RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 MARCKSP29966 332 aaPredicted RBP19.55■□□□□ 0.72
CCNDBP1-204ENST00000563065 GRIN1Q05586 938 aa19.55■□□□□ 0.72
CCNDBP1-204ENST00000563065 FPGSQ05932 587 aa19.55■□□□□ 0.72
CCNDBP1-204ENST00000563065 PDIA5Q14554 519 aa19.55■□□□□ 0.72
CCNDBP1-204ENST00000563065 TARBP2Q15633 366 aaKnown RBP19.55■□□□□ 0.72
CCNDBP1-204ENST00000563065 ECM1Q16610 540 aa19.55■□□□□ 0.72
CCNDBP1-204ENST00000563065 C4orf19Q8IY42 314 aa19.55■□□□□ 0.72
CCNDBP1-204ENST00000563065 TMEM199Q8N511 208 aa19.55■□□□□ 0.72
CCNDBP1-204ENST00000563065 UBE2OQ9C0C9 1292 aaKnown RBP19.55■□□□□ 0.72
CCNDBP1-204ENST00000563065 BRD1O95696 1058 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 SELPP16109 830 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 YWHABP31946 246 aaKnown RBP19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 RBL2Q08999 1139 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 TMEM62Q0P6H9 643 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 SCN5AQ14524 2016 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 MBTPS1Q14703 1052 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 DEFB128Q7Z7B8 93 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 CCDC155Q8N6L0 562 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 PIGOQ8TEQ8 1089 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 CHAMP1Q96JM3 812 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 PRO3102Q9H379 93 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 COL1A2P08123 1366 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 LAMA2P24043 3122 aaKnown RBP19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 ARL6IP4Q66PJ3 421 aaKnown RBP19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 TAF2Q6P1X5 1199 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 LRRC8DQ7L1W4 858 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 KIAA0319LQ8IZA0 1049 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 LRRC71Q8N4P6 559 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 METTL13Q8N6R0 699 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 MMTAG2Q9BU76 263 aaKnown RBP19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 POLR3CQ9BUI4 534 aaPredicted RBP19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 CEP131Q9UPN4 1083 aa19.54■□□□□ 0.72
CCNDBP1-204ENST00000563065 EVPLQ92817 2033 aa19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 RSPH10B2B2RC85 870 aa19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 NBNO60934 754 aa19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 CHRNA1P02708 482 aa19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 RSPH10BP0C881 870 aa19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 PDIA4P13667 645 aaKnown RBP19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 CCT6AP40227 531 aaKnown RBP19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 CLCN3P51790 818 aa19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 C9orf50Q5SZB4 431 aa19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 EFCAB12Q6NXP0 572 aa19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 POTEGQ6S5H5 508 aa19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 NEK9Q8TD19 979 aa19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 CEP170P1Q96L14 293 aa19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 PPP1R16BQ96T49 567 aa19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 SUGCTQ9HAC7 445 aa19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 CYP26B1Q9NR63 512 aa19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 BMP2KQ9NSY1 1161 aaPredicted RBP19.53■□□□□ 0.72
CCNDBP1-204ENST00000563065 SMIM35A0A1B0GVV1 85 aa19.52■□□□□ 0.72
CCNDBP1-204ENST00000563065 DKC1O60832 514 aaKnown RBP eCLIP19.52■□□□□ 0.72
CCNDBP1-204ENST00000563065 LYPLA2O95372 231 aa19.52■□□□□ 0.72
CCNDBP1-204ENST00000563065 RPA1P27694 616 aa19.52■□□□□ 0.72
CCNDBP1-204ENST00000563065 TBC1D8BQ0IIM8 1120 aa19.52■□□□□ 0.72
CCNDBP1-204ENST00000563065 MKRN4PQ13434 485 aaPredicted RBP19.52■□□□□ 0.72
CCNDBP1-204ENST00000563065 DRP2Q13474 957 aa19.52■□□□□ 0.72
CCNDBP1-204ENST00000563065 ERMNQ8TAM6 284 aa19.52■□□□□ 0.72
CCNDBP1-204ENST00000563065 SNX29Q8TEQ0 813 aa19.52■□□□□ 0.72
CCNDBP1-204ENST00000563065 TUFT1Q9NNX1 390 aa19.52■□□□□ 0.72
CCNDBP1-204ENST00000563065 TET1Q8NFU7 2136 aa19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 LAMA3Q16787 3333 aa19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 BMP15O95972 392 aa19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 VTNP04004 478 aa19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 BMP8BP34820 402 aa19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 PPIGQ13427 754 aaKnown RBP eCLIP19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 SHHQ15465 462 aa19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 ZRSR1Q15695 479 aaKnown RBP19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 TCTN1Q2MV58 587 aa19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 XKR9Q5GH70 373 aa19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 SPECC1Q5M775 1068 aa19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 RPAINQ86UA6 219 aa19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 LINC01465Q8N7H1 131 aa19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 ZNF668Q96K58 619 aaPredicted RBP19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 CLIC6Q96NY7 704 aa19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 PLIN2Q99541 437 aa19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.51■□□□□ 0.711e-6■■■■□ 20.1
CCNDBP1-204ENST00000563065 RAB34Q9BZG1 259 aa19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 CDHR5Q9HBB8 845 aa19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 IL23AQ9NPF7 189 aa19.51■□□□□ 0.71
CCNDBP1-204ENST00000563065 MAGEB2O15479 319 aa19.5■□□□□ 0.71
CCNDBP1-204ENST00000563065 DDIT3P35638 169 aa19.5■□□□□ 0.71
CCNDBP1-204ENST00000563065 NASPP49321 788 aaPredicted RBP19.5■□□□□ 0.71
CCNDBP1-204ENST00000563065 DNM1Q05193 864 aaKnown RBP19.5■□□□□ 0.71
CCNDBP1-204ENST00000563065 MGAT3Q09327 533 aa19.5■□□□□ 0.71
CCNDBP1-204ENST00000563065 SLC39A14Q15043 492 aa19.5■□□□□ 0.71
CCNDBP1-204ENST00000563065 TMEM240Q5SV17 173 aa19.5■□□□□ 0.71
CCNDBP1-204ENST00000563065 ZNF365Q70YC5 407 aa19.5■□□□□ 0.71
CCNDBP1-204ENST00000563065 OTUD6AQ7L8S5 288 aa19.5■□□□□ 0.71
CCNDBP1-204ENST00000563065 RSPH3Q86UC2 560 aa19.5■□□□□ 0.71
CCNDBP1-204ENST00000563065 ZNF396Q96N95 335 aaPredicted RBP19.5■□□□□ 0.71
CCNDBP1-204ENST00000563065 FBXO2Q9UK22 296 aaPredicted RBP19.5■□□□□ 0.71
CCNDBP1-204ENST00000563065 KIAA1024Q9UPX6 916 aa19.5■□□□□ 0.71
CCNDBP1-204ENST00000563065 CDY2AQ9Y6F7 541 aa19.5■□□□□ 0.71
CCNDBP1-204ENST00000563065 MAFO75444 373 aaPredicted RBP19.49■□□□□ 0.71
CCNDBP1-204ENST00000563065 MRPS6P82932 125 aaKnown RBP19.49■□□□□ 0.71
CCNDBP1-204ENST00000563065 FAM26DQ5JW98 314 aa19.49■□□□□ 0.71
CCNDBP1-204ENST00000563065 KRT79Q5XKE5 535 aa19.49■□□□□ 0.71
CCNDBP1-204ENST00000563065 HAUS3Q68CZ6 603 aa19.49■□□□□ 0.71
CCNDBP1-204ENST00000563065 USP49Q70CQ1 688 aa19.49■□□□□ 0.71
CCNDBP1-204ENST00000563065 LINC00301Q8NCQ3 95 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms