RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 BZW1Q7L1Q6 419 aaKnown RBP13.58□□□□□ -0.24
SYNM-203ENST00000560674 NLRP10Q86W26 655 aa13.58□□□□□ -0.24
SYNM-203ENST00000560674 RYBPQ8N488 228 aaPredicted RBP13.58□□□□□ -0.24
SYNM-203ENST00000560674 FBXL13Q8NEE6 735 aa13.58□□□□□ -0.24
SYNM-203ENST00000560674 FAF2Q96CS3 445 aa13.58□□□□□ -0.24
SYNM-203ENST00000560674 GGCXP38435 758 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 TMPRSS15P98073 1019 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 WDR75Q8IWA0 830 aaKnown RBP13.57□□□□□ -0.24
SYNM-203ENST00000560674 TRIML2Q8N7C3 387 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 PSPC1Q8WXF1 523 aaKnown RBP13.57□□□□□ -0.24
SYNM-203ENST00000560674 TTC17Q96AE7 1141 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 NOC2LQ9Y3T9 749 aaKnown RBP13.57□□□□□ -0.24
SYNM-203ENST00000560674 TMED1Q13445 227 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 TOB2Q14106 344 aaPredicted RBP13.57□□□□□ -0.24
SYNM-203ENST00000560674 TRMT10CQ7L0Y3 403 aaKnown RBP13.57□□□□□ -0.24
SYNM-203ENST00000560674 DPP9Q86TI2 863 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 NLGN1Q8N2Q7 840 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 CALR3Q96L12 384 aaKnown RBP13.57□□□□□ -0.24
SYNM-203ENST00000560674 KLC2Q9H0B6 622 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 ABCA8O94911 1581 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 OCRLQ01968 901 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 NR1H3Q13133 447 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 PROM2Q8N271 834 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 HSPH1Q92598 858 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 DHX38Q92620 1227 aaKnown RBP13.57□□□□□ -0.24
SYNM-203ENST00000560674 MSTO1Q9BUK6 570 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 UBN1Q9NPG3 1134 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 ATP8B3O60423 1300 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 SAMD9LQ8IVG5 1584 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 GYG2O15488 501 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 OSTNP61366 133 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 CDR2Q01850 454 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 MECOMQ03112 1051 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 LRRC23Q53EV4 343 aaPredicted RBP13.57□□□□□ -0.24
SYNM-203ENST00000560674 ABI1Q8IZP0 508 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 RBM41Q96IZ5 413 aaKnown RBP13.57□□□□□ -0.24
SYNM-203ENST00000560674 SUDS3Q9H7L9 328 aaPredicted RBP13.57□□□□□ -0.24
SYNM-203ENST00000560674 PPARGC1AQ9UBK2 798 aaKnown RBP13.57□□□□□ -0.24
SYNM-203ENST00000560674 STK36Q9NRP7 1315 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 PTCH1Q13635 1447 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 RASA4BC9J798 803 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 RASA4O43374 803 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 MDM2Q00987 491 aaPredicted RBP13.57□□□□□ -0.24
SYNM-203ENST00000560674 RASGRF1Q13972 1273 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 NBPF9Q3BBW0 867 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 TAF1BQ53T94 588 aaPredicted RBP13.57□□□□□ -0.24
SYNM-203ENST00000560674 SLFN12LQ6IEE8 588 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 GIPC2Q8TF65 315 aa13.57□□□□□ -0.24
SYNM-203ENST00000560674 KRT39Q6A163 491 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 DGKHQ86XP1 1220 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 MXD3Q9BW11 206 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 RPF1Q9H9Y2 349 aaKnown RBP13.56□□□□□ -0.24
SYNM-203ENST00000560674 PLEKHG1Q9ULL1 1385 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 LRRC53A6NM62 1247 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 KRT10P13645 584 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 TSC22D3Q99576 134 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 PI4KBQ9UBF8 816 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 ANAPC7Q9UJX3 599 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 TRIM49BA6NDI0 452 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 BBOX1O75936 387 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 CDK8P49336 464 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 CAV1Q03135 178 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 KIF22Q14807 665 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 ARMCX2Q7L311 632 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 LCA5Q86VQ0 697 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 THOC1Q96FV9 657 aaKnown RBP13.56□□□□□ -0.24
SYNM-203ENST00000560674 OSBPL5Q9H0X9 879 aaPredicted RBP13.56□□□□□ -0.24
SYNM-203ENST00000560674 CHUKO15111 745 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 ARL13BQ3SXY8 428 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 FAM160B2Q86V87 743 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 ZC3H18Q86VM9 953 aaKnown RBP13.56□□□□□ -0.24
SYNM-203ENST00000560674 GOLPH3LQ9H4A5 285 aa13.56□□□□□ -0.24
SYNM-203ENST00000560674 CNOT8Q9UFF9 292 aaKnown RBP13.56□□□□□ -0.24
SYNM-203ENST00000560674 TAC1P20366 129 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 ZBBXA8MT70 800 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 CTIFO43310 598 aaKnown RBP13.55□□□□□ -0.24
SYNM-203ENST00000560674 AP3B2Q13367 1082 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 BEND6Q5SZJ8 279 aaPredicted RBP13.55□□□□□ -0.24
SYNM-203ENST00000560674 BRIP1Q9BX63 1249 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 ERVV-1B6SEH8 477 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 HOXA13P31271 388 aaPredicted RBP13.55□□□□□ -0.24
SYNM-203ENST00000560674 YWHAHQ04917 246 aaPredicted RBP13.55□□□□□ -0.24
SYNM-203ENST00000560674 CDO1Q16878 200 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 EPM2AIP1Q7L775 607 aaPredicted RBP13.55□□□□□ -0.24
SYNM-203ENST00000560674 HIPK4Q8NE63 616 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 VPS39Q96JC1 886 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 STRBPQ96SI9 672 aaKnown RBP13.55□□□□□ -0.24
SYNM-203ENST00000560674 ADAM22Q9P0K1 906 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 ZFP69BQ9UJL9 534 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 ZNF18P17022 549 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 LTKP29376 864 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 SOX5P35711 763 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 GPC5P78333 572 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 FSCBQ5H9T9 825 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 FAM47EQ6ZV65 393 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 TTC25Q96NG3 672 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 FAM96AQ9H5X1 160 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 KIF9Q9HAQ2 790 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 APOBEC2Q9Y235 224 aaKnown RBP13.55□□□□□ -0.24
SYNM-203ENST00000560674 FNDC3AQ9Y2H6 1198 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms