RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 TRIM59Q8IWR1 403 aa11.27□□□□□ -0.6
TUBGCP4-202ENST00000561691 CNPY4Q8N129 248 aa11.27□□□□□ -0.6
TUBGCP4-202ENST00000561691 RBM46Q8TBY0 533 aaKnown RBP11.27□□□□□ -0.6
TUBGCP4-202ENST00000561691 DCPSQ96C86 337 aaKnown RBP11.27□□□□□ -0.6
TUBGCP4-202ENST00000561691 CDCA5Q96FF9 252 aa11.27□□□□□ -0.6
TUBGCP4-202ENST00000561691 CEP63Q96MT8 703 aa11.27□□□□□ -0.6
TUBGCP4-202ENST00000561691 NACC1Q96RE7 527 aa11.27□□□□□ -0.6
TUBGCP4-202ENST00000561691 NOC4LQ9BVI4 516 aaKnown RBP11.27□□□□□ -0.6
TUBGCP4-202ENST00000561691 TEX13BQ9BXU2 312 aa11.27□□□□□ -0.6
TUBGCP4-202ENST00000561691 IKZF4Q9H2S9 585 aa11.27□□□□□ -0.6
TUBGCP4-202ENST00000561691 R3HDMLQ9H3Y0 253 aa11.27□□□□□ -0.6
TUBGCP4-202ENST00000561691 MRPL44Q9H9J2 332 aaKnown RBP11.27□□□□□ -0.6
TUBGCP4-202ENST00000561691 PKD2L1Q9P0L9 805 aa11.27□□□□□ -0.6
TUBGCP4-202ENST00000561691 BTBD7Q9P203 1132 aa11.27□□□□□ -0.6
TUBGCP4-202ENST00000561691 MAGEC2Q9UBF1 373 aaPredicted RBP11.27□□□□□ -0.6
TUBGCP4-202ENST00000561691 ADGRG1Q9Y653 693 aa11.27□□□□□ -0.6
TUBGCP4-202ENST00000561691 A0A0G2JLL6 359 aaPredicted RBP11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 DDX39AO00148 427 aaKnown RBP11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 TGFB1I1O43294 461 aa11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 CNMDO75829 334 aa11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 NR3C2P08235 984 aa11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 MTIF2P46199 727 aaKnown RBP11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 FKBP3Q00688 224 aaKnown RBP11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 MEA1Q16626 185 aa11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 MAN2A1Q16706 1144 aa11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 EDRF1Q3B7T1 1238 aa11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 XRRA1Q6P2D8 792 aa11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 PRRT2Q7Z6L0 340 aaPredicted RBP11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 SULF1Q8IWU6 871 aa11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 NEK9Q8TD19 979 aa11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 DESI2Q9BSY9 194 aa11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 NAA15Q9BXJ9 866 aaKnown RBP11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 MAF1Q9H063 256 aa11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 NDST4Q9H3R1 872 aa11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 CXorf56Q9H5V9 222 aa11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 HOXC10Q9NYD6 342 aa11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 TMOD4Q9NZQ9 345 aa11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 REXO2Q9Y3B8 237 aaKnown RBP11.27□□□□□ -0.61
TUBGCP4-202ENST00000561691 SFI1A8K8P3 1242 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 IRF6O14896 467 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 KIF1CO43896 1103 aaKnown RBP11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 PPP1R37O75864 691 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 PRPF6O94906 941 aaKnown RBP11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 STBD1O95210 358 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 KRT18P05783 430 aaKnown RBP11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 P4HBP07237 508 aaKnown RBP11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 IVLP07476 585 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 KCNA2P16389 499 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 KRT9P35527 623 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 TBC1D8BQ0IIM8 1120 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 KCNMA1Q12791 1236 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 FSTL1Q12841 308 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 SMC1AQ14683 1233 aaKnown RBP11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 KNOP1Q1ED39 458 aaKnown RBP11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 USP50Q70EL3 339 aaPredicted RBP11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 MIER3Q7Z3K6 550 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 CCDC91Q7Z6B0 441 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 GPATCH11Q8N954 259 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 CEP120Q8N960 986 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 CHP1Q99653 195 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 DEF6Q9H4E7 631 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 ZCCHC17Q9NP64 241 aaKnown RBP11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 TBC1D22BQ9NU19 505 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 AGPAT5Q9NUQ2 364 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 KCNH4Q9UQ05 1017 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 COL4A3BPQ9Y5P4 624 aa11.26□□□□□ -0.61
TUBGCP4-202ENST00000561691 A0A1W2PQJ5 194 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 SPDYE5A6NIY4 337 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 TADA3O75528 432 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 SEC31AO94979 1220 aaKnown RBP11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 TUBB4AP04350 444 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 MYCLP12524 364 aaPredicted RBP11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 GAP43P17677 238 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 NMT1P30419 496 aaKnown RBP11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 ARHGEF16Q5VV41 709 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 CCDC155Q8N6L0 562 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 ZC3H15Q8WU90 426 aaKnown RBP11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 GPRASP2Q96D09 838 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 TSG101Q99816 390 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 SENP7Q9BQF6 1050 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 ACAD9Q9H845 621 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 ELP3Q9H9T3 547 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 KCND2Q9NZV8 630 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 DBR1Q9UK59 544 aaKnown RBP11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 TRAF5O00463 557 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 PDXKO00764 312 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 CCND2P30279 289 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 EPHX2P34913 555 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 RARRES1P49788 294 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 ETF1P62495 437 aaKnown RBP11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 SATB1Q01826 763 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 PPATQ06203 517 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 RETREG2Q8NC44 543 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 PPM1EQ8WY54 764 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 BORCS6Q96GS4 357 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 ZHX3Q9H4I2 956 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 ZSWIM4Q9H7M6 989 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 ODF2LQ9ULJ1 636 aa11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 CTDP1Q9Y5B0 961 aaPredicted RBP11.25□□□□□ -0.61
TUBGCP4-202ENST00000561691 TMEM150BA6NC51 233 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms