RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 C17orf102A2RUQ5 167 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 RRN3P2A6NIE6 340 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 GNAT1P11488 350 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 ADAM17P78536 824 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 ZNF200P98182 395 aaPredicted RBP11.49□□□□□ -0.57
LRRC28-221ENST00000561276 PPFIA1Q13136 1202 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 GRB10Q13322 594 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 SNX17Q15036 470 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 KARSQ15046 597 aaKnown RBP11.49□□□□□ -0.57
LRRC28-221ENST00000561276 GRIK4Q16099 956 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 TPRNQ4KMQ1 711 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 HYIQ5T013 277 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 MARCH8Q5T0T0 291 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 POTEGQ6S5H5 508 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 SHC4Q6S5L8 630 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 ANKRD33Q7Z3H0 272 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 LMBR1Q8WVP7 490 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 CDK5RAP3Q96JB5 506 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 TOX2Q96NM4 488 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 PNMA5Q96PV4 448 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 TRPV6Q9H1D0 765 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 DDX19AQ9NUU7 478 aaKnown RBP11.49□□□□□ -0.57
LRRC28-221ENST00000561276 CCDC39Q9UFE4 941 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 SEPT9Q9UHD8 586 aaPredicted RBP11.49□□□□□ -0.57
LRRC28-221ENST00000561276 ATP11BQ9Y2G3 1177 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 MROH7Q68CQ1 1323 aa11.49□□□□□ -0.57
LRRC28-221ENST00000561276 DCDC2CA8MYV0 355 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 ZBTB42B2RXF5 422 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 E9PMD0 336 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 TREHO43280 583 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 SLC26A4O43511 780 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 B4GALT4O60513 344 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 PQBP1O60828 265 aaKnown RBP11.48□□□□□ -0.57
LRRC28-221ENST00000561276 CMA1P23946 247 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 KLRC1P26715 233 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 HOXC8P31273 242 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 TXLNAP40222 546 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 NPEPPSP55786 919 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 RTP1P59025 263 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 TLE2Q04725 743 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 TARBP2Q15633 366 aaKnown RBP11.48□□□□□ -0.57
LRRC28-221ENST00000561276 PTGISQ16647 500 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 TRIM60Q495X7 471 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 MTERF2Q49AM1 385 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 XKR9Q5GH70 373 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 PLA2G4FQ68DD2 849 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 CLEC17AQ6ZS10 378 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 FAM126BQ8IXS8 530 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 RASSF8Q8NHQ8 419 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 CEP170P1Q96L14 293 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 CEP89Q96ST8 783 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 CYP26B1Q9NR63 512 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 ANKEF1Q9NU02 776 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 TRMT13Q9NUP7 481 aaKnown RBP11.48□□□□□ -0.57
LRRC28-221ENST00000561276 DBR1Q9UK59 544 aaKnown RBP11.48□□□□□ -0.57
LRRC28-221ENST00000561276 DNM3Q9UQ16 869 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 KDM3AQ9Y4C1 1321 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 COL1A2P08123 1366 aa11.48□□□□□ -0.57
LRRC28-221ENST00000561276 GOLGA6L4A6NEF3 574 aa11.47□□□□□ -0.57
LRRC28-221ENST00000561276 TLR3O15455 904 aaKnown RBP11.47□□□□□ -0.57
LRRC28-221ENST00000561276 CD4P01730 458 aa11.47□□□□□ -0.57
LRRC28-221ENST00000561276 RARRES1P49788 294 aa11.47□□□□□ -0.57
LRRC28-221ENST00000561276 FAAP100Q0VG06 881 aa11.47□□□□□ -0.57
LRRC28-221ENST00000561276 CSPP1Q1MSJ5 1256 aa11.47□□□□□ -0.57
LRRC28-221ENST00000561276 RRAGBQ5VZM2 374 aa11.47□□□□□ -0.57
LRRC28-221ENST00000561276 RESP18Q5W5W9 173 aa11.47□□□□□ -0.57
LRRC28-221ENST00000561276 MTHFD1LQ6UB35 978 aa11.47□□□□□ -0.57
LRRC28-221ENST00000561276 KCNK18Q7Z418 384 aa11.47□□□□□ -0.57
LRRC28-221ENST00000561276 IFNLR1Q8IU57 520 aaPredicted RBP11.47□□□□□ -0.57
LRRC28-221ENST00000561276 KCTD17Q8N5Z5 321 aa11.47□□□□□ -0.57
LRRC28-221ENST00000561276 PDILTQ8N807 584 aa11.47□□□□□ -0.57
LRRC28-221ENST00000561276 ZBTB10Q96DT7 871 aa11.47□□□□□ -0.57
LRRC28-221ENST00000561276 HTATIP2Q9BUP3 242 aa11.47□□□□□ -0.57
LRRC28-221ENST00000561276 FAM13BQ9NYF5 915 aa11.47□□□□□ -0.57
LRRC28-221ENST00000561276 TUBE1Q9UJT0 475 aa11.47□□□□□ -0.57
LRRC28-221ENST00000561276 NOD1Q9Y239 953 aa11.47□□□□□ -0.57
LRRC28-221ENST00000561276 A0A087X0B3 334 aa11.46□□□□□ -0.57
LRRC28-221ENST00000561276 A0A1B0GVL5 298 aa11.46□□□□□ -0.57
LRRC28-221ENST00000561276 MBLAC1A4D2B0 266 aaPredicted RBP11.46□□□□□ -0.57
LRRC28-221ENST00000561276 MAGEB2O15479 319 aa11.46□□□□□ -0.57
LRRC28-221ENST00000561276 MAFO75444 373 aaPredicted RBP11.46□□□□□ -0.57
LRRC28-221ENST00000561276 EYA4O95677 639 aa11.46□□□□□ -0.57
LRRC28-221ENST00000561276 CYP2C9P11712 490 aa11.46□□□□□ -0.57
LRRC28-221ENST00000561276 PLCG1P19174 1290 aa11.46□□□□□ -0.57
LRRC28-221ENST00000561276 TBC1D8BQ0IIM8 1120 aa11.46□□□□□ -0.57
LRRC28-221ENST00000561276 DHX8Q14562 1220 aaKnown RBP11.46□□□□□ -0.57
LRRC28-221ENST00000561276 TMEM119Q4V9L6 283 aa11.46□□□□□ -0.57
LRRC28-221ENST00000561276 EFCAB12Q6NXP0 572 aa11.46□□□□□ -0.57
LRRC28-221ENST00000561276 SERINC5Q86VE9 423 aa11.46□□□□□ -0.57
LRRC28-221ENST00000561276 DPF3Q92784 378 aa11.46□□□□□ -0.57
LRRC28-221ENST00000561276 CCDC43Q96MW1 224 aaKnown RBP11.46□□□□□ -0.57
LRRC28-221ENST00000561276 CTAGE1Q96RT6 745 aa11.46□□□□□ -0.57
LRRC28-221ENST00000561276 BHMT2Q9H2M3 363 aa11.46□□□□□ -0.57
LRRC28-221ENST00000561276 SUGCTQ9HAC7 445 aa11.46□□□□□ -0.57
LRRC28-221ENST00000561276 PCDHA2Q9Y5H9 948 aa11.46□□□□□ -0.57
LRRC28-221ENST00000561276 MYH11P35749 1972 aa11.45□□□□□ -0.58
LRRC28-221ENST00000561276 A0A1W2PQ27 194 aa11.45□□□□□ -0.58
LRRC28-221ENST00000561276 A0A1W2PQ64 194 aa11.45□□□□□ -0.58
LRRC28-221ENST00000561276 A0A1W2PQD8 194 aa11.45□□□□□ -0.58
LRRC28-221ENST00000561276 ARHGEF35A5YM69 484 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms