RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 GJB4Q9NTQ9 266 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 STX8Q9UNK0 236 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 BZW2Q9Y6E2 419 aaKnown RBP9.37□□□□□ -0.91
CCDC33-209ENST00000560565 CAPN7Q9Y6W3 813 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 TRIOBPQ9H2D6 2365 aa9.37□□□□□ -0.91
CCDC33-209ENST00000560565 CNTNAP5Q8WYK1 1306 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 CCDC194A0A1B0GVG4 234 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 BTNL10A8MVZ5 291 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 CCDC188H7C350 402 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 hCG_1984214I3L0E3 225 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 AGPSO00116 658 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 PDHXO00330 501 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 NMT2O60551 498 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 ASNSP08243 561 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 SNHG28P0DPA3 235 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 SCG2P13521 617 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 RXRAP19793 462 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 NAP1L1P55209 391 aaKnown RBP9.36□□□□□ -0.91
CCDC33-209ENST00000560565 SP3Q02447 781 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 FUT2Q10981 343 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 NR5A1Q13285 461 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 MAPK8IP2Q13387 824 aaPredicted RBP9.36□□□□□ -0.91
CCDC33-209ENST00000560565 RRP1BQ14684 758 aaKnown RBP9.36□□□□□ -0.91
CCDC33-209ENST00000560565 CRYMQ14894 314 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 PKN2Q16513 984 aaKnown RBP9.36□□□□□ -0.91
CCDC33-209ENST00000560565 ABCB5Q2M3G0 1257 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 SLC9C1Q4G0N8 1177 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 CCDC40Q4G0X9 1142 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 AGBL2Q5U5Z8 902 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 ANKRD23Q86SG2 305 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 RAB11FIP4Q86YS3 637 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 CREG2Q8IUH2 290 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 GRAMD1CQ8IYS0 662 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 ZNF713Q8N859 430 aaPredicted RBP9.36□□□□□ -0.91
CCDC33-209ENST00000560565 DAGLBQ8NCG7 672 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 RSRC1Q96IZ7 334 aaKnown RBP9.36□□□□□ -0.91
CCDC33-209ENST00000560565 EPSTI1Q96J88 318 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 PBKQ96KB5 322 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 CAPZA3Q96KX2 299 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 MED15Q96RN5 788 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 SPZ1Q9BXG8 430 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 TTYH3Q9C0H2 523 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 NSRP1Q9H0G5 558 aaKnown RBP9.36□□□□□ -0.91
CCDC33-209ENST00000560565 DNAJC18Q9H819 358 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 SUGCTQ9HAC7 445 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 GDF3Q9NR23 364 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 DIS3Q9Y2L1 958 aaKnown RBP9.36□□□□□ -0.91
CCDC33-209ENST00000560565 REXO2Q9Y3B8 237 aaKnown RBP9.36□□□□□ -0.91
CCDC33-209ENST00000560565 DAAM1Q9Y4D1 1078 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 PCDHA13Q9Y5I0 950 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 MYH7BA7E2Y1 1941 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 HTTP42858 3142 aa9.36□□□□□ -0.91
CCDC33-209ENST00000560565 GRIN2DO15399 1336 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 A0A0G2JLL6 359 aaPredicted RBP9.35□□□□□ -0.91
CCDC33-209ENST00000560565 PVALEFA0A1B0GWK0 134 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 CFAP73A6NFT4 308 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 USP17L5A8MUK1 530 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 TLR2O60603 784 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 GSTA1P08263 222 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 LSP1P33241 339 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 MDH1P40925 334 aaKnown RBP9.35□□□□□ -0.91
CCDC33-209ENST00000560565 PRCPP42785 496 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 MAGEA1P43355 309 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 SLC8A3P57103 927 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 SPP2Q13103 211 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 MOGSQ13724 837 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 ARHGEF6Q15052 776 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 PTGISQ16647 500 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 MAN2A1Q16706 1144 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 PFKFB3Q16875 520 aaPredicted RBP9.35□□□□□ -0.91
CCDC33-209ENST00000560565 PREPLQ4J6C6 727 aaPredicted RBP9.35□□□□□ -0.91
CCDC33-209ENST00000560565 GPATCH4Q5T3I0 446 aaKnown RBP9.35□□□□□ -0.91
CCDC33-209ENST00000560565 GKAP1Q5VSY0 366 aaPredicted RBP9.35□□□□□ -0.91
CCDC33-209ENST00000560565 GADL1Q6ZQY3 521 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 MAATS1Q7Z4T9 603 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 PRRT2Q7Z6L0 340 aaPredicted RBP9.35□□□□□ -0.91
CCDC33-209ENST00000560565 HOOK3Q86VS8 718 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 NLRP14Q86W24 1093 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 APLFQ8IW19 511 aaPredicted RBP9.35□□□□□ -0.91
CCDC33-209ENST00000560565 GPATCH11Q8N954 259 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 ZNF280CQ8ND82 737 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 CCDC26Q8TAB7 109 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 DCAF4Q8WV16 495 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 CALML4Q96GE6 196 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 CCDC114Q96M63 670 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 NAP1L3Q99457 506 aaPredicted RBP9.35□□□□□ -0.91
CCDC33-209ENST00000560565 NAP1L4Q99733 375 aaKnown RBP9.35□□□□□ -0.91
CCDC33-209ENST00000560565 FAM129AQ9BZQ8 928 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 AS3MTQ9HBK9 375 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 KLC4Q9NSK0 619 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 KBTBD4Q9NVX7 518 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.35□□□□□ -0.91
CCDC33-209ENST00000560565 STK17AQ9UEE5 414 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 MAD2L2Q9UI95 211 aa9.35□□□□□ -0.91
CCDC33-209ENST00000560565 RBBP6Q7Z6E9 1792 aaKnown RBP9.35□□□□□ -0.91
CCDC33-209ENST00000560565 SMCHD1A6NHR9 2005 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 MACROD2A1Z1Q3 448 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 GMNCA6NCL1 334 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 RBAK-RBAKDNI3L0D1 243 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 MPHOSPH10O00566 681 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms