RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 RPA1P27694 616 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 ERCC5P28715 1186 aaPredicted RBP8.38□□□□□ -1.07
TPM1-231ENST00000561395 CYP2C19P33261 490 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 COPB2P35606 906 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 ZNF75DP51815 510 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 TPM4P67936 248 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 ASIC1P78348 528 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 CCNA1P78396 465 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 FPGSQ05932 587 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 KMT5BQ4FZB7 885 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 ZNF658Q5TYW1 1059 aaPredicted RBP8.38□□□□□ -1.07
TPM1-231ENST00000561395 POTEGQ6S5H5 508 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 B3GNT9Q6UX72 402 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.38□□□□□ -1.07
TPM1-231ENST00000561395 VSIG10LQ86VR7 867 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 CATSPER3Q86XQ3 398 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 SMYD4Q8IYR2 804 aaPredicted RBP8.38□□□□□ -1.07
TPM1-231ENST00000561395 KCTD17Q8N5Z5 321 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 ARRDC4Q8NCT1 418 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 TRPV1Q8NER1 839 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 NSUN6Q8TEA1 469 aaKnown RBP8.38□□□□□ -1.07
TPM1-231ENST00000561395 PURBQ96QR8 312 aaKnown RBP8.38□□□□□ -1.07
TPM1-231ENST00000561395 RIT2Q99578 217 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 EIF2AK1Q9BQI3 630 aaKnown RBP8.38□□□□□ -1.07
TPM1-231ENST00000561395 TEKT3Q9BXF9 490 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 GTPBP4Q9BZE4 634 aaKnown RBP8.38□□□□□ -1.07
TPM1-231ENST00000561395 LRRC27Q9C0I9 530 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 HSD3B7Q9H2F3 369 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 UNC45AQ9H3U1 944 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 AGO4Q9HCK5 861 aaKnown RBP8.38□□□□□ -1.07
TPM1-231ENST00000561395 JADE2Q9NQC1 790 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 KCNH7Q9NS40 1196 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 BMP2KQ9NSY1 1161 aaPredicted RBP8.38□□□□□ -1.07
TPM1-231ENST00000561395 EXOC1Q9NV70 894 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 KIAA1024Q9UPX6 916 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 MCM3APO60318 1980 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 BRWD1Q9NSI6 2320 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 WDR81Q562E7 1941 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 SYNRGQ9UMZ2 1314 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 TTLL13PA6NNM8 815 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 DHX15O43143 795 aaKnown RBP8.37□□□□□ -1.07
TPM1-231ENST00000561395 CHMP2AO43633 222 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 SLC25A27O95847 323 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 NR3C2P08235 984 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 CLTBP09497 229 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 PLA2G4BP0C869 781 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 MYCLP12524 364 aaPredicted RBP8.37□□□□□ -1.07
TPM1-231ENST00000561395 RAG1P15918 1043 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 CDC25BP30305 580 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 PBX2P40425 430 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 SLC12A3P55017 1021 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 TLE2Q04725 743 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 ITGB3BPQ13352 177 aaPredicted RBP8.37□□□□□ -1.07
TPM1-231ENST00000561395 MTMR1Q13613 665 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 ADGRE1Q14246 886 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 TMEM31Q5JXX7 168 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 WDR78Q5VTH9 848 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 C1orf53Q5VUE5 145 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 UNC13DQ70J99 1090 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 GIMAP8Q8ND71 665 aaPredicted RBP8.37□□□□□ -1.07
TPM1-231ENST00000561395 DNERQ8NFT8 737 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 NPLOC4Q8TAT6 608 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 ENOX1Q8TC92 643 aaKnown RBP8.37□□□□□ -1.07
TPM1-231ENST00000561395 KCNV2Q8TDN2 545 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 CCDC47Q96A33 483 aaKnown RBP8.37□□□□□ -1.07
TPM1-231ENST00000561395 INPP4AQ96PE3 977 aaPredicted RBP8.37□□□□□ -1.07
TPM1-231ENST00000561395 MED15Q96RN5 788 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 HSD17B14Q9BPX1 270 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 MOV10L1Q9BXT6 1211 aaKnown RBP8.37□□□□□ -1.07
TPM1-231ENST00000561395 MFRPQ9BY79 579 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 TRIM5Q9C035 493 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 EPHX3Q9H6B9 360 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 TUFT1Q9NNX1 390 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 SLC5A4Q9NY91 659 aa8.37□□□□□ -1.07
TPM1-231ENST00000561395 CXXC1Q9P0U4 656 aaPredicted RBP8.37□□□□□ -1.07
TPM1-231ENST00000561395 DOCK5Q9H7D0 1870 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 ASTN1O14525 1302 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 PVALEFA0A1B0GWK0 134 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 SLC15A5A6NIM6 579 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 E9PMD0 336 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 KIAA0355O15063 1070 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 STAM2O75886 525 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 BMP1P13497 986 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 ERCC3P19447 782 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 MUTP22033 750 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 IGFBP4P22692 258 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 ADCYAP1R1P41586 468 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 CNTN2Q02246 1040 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 CYP4A11Q02928 519 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 TFF2Q03403 129 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 GRB14Q14449 540 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 DHX8Q14562 1220 aaKnown RBP8.36□□□□□ -1.07
TPM1-231ENST00000561395 EPHA7Q15375 998 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 COBLL1Q53SF7 1204 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 HS1BP3Q53T59 392 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 KLHL10Q6JEL2 608 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.36□□□□□ -1.07
TPM1-231ENST00000561395 NLRX1Q86UT6 975 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 GPBP1Q86WP2 473 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 NCAPG2Q86XI2 1143 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms