 593 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 TEKT1Q969V4 418 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 FAM210AQ96ND0 272 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 FGFBP2Q9BYJ0 223 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 KIAA1024Q9UPX6 916 aa11.18□□□□□ -0.62
CX3CL1-202ENST00000563383 RGS16O15492 202 aaPredicted RBP11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 GNAQP50148 359 aa11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 CENPPQ6IPU0 288 aa11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 RNF10Q8N5U6 811 aaKnown RBP11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 C7orf25Q9BPX7 421 aa11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 ZNF287Q9HBT7 754 aa11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 ANAPC4Q9UJX5 808 aa11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 G3BP2Q9UN86 482 aaKnown RBP11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 GFPT2O94808 682 aa11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 CHN1P15882 459 aa11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 ADRA2BP18089 450 aa11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 UAP1Q16222 522 aaPredicted RBP11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 SLC18A3Q16572 532 aa11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 SLC27A3Q5K4L6 730 aa11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 PPP4R3AQ6IN85 833 aa11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 KRT25Q7Z3Z0 450 aa11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 RPUSD2Q8IZ73 545 aaKnown RBP11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 RDH13Q8NBN7 331 aa11.17□□□□□ -0.62
CX3CL1-202ENST00000563383 SPDYE1Q8NFV5 336 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms