RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 RBM46Q8TBY0 533 aaKnown RBP12.07□□□□□ -0.48
RPAP1-204ENST00000562303 ANLNQ9NQW6 1124 aa12.07□□□□□ -0.48
RPAP1-204ENST00000562303 PACSIN2Q9UNF0 486 aaPredicted RBP12.07□□□□□ -0.48
RPAP1-204ENST00000562303 LUC7L3O95232 432 aaKnown RBP12.07□□□□□ -0.48
RPAP1-204ENST00000562303 CCNE1P24864 410 aa12.07□□□□□ -0.48
RPAP1-204ENST00000562303 CRKP46108 304 aa12.07□□□□□ -0.48
RPAP1-204ENST00000562303 BEST2Q8NFU1 509 aa12.07□□□□□ -0.48
RPAP1-204ENST00000562303 KLC2Q9H0B6 622 aa12.07□□□□□ -0.48
RPAP1-204ENST00000562303 NHEJ1Q9H9Q4 299 aaPredicted RBP12.07□□□□□ -0.48
RPAP1-204ENST00000562303 FAM95CA0A1B0GW59 222 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 SYNDIG1LA6NDD5 238 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 HSPA4LO95757 839 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 SNRNP48Q6IEG0 339 aaKnown RBP12.06□□□□□ -0.48
RPAP1-204ENST00000562303 ZNF568Q3ZCX4 644 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 TEX2Q8IWB9 1127 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 PIGOQ8TEQ8 1089 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 BSDC1Q9NW68 430 aaPredicted RBP12.06□□□□□ -0.48
RPAP1-204ENST00000562303 PLXNC1O60486 1568 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 ATP7AQ04656 1500 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 DR1Q01658 176 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 IFT88Q13099 833 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 DCAF4L1Q3SXM0 396 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 MFSD14CQ5VZR4 134 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 MAML1Q92585 1016 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 ZSWIM5Q9P217 1185 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 PYGLP06737 847 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 GCKP35557 465 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 CCT5P48643 541 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 RWDD2BP57060 319 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 ZNF699Q32M78 642 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 TTC23LQ6PF05 361 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 BANK1Q8NDB2 785 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 TRIM15Q9C019 465 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 PRDM5Q9NQX1 630 aaPredicted RBP12.06□□□□□ -0.48
RPAP1-204ENST00000562303 SCHIP1Q9P0W5 487 aaPredicted RBP12.06□□□□□ -0.48
RPAP1-204ENST00000562303 ZNF212Q9UDV6 495 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 PCDHA6Q9UN73 950 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 PCDHA8Q9Y5H6 950 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 PRAMEF22A3QJZ6 481 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 TMCC1O94876 653 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 SASH1O94885 1247 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 ANP32DO95626 131 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 CAPRIN1Q14444 709 aaKnown RBP12.06□□□□□ -0.48
RPAP1-204ENST00000562303 CEP19Q96LK0 163 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 SERPINI1Q99574 410 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 PCDHA13Q9Y5I0 950 aa12.06□□□□□ -0.48
RPAP1-204ENST00000562303 H3BRJ5 948 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 MAP2K2P36507 400 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 AP3B2Q13367 1082 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 DPCR1Q3MIW9 517 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 TRIM59Q8IWR1 403 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 YAF2Q8IY57 180 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 SH3KBP1Q96B97 665 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 SARS2Q9NP81 518 aaKnown RBP12.05□□□□□ -0.48
RPAP1-204ENST00000562303 ATG3Q9NT62 314 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 SPTLC3Q9NUV7 552 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 FEM1BQ9UK73 627 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 PTPRTO14522 1441 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 FAM135BQ49AJ0 1406 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 MAPKBP1O60336 1514 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 PI4K2BG5E9Z4 385 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 TJP3O95049 919 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 GPC3P51654 580 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 IMPG1Q17R60 797 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 SUSD4Q5VX71 490 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 KRT80Q6KB66 452 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 PPP4R3CPQ6ZMV5 832 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 PHLPP2Q6ZVD8 1323 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 USP17L5A8MUK1 530 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 TTLL4Q14679 1199 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 ACRBPQ8NEB7 543 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 SH3RF3Q8TEJ3 882 aaPredicted RBP12.05□□□□□ -0.48
RPAP1-204ENST00000562303 SCG3Q8WXD2 468 aaKnown RBP12.05□□□□□ -0.48
RPAP1-204ENST00000562303 RABGGTAQ92696 567 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 ASIC4Q96FT7 647 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 AP1M1Q9BXS5 423 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 UPF3AQ9H1J1 476 aaKnown RBP12.05□□□□□ -0.48
RPAP1-204ENST00000562303 DNAJC17Q9NVM6 304 aaKnown RBP12.05□□□□□ -0.48
RPAP1-204ENST00000562303 RNF181Q9P0P0 153 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 RASGRF2O14827 1237 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 ZNF467Q7Z7K2 595 aaPredicted RBP12.05□□□□□ -0.48
RPAP1-204ENST00000562303 RASEFQ8IZ41 740 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 MCPH1Q8NEM0 835 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 TUBB6Q9BUF5 446 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 POLR3CQ9BUI4 534 aaPredicted RBP12.05□□□□□ -0.48
RPAP1-204ENST00000562303 NEUROG2Q9H2A3 272 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 ASNSD1Q9NWL6 643 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 MYO3BQ8WXR4 1341 aa12.05□□□□□ -0.48
RPAP1-204ENST00000562303 IKBKBO14920 756 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 CTNND1O60716 968 aaKnown RBP12.04□□□□□ -0.48
RPAP1-204ENST00000562303 ZBED6P86452 979 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 KCNA1Q09470 495 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 TOGARAM2Q6ZUX3 1019 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 ARHGEF25Q86VW2 580 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 OSBP2Q969R2 916 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 ULK4Q96C45 1275 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 NR1H4Q96RI1 486 aaPredicted RBP12.04□□□□□ -0.48
RPAP1-204ENST00000562303 NDST4Q9H3R1 872 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 RRAGDQ9NQL2 400 aaPredicted RBP12.04□□□□□ -0.48
RPAP1-204ENST00000562303 PIH1D3Q9NQM4 214 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms