RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 FEZF2Q8TBJ5 459 aa11.39□□□□□ -0.59
TPM1-225ENST00000560679 MRPS27Q92552 414 aaKnown RBP11.39□□□□□ -0.59
TPM1-225ENST00000560679 SMARCAD1Q9H4L7 1026 aa11.39□□□□□ -0.59
TPM1-225ENST00000560679 CDHR5Q9HBB8 845 aa11.39□□□□□ -0.59
TPM1-225ENST00000560679 ENTPD7Q9NQZ7 604 aa11.39□□□□□ -0.59
TPM1-225ENST00000560679 RNF19AQ9NV58 838 aa11.39□□□□□ -0.59
TPM1-225ENST00000560679 TYW1Q9NV66 732 aaKnown RBP11.39□□□□□ -0.59
TPM1-225ENST00000560679 PCDHA2Q9Y5H9 948 aa11.39□□□□□ -0.59
TPM1-225ENST00000560679 SMIM35A0A1B0GVV1 85 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 M0QZ92 97 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 HOXB8P17481 243 aaPredicted RBP11.38□□□□□ -0.59
TPM1-225ENST00000560679 PDE4AP27815 886 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 PBX3P40426 434 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 PLCB3Q01970 1234 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 PLCB4Q15147 1175 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 MCTP2Q6DN12 878 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 B4GALNT3Q6L9W6 998 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 LRRC55Q6ZSA7 311 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 SMARCC2Q8TAQ2 1214 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 CDHR1Q96JP9 859 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 ADAM2Q99965 735 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 LNPKQ9C0E8 428 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 AAASQ9NRG9 546 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 RGS18Q9NS28 235 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 NOC2LQ9Y3T9 749 aaKnown RBP11.38□□□□□ -0.59
TPM1-225ENST00000560679 PCDHB7Q9Y5E2 793 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 HCFC2Q9Y5Z7 792 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 UBIAD1Q9Y5Z9 338 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 TAF6LQ9Y6J9 622 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 CACNA1BQ00975 2339 aa11.38□□□□□ -0.59
TPM1-225ENST00000560679 CEP250Q9BV73 2442 aa11.37□□□□□ -0.59
TPM1-225ENST00000560679 WEE2P0C1S8 567 aa11.37□□□□□ -0.59
TPM1-225ENST00000560679 LAG3P18627 525 aa11.37□□□□□ -0.59
TPM1-225ENST00000560679 KRT76Q01546 638 aa11.37□□□□□ -0.59
TPM1-225ENST00000560679 NFX1Q12986 1120 aaKnown RBP11.37□□□□□ -0.59
TPM1-225ENST00000560679 MTMR1Q13613 665 aa11.37□□□□□ -0.59
TPM1-225ENST00000560679 MTHFD1LQ6UB35 978 aa11.37□□□□□ -0.59
TPM1-225ENST00000560679 SLC24A5Q71RS6 500 aa11.37□□□□□ -0.59
TPM1-225ENST00000560679 ADAM7Q9H2U9 754 aa11.37□□□□□ -0.59
TPM1-225ENST00000560679 JPH1Q9HDC5 661 aaPredicted RBP11.37□□□□□ -0.59
TPM1-225ENST00000560679 C1orf112Q9NSG2 853 aa11.37□□□□□ -0.59
TPM1-225ENST00000560679 ZBTB47Q9UFB7 747 aaPredicted RBP11.37□□□□□ -0.59
TPM1-225ENST00000560679 DENND3A2RUS2 1198 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 PI15O43692 258 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 RPS6KA5O75582 802 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 NPR3P17342 541 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 CLCN5P51795 746 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 HDAC1Q13547 482 aaPredicted RBP11.36□□□□□ -0.59
TPM1-225ENST00000560679 DSC3Q14574 896 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 UBE2SQ16763 222 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 TPRNQ4KMQ1 711 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 KANK3Q6NY19 840 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 FAM228AQ86W67 206 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 ZDHHC14Q8IZN3 488 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 TDRD5Q8NAT2 981 aaKnown RBP11.36□□□□□ -0.59
TPM1-225ENST00000560679 CASP10Q92851 521 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 RMDN1Q96DB5 314 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 NECTIN4Q96NY8 510 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 CASD1Q96PB1 797 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 SPZ1Q9BXG8 430 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 NGRNQ9NPE2 291 aaKnown RBP11.36□□□□□ -0.59
TPM1-225ENST00000560679 DIAPH3Q9NSV4 1193 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 TMEM161AQ9NX61 479 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 ST3GAL5Q9UNP4 418 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 GINS2Q9Y248 185 aa11.36□□□□□ -0.59
TPM1-225ENST00000560679 OTOGLQ3ZCN5 2332 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 C2orf71A6NGG8 1288 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 IFIT3O14879 490 aaKnown RBP11.35□□□□□ -0.59
TPM1-225ENST00000560679 CLASP2O75122 1294 aaKnown RBP11.35□□□□□ -0.59
TPM1-225ENST00000560679 AOC1P19801 751 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 ACTR2P61160 394 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 FAM189BP81408 668 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 ITIH3Q06033 890 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 ANGPT1Q15389 498 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 KIAA1841Q6NSI8 718 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 KCNT2Q6UVM3 1135 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 PLEKHM2Q8IWE5 1019 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 CCDC105Q8IYK2 499 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 KIAA0319LQ8IZA0 1049 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 NME8Q8N427 588 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 C12orf76Q8N812 135 aaPredicted RBP11.35□□□□□ -0.59
TPM1-225ENST00000560679 FLCNQ8NFG4 579 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 CUL5Q93034 780 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 CCDC136Q96JN2 1154 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 MFSD1Q9H3U5 465 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 JADE2Q9NQC1 790 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 SLC9A2Q9UBY0 812 aa11.35□□□□□ -0.59
TPM1-225ENST00000560679 C2orf16Q68DN1 1984 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 ZBTB42B2RXF5 422 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 KLRC1P26715 233 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 MTHFRP42898 656 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 ANTXR2P58335 489 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 ITGB3BPQ13352 177 aaPredicted RBP11.34□□□□□ -0.59
TPM1-225ENST00000560679 SMC1AQ14683 1233 aaKnown RBP11.34□□□□□ -0.59
TPM1-225ENST00000560679 WTAPQ15007 396 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 KIZQ2M2Z5 673 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 RARS2Q5T160 578 aaKnown RBP11.34□□□□□ -0.59
TPM1-225ENST00000560679 CES5AQ6NT32 575 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 PLPPR4Q7Z2D5 763 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 TMC7Q7Z402 723 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms