RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 MICALCLQ6ZW33 695 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 PROCA1Q8NCQ7 364 aaPredicted RBP8.21□□□□□ -1.09
TCF4-216ENST00000562680 PRDM16Q9HAZ2 1276 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 CTTNBP2NLQ9P2B4 639 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 POTEFA5A3E0 1075 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 ATP2A1O14983 1001 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 POTEIP0CG38 1075 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 INPP5BP32019 993 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 AP3M2P53677 418 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 IGBP1P78318 339 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 TATDN1Q6P1N9 297 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 POTEGQ6S5H5 508 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 POTEEQ6S8J3 1075 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 EEPD1Q7L9B9 569 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 METTL16Q86W50 562 aaKnown RBP8.21□□□□□ -1.09
TCF4-216ENST00000562680 SMYD4Q8IYR2 804 aaPredicted RBP8.21□□□□□ -1.09
TCF4-216ENST00000562680 CCDC26Q8TAB7 109 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 CCDC127Q96BQ5 260 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 C17orf75Q9HAS0 396 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 GDAQ9Y2T3 454 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 MORC2Q9Y6X9 1032 aaPredicted RBP8.21□□□□□ -1.09
TCF4-216ENST00000562680 V9GYY5 206 aaPredicted RBP8.21□□□□□ -1.09
TCF4-216ENST00000562680 FAM205CA6NFA0 338 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 TNPO2O14787 897 aaKnown RBP8.21□□□□□ -1.1
TCF4-216ENST00000562680 MAGEB2O15479 319 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 PEX3P56589 373 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 SMC1AQ14683 1233 aaKnown RBP8.21□□□□□ -1.1
TCF4-216ENST00000562680 Q4G0T1 1027 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 TYW1BQ6NUM6 668 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 TTC39CQ8N584 583 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 SMARCAD1Q9H4L7 1026 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 PPME1Q9Y570 386 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 TLR3O15455 904 aaKnown RBP8.21□□□□□ -1.1
TCF4-216ENST00000562680 HOXC6P09630 235 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 DSG3P32926 999 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 ECE1P42892 770 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 RPS6P62753 249 aaKnown RBP8.21□□□□□ -1.1
TCF4-216ENST00000562680 KRT31Q15323 416 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 ARHGAP44Q17R89 818 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 ENGASEQ8NFI3 743 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 DNERQ8NFT8 737 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 RPS6KC1Q96S38 1066 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 ARFGAP3Q9NP61 516 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 KCNQ5Q9NR82 932 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 FAM217BQ9NTX9 383 aaPredicted RBP8.21□□□□□ -1.1
TCF4-216ENST00000562680 ANKFY1Q9P2R3 1169 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 PLIN4Q96Q06 1357 aa8.21□□□□□ -1.1
TCF4-216ENST00000562680 A0A1W2PQC6 194 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 DDNO94850 711 aaPredicted RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 GH1P01241 217 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 NR3C1P04150 777 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 ZNF157P51786 506 aaPredicted RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 GABPAQ06546 454 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 EDRF1Q3B7T1 1238 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 BTNL9Q6UXG8 535 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 MICALL1Q8N3F8 863 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 PIGOQ8TEQ8 1089 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 CCDC102AQ96A19 550 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 CENPHQ9H3R5 247 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 CXorf56Q9H5V9 222 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 SAMSN1Q9NSI8 373 aaKnown RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 ASAP2O43150 1006 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 CELF2O95319 508 aaKnown RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 DLATP10515 647 aaKnown RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 GCKP35557 465 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 PIK3CAP42336 1068 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 STAT5BP51692 787 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 ADKP55263 362 aaKnown RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 DPYDQ12882 1025 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 PPM1KQ8N3J5 372 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 HESX1Q9UBX0 185 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 POLR3GO15318 223 aaPredicted RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 SLC16A3O15427 465 aaKnown RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 EZRP15311 586 aaKnown RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 ZSCAN20P17040 1043 aaPredicted RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 PRCPP42785 496 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 VAV2P52735 878 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 ETF1P62495 437 aaKnown RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 IFFO1Q0D2I5 559 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 MKRN3Q13064 507 aaKnown RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 GRIK5Q16478 980 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 SWSAP1Q6NVH7 229 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 CCDC155Q8N6L0 562 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 SH3GL3Q99963 347 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 KATNAL1Q9BW62 490 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 CACNB1Q02641 598 aaPredicted RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 RPS6KA1Q15418 735 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 DCUN1D2Q6PH85 259 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 AGBL1Q96MI9 1066 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 SPATA33Q96N06 139 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 MOV10L1Q9BXT6 1211 aaKnown RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 HPSEQ9Y251 543 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 PPP2R2CQ9Y2T4 447 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 NID2Q14112 1375 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 EIF3DO15371 548 aaKnown RBP eCLIP8.2□□□□□ -1.1
TCF4-216ENST00000562680 ALDH1A1P00352 501 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 TXNP10599 105 aaKnown RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 TCP1P17987 556 aaKnown RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 MAPK4P31152 587 aa8.2□□□□□ -1.1
TCF4-216ENST00000562680 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms