RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PSMC5P62195 406 aa9.6□□□□□ -0.87
UBR1-204ENST00000563239 RESTQ13127 1097 aa9.6□□□□□ -0.87
UBR1-204ENST00000563239 PTGDRQ13258 359 aa9.6□□□□□ -0.87
UBR1-204ENST00000563239 XKR3Q5GH77 459 aa9.6□□□□□ -0.87
UBR1-204ENST00000563239 NCAPH2Q6IBW4 605 aa9.6□□□□□ -0.87
UBR1-204ENST00000563239 FAM109BQ6ICB4 259 aaPredicted RBP9.6□□□□□ -0.87
UBR1-204ENST00000563239 PSRC1Q6PGN9 363 aaPredicted RBP9.6□□□□□ -0.87
UBR1-204ENST00000563239 OTOP2Q7RTS6 562 aa9.6□□□□□ -0.87
UBR1-204ENST00000563239 RPUSD2Q8IZ73 545 aaKnown RBP9.6□□□□□ -0.87
UBR1-204ENST00000563239 ZNF579Q8NAF0 562 aaKnown RBP9.6□□□□□ -0.87
UBR1-204ENST00000563239 TET1Q8NFU7 2136 aa9.6□□□□□ -0.87
UBR1-204ENST00000563239 TNPO1Q92973 898 aaKnown RBP9.6□□□□□ -0.87
UBR1-204ENST00000563239 LRCH3Q96II8 777 aa9.6□□□□□ -0.87
UBR1-204ENST00000563239 FAM167AQ96KS9 214 aa9.6□□□□□ -0.87
UBR1-204ENST00000563239 EIF2AK1Q9BQI3 630 aaKnown RBP9.6□□□□□ -0.87
UBR1-204ENST00000563239 SH2D3AQ9BRG2 576 aa9.6□□□□□ -0.87
UBR1-204ENST00000563239 NRBP2Q9NSY0 501 aa9.6□□□□□ -0.87
UBR1-204ENST00000563239 NOL7Q9UMY1 257 aaKnown RBP9.6□□□□□ -0.87
UBR1-204ENST00000563239 MTMR6Q9Y217 621 aa9.6□□□□□ -0.87
UBR1-204ENST00000563239 SIP14410 1827 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 DDX11L8A8MPP1 907 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 PARNO95453 639 aaKnown RBP9.59□□□□□ -0.87
UBR1-204ENST00000563239 PFKMP08237 780 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 SPATA31C1P0DKV0 1188 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 PDCP20941 246 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 TECP42680 631 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 MRPS6P82932 125 aaKnown RBP9.59□□□□□ -0.87
UBR1-204ENST00000563239 CYP4A11Q02928 519 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 TMEM62Q0P6H9 643 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 CTTNQ14247 550 aaKnown RBP9.59□□□□□ -0.87
UBR1-204ENST00000563239 PLEKHG4Q58EX7 1191 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 RILPL1Q5EBL4 403 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 PLA2G4FQ68DD2 849 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 FERMT3Q86UX7 667 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 HSCBQ8IWL3 235 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 C4orf19Q8IY42 314 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 RNPC3Q96LT9 517 aaKnown RBP9.59□□□□□ -0.87
UBR1-204ENST00000563239 LXNQ9BS40 222 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 FAM49AQ9H0Q0 323 aaPredicted RBP9.59□□□□□ -0.87
UBR1-204ENST00000563239 CDHR5Q9HBB8 845 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 CDY2AQ9Y6F7 541 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 MYH9P35579 1960 aaKnown RBP9.59□□□□□ -0.87
UBR1-204ENST00000563239 COL6A3P12111 3177 aa9.59□□□□□ -0.87
UBR1-204ENST00000563239 KAT6AQ92794 2004 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 CHD7Q9P2D1 2997 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 A0A087WWV3 80 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 IGKV6-21A0A0C4DH24 114 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 VPS37CA5D8V6 355 aaPredicted RBP9.58□□□□□ -0.88
UBR1-204ENST00000563239 GRXCR1A8MXD5 290 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 MAGEB2O15479 319 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 MED24O75448 989 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 LYPLA2O95372 231 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 FXR2P51116 673 aaKnown RBP eCLIP9.58□□□□□ -0.88
UBR1-204ENST00000563239 NPEPPSP55786 919 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 ATP2C1P98194 919 aaPredicted RBP9.58□□□□□ -0.88
UBR1-204ENST00000563239 DRP2Q13474 957 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 LPIN1Q14693 890 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 ECM1Q16610 540 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 MTERF2Q49AM1 385 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 FBXO47Q5MNV8 452 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 FAM173BQ6P4H8 233 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 BRAPQ7Z569 592 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 CATSPER3Q86XQ3 398 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 NME8Q8N427 588 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 LRRC71Q8N4P6 559 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 IGSF22Q8N9C0 903 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 DBF4BQ8NFT6 615 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 FTOQ9C0B1 505 aaKnown RBP eCLIP9.58□□□□□ -0.88
UBR1-204ENST00000563239 ZSWIM4Q9H7M6 989 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 AGO3Q9H9G7 860 aaKnown RBP9.58□□□□□ -0.88
UBR1-204ENST00000563239 SEPT9Q9UHD8 586 aaPredicted RBP9.58□□□□□ -0.88
UBR1-204ENST00000563239 CEP131Q9UPN4 1083 aa9.58□□□□□ -0.88
UBR1-204ENST00000563239 KDM3AQ9Y4C1 1321 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 PP2D1A8MPX8 630 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 STX6O43752 255 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 GPR32O75388 356 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 MAFO75444 373 aaPredicted RBP9.57□□□□□ -0.88
UBR1-204ENST00000563239 GHRP10912 638 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 YWHABP31946 246 aaKnown RBP9.57□□□□□ -0.88
UBR1-204ENST00000563239 PRPHP41219 470 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 CLCN3P51790 818 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 PDIA5Q14554 519 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 EFCAB12Q6NXP0 572 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 CNKSR3Q6P9H4 555 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 RSPH3Q86UC2 560 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 TPH2Q8IWU9 490 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 METTL13Q8N6R0 699 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 NEK9Q8TD19 979 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 TMEM40Q8WWA1 233 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 MMTAG2Q9BU76 263 aaKnown RBP9.57□□□□□ -0.88
UBR1-204ENST00000563239 POLR3CQ9BUI4 534 aaPredicted RBP9.57□□□□□ -0.88
UBR1-204ENST00000563239 CELF4Q9BZC1 486 aaKnown RBP9.57□□□□□ -0.88
UBR1-204ENST00000563239 ADAMTS10Q9H324 1103 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 CYP26B1Q9NR63 512 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 TRPV2Q9Y5S1 764 aa9.57□□□□□ -0.88
UBR1-204ENST00000563239 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.56□□□□□ -0.88
UBR1-204ENST00000563239 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.56□□□□□ -0.88
UBR1-204ENST00000563239 LAD1O00515 517 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 DKC1O60832 514 aaKnown RBP eCLIP9.56□□□□□ -0.88
UBR1-204ENST00000563239 BAIAP3O94812 1187 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms