RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 SAAL1Q96ER3 474 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 SEMA6BQ9H3T3 888 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 SLC39A2Q9NP94 309 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 SLC12A6Q9UHW9 1150 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 CFAP73A6NFT4 308 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 B4DLN1 442 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 NDUFB10O96000 172 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 USP11P51784 963 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 JAG1P78504 1218 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 ELF3P78545 371 aaPredicted RBP15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 ECM1Q16610 540 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 CFAP221Q4G0U5 840 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 CENPPQ6IPU0 288 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 GJA10Q969M2 543 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 PRMT6Q96LA8 375 aaPredicted RBP15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 CNOT6LQ96LI5 555 aaKnown RBP15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 ANO3Q9BYT9 981 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 LRRC27Q9C0I9 530 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 C15orf41Q9Y2V0 281 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 CYP3A7-CYP3A51PA0A087WV96 503 aa15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 GRID2IPA4D2P6 1211 aa15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 GCOM1H8Y6P7 765 aaPredicted RBP15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 PPIP5K2O43314 1243 aa15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 MARCH6O60337 910 aa15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 MYZAPP0CAP1 466 aa15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 CYP3A7P24462 503 aa15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 HOXA7P31268 230 aaPredicted RBP15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 HYIQ5T013 277 aa15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 AGBL2Q5U5Z8 902 aa15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 DYMQ7RTS9 669 aa15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 LMBR1Q8WVP7 490 aa15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 CCT6BQ92526 530 aa15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 HVCN1Q96D96 273 aa15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 MBOAT7Q96N66 472 aa15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 SPAG5Q96R06 1193 aa15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 PPANQ9NQ55 473 aaKnown RBP15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 PCDHA12Q9UN75 941 aa15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 TFR2Q9UP52 801 aa15.23■□□□□ 0.03
RABGGTA-220ENST00000560998 MEIS2O14770 477 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 LCA5LO95447 670 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 GH2P01242 217 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 SSBP05455 408 aaKnown RBP eCLIP15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 HNRNPH3P31942 346 aaKnown RBP15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 EHHADHQ08426 723 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 AP3B2Q13367 1082 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 RRP1BQ14684 758 aaKnown RBP15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 RBM26Q5T8P6 1007 aaKnown RBP15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 GUF1Q8N442 669 aaKnown RBP15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 DDX12PQ92771 950 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 SPDL1Q96EA4 605 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 AMNQ9BXJ7 453 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 MOV10L1Q9BXT6 1211 aaKnown RBP15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 KCNMB3Q9NPA1 279 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 NFU1Q9UMS0 254 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 TRPC6Q9Y210 931 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 CAPN6Q9Y6Q1 641 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 HEXIM1O94992 359 aaKnown RBP15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 TRIM21P19474 475 aaKnown RBP15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 MTIF2P46199 727 aaKnown RBP15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 SNAP25P60880 206 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 PSMD2Q13200 908 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 MIIPQ5JXC2 388 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 SYDE2Q5VT97 1194 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 MOXD1Q6UVY6 613 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 CCDC26Q8TAB7 109 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 CRYGNQ8WXF5 182 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 EEF2KMTQ96G04 330 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 CCDC42Q96M95 316 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 IFIH1Q9BYX4 1025 aaKnown RBP15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 RBM12Q9NTZ6 932 aaKnown RBP15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 STK32BQ9NY57 414 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 PLAAQ9Y263 795 aa15.22■□□□□ 0.03
RABGGTA-220ENST00000560998 KDM3AQ9Y4C1 1321 aa15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 FRMD3A2A2Y4 597 aa15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 RASSF10A6NK89 507 aa15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 PJA2O43164 708 aa15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 SLC26A4O43511 780 aa15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 PPP1R12BO60237 982 aaPredicted RBP15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 SNUPNO95149 360 aaKnown RBP15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 MATR3P43243 847 aaKnown RBP eCLIP15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 CARSP49589 748 aaKnown RBP15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 TRAF1Q13077 416 aa15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 NFRKBQ6P4R8 1299 aa15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 BZW1Q7L1Q6 419 aaKnown RBP15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 MAATS1Q7Z4T9 603 aa15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 FBXO11Q86XK2 927 aa15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 NSMCE1Q8WV22 266 aa15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 LRRC45Q96CN5 670 aa15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 DNAJC19Q96DA6 116 aa15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 CSRNP1Q96S65 589 aa15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 P2RX7Q99572 595 aaKnown RBP15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 TAF1DQ9H5J8 278 aaPredicted RBP15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 CORO1CQ9ULV4 474 aaPredicted RBP15.21■□□□□ 0.03
RABGGTA-220ENST00000560998 ECM2O94769 699 aaPredicted RBP15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 RPSAP08865 295 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 BMP3P12645 472 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 CAPRIN2Q6IMN6 1127 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 BTNL9Q6UXG8 535 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 RNF10Q8N5U6 811 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 ANKRD27Q96NW4 1050 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms