RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 FOSL2P15408 326 aa14.59□□□□□ -0.07
CTDSPL2-209ENST00000560620 TMOD1P28289 359 aa14.59□□□□□ -0.07
CTDSPL2-209ENST00000560620 MCM2P49736 904 aa14.59□□□□□ -0.07
CTDSPL2-209ENST00000560620 GRIN2CQ14957 1233 aa14.59□□□□□ -0.07
CTDSPL2-209ENST00000560620 CALCRLQ16602 461 aa14.59□□□□□ -0.07
CTDSPL2-209ENST00000560620 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.59□□□□□ -0.07
CTDSPL2-209ENST00000560620 BANK1Q8NDB2 785 aa14.59□□□□□ -0.07
CTDSPL2-209ENST00000560620 TMX3Q96JJ7 454 aa14.59□□□□□ -0.07
CTDSPL2-209ENST00000560620 GAS2L1Q99501 681 aaPredicted RBP14.59□□□□□ -0.07
CTDSPL2-209ENST00000560620 OSBPL7Q9BZF2 842 aa14.59□□□□□ -0.07
CTDSPL2-209ENST00000560620 KCNMB3Q9NPA1 279 aa14.59□□□□□ -0.07
CTDSPL2-209ENST00000560620 STXBP5LQ9Y2K9 1186 aa14.59□□□□□ -0.07
CTDSPL2-209ENST00000560620 TRPV2Q9Y5S1 764 aa14.59□□□□□ -0.07
CTDSPL2-209ENST00000560620 DDX11L8A8MPP1 907 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 ZNF862O60290 1169 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 UPP2O95045 317 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 C22orf31O95567 290 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 MCM7P33993 719 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 MGAT3Q09327 533 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 TBC1D8BQ0IIM8 1120 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 PPP2R5CQ13362 524 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 LPIN1Q14693 890 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 MTERF2Q49AM1 385 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 FBXO47Q5MNV8 452 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 EFCAB12Q6NXP0 572 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 TSHZ1Q6ZSZ6 1077 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 NME8Q8N427 588 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 FBXO18Q8NFZ0 1043 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 SCLT1Q96NL6 688 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 CELF4Q9BZC1 486 aaKnown RBP14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 PRDM12Q9H4Q4 367 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 SUGCTQ9HAC7 445 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 AKT3Q9Y243 479 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 WDR81Q562E7 1941 aa14.58□□□□□ -0.08
CTDSPL2-209ENST00000560620 ZBTB42B2RXF5 422 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 EML1O00423 815 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 MAGEB2O15479 319 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 DKC1O60832 514 aaKnown RBP eCLIP14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 CD2BP2O95400 341 aaKnown RBP14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 VTNP04004 478 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 CD52P31358 61 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 TXKP42681 527 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 CLCN3P51790 818 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 PSMC5P62195 406 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 PAK2Q13177 524 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 XKR3Q5GH77 459 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 KIAA0319LQ8IZA0 1049 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 LRRC71Q8N4P6 559 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 HAS1Q92839 578 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 MAP7D2Q96T17 732 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 SH2D3AQ9BRG2 576 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 BACH2Q9BYV9 841 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 FOXP1Q9H334 677 aaPredicted RBP14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 CERS4Q9HA82 394 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 VAV3Q9UKW4 847 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 PCDHA12Q9UN75 941 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 EVPLQ92817 2033 aa14.57□□□□□ -0.08
CTDSPL2-209ENST00000560620 MICAL3Q7RTP6 2002 aa14.56□□□□□ -0.08
CTDSPL2-209ENST00000560620 GJB5O95377 273 aa14.56□□□□□ -0.08
CTDSPL2-209ENST00000560620 IBSPP21815 317 aaPredicted RBP14.56□□□□□ -0.08
CTDSPL2-209ENST00000560620 IGFBP4P22692 258 aa14.56□□□□□ -0.08
CTDSPL2-209ENST00000560620 QARSP47897 775 aaKnown RBP14.56□□□□□ -0.08
CTDSPL2-209ENST00000560620 NFX1Q12986 1120 aaKnown RBP14.56□□□□□ -0.08
CTDSPL2-209ENST00000560620 KIZQ2M2Z5 673 aa14.56□□□□□ -0.08
CTDSPL2-209ENST00000560620 MCTP1Q6DN14 999 aa14.56□□□□□ -0.08
CTDSPL2-209ENST00000560620 B3GNT9Q6UX72 402 aa14.56□□□□□ -0.08
CTDSPL2-209ENST00000560620 NOSTRINQ8IVI9 506 aa14.56□□□□□ -0.08
CTDSPL2-209ENST00000560620 USP38Q8NB14 1042 aa14.56□□□□□ -0.08
CTDSPL2-209ENST00000560620 RAD9AQ99638 391 aa14.56□□□□□ -0.08
CTDSPL2-209ENST00000560620 TTC12Q9H892 705 aaPredicted RBP14.56□□□□□ -0.08
CTDSPL2-209ENST00000560620 NOL7Q9UMY1 257 aaKnown RBP14.56□□□□□ -0.08
CTDSPL2-209ENST00000560620 SIP14410 1827 aa14.56□□□□□ -0.08
CTDSPL2-209ENST00000560620 TMEM150BA6NC51 233 aa14.55□□□□□ -0.08
CTDSPL2-209ENST00000560620 H3BQV1 296 aa14.55□□□□□ -0.08
CTDSPL2-209ENST00000560620 WNT7AO00755 349 aa14.55□□□□□ -0.08
CTDSPL2-209ENST00000560620 P4HBP07237 508 aaKnown RBP14.55□□□□□ -0.08
CTDSPL2-209ENST00000560620 GJB2P29033 226 aa14.55□□□□□ -0.08
CTDSPL2-209ENST00000560620 DNM2P50570 870 aa14.55□□□□□ -0.08
CTDSPL2-209ENST00000560620 CYP4A11Q02928 519 aa14.55□□□□□ -0.08
CTDSPL2-209ENST00000560620 TMEM266Q2M3C6 531 aa14.55□□□□□ -0.08
CTDSPL2-209ENST00000560620 PLA2G4FQ68DD2 849 aa14.55□□□□□ -0.08
CTDSPL2-209ENST00000560620 YME1L1Q96TA2 773 aa14.55□□□□□ -0.08
CTDSPL2-209ENST00000560620 OSMRQ99650 979 aa14.55□□□□□ -0.08
CTDSPL2-209ENST00000560620 AGO3Q9H9G7 860 aaKnown RBP14.55□□□□□ -0.08
CTDSPL2-209ENST00000560620 PADI3Q9ULW8 664 aa14.55□□□□□ -0.08
CTDSPL2-209ENST00000560620 SMC3Q9UQE7 1217 aa14.55□□□□□ -0.08
CTDSPL2-209ENST00000560620 INSL6Q9Y581 213 aa14.55□□□□□ -0.08
CTDSPL2-209ENST00000560620 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.55□□□□□ -0.08
CTDSPL2-209ENST00000560620 PTPRSQ13332 1948 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 LOXHD1Q8IVV2 1947 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 LCHNA4D1U4 455 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 RPS6KA5O75582 802 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 NLRP11P59045 1033 aaKnown RBP14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 CTTNQ14247 550 aaKnown RBP14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 EPHA7Q15375 998 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 ZNF174Q15697 407 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 TTC38Q5R3I4 469 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 ODR4Q5SWX8 454 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 TPH2Q8IWU9 490 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms