RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 FBXL6Q8N531 539 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 NEK1Q96PY6 1258 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 PPP1R16BQ96T49 567 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 LZTS2Q9BRK4 669 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 APOL5Q9BWW9 433 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 PHF7Q9BWX1 381 aaPredicted RBP12□□□□□ -0.49
CDC42BPB-207ENST00000560492 CELF4Q9BZC1 486 aaKnown RBP12□□□□□ -0.49
CDC42BPB-207ENST00000560492 TLR9Q9NR96 1032 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 TSHZ2Q9NRE2 1034 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 MYH9P35579 1960 aaKnown RBP11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 LOC730098B7Z3J9 87 aa11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 DDX39AO00148 427 aaKnown RBP11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 BACH1O14867 736 aa11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 GLP2RO95838 553 aa11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 COASYQ13057 564 aa11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 PLPP4Q5VZY2 271 aa11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 LLGL2Q6P1M3 1020 aa11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 BMP8AQ7Z5Y6 402 aa11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 RTN4RL1Q86UN2 441 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 ATOH1Q92858 354 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 JADE2Q9NQC1 790 aa11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 ENTPD7Q9NQZ7 604 aa11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 TMEM260Q9NX78 707 aa11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 PCDHA6Q9UN73 950 aa11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 PCDHA8Q9Y5H6 950 aa11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 UBIAD1Q9Y5Z9 338 aa11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 TAF6LQ9Y6J9 622 aa11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 SQORQ9Y6N5 450 aa11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 IGSF9BQ9UPX0 1349 aa11.99□□□□□ -0.49
CDC42BPB-207ENST00000560492 FSD2A1L4K1 749 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 PRC1O43663 620 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 GFRA3O60609 400 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 RPS6KA5O75582 802 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 FGF18O76093 207 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 TECP42680 631 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 SARSP49591 514 aaKnown RBP11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 STAT5BP51692 787 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 ANTXR2P58335 489 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 ACTR2P61160 394 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 RBM10P98175 930 aaKnown RBP11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 SIGLEC14Q08ET2 396 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 PLCB4Q15147 1175 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 ODR4Q5SWX8 454 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 TTC22Q5TAA0 569 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 TRMT1LQ7Z2T5 733 aaKnown RBP11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 IGDCC4Q8TDY8 1250 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 ADAM2Q99965 735 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 LY9Q9HBG7 655 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 TCEAL9Q9UHQ7 104 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 PCDHA2Q9Y5H9 948 aa11.98□□□□□ -0.49
CDC42BPB-207ENST00000560492 SMIM35A0A1B0GVV1 85 aa11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 MAFGO15525 162 aa11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 ZNF76P36508 570 aa11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 VCPP55072 806 aaKnown RBP11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 UBE3AQ05086 875 aa11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 APOBRQ0VD83 1088 aa11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 FAM160B1Q5W0V3 765 aa11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 MTHFD1LQ6UB35 978 aa11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 CKAP2LQ8IYA6 745 aa11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 MB21D2Q8IYB1 491 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 SRBD1Q8N5C6 995 aaKnown RBP11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 EXOC6Q8TAG9 804 aa11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 PGBD1Q96JS3 809 aa11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 SNX27Q96L92 541 aa11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 PCYT2Q99447 389 aa11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 MAP3K14Q99558 947 aa11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 MXRA8Q9BRK3 442 aa11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 ATP6V0A4Q9HBG4 840 aa11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 KCNH7Q9NS40 1196 aa11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 PUF60Q9UHX1 559 aaKnown RBP11.97□□□□□ -0.49
CDC42BPB-207ENST00000560492 CALM1P0DP23 149 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 CALM2P0DP24 149 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 CALM3P0DP25 149 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 GSPT1P15170 499 aaKnown RBP11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 CHMLP26374 656 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 KLRC1P26715 233 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 NAPAP54920 295 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 TCF15Q12870 199 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 CBX2Q14781 532 aaPredicted RBP11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 FAM102BQ5T8I3 360 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 MICU3Q86XE3 530 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 ABI1Q8IZP0 508 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 TMTC2Q8N394 836 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 NME8Q8N427 588 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 COLGALT1Q8NBJ5 622 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 CDCA3Q99618 268 aaPredicted RBP11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 IRF2BPLQ9H1B7 796 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 TMX1Q9H3N1 280 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 C1orf112Q9NSG2 853 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 TYW1Q9NV66 732 aaKnown RBP11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 HCSTQ9UBK5 93 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 NOC2LQ9Y3T9 749 aaKnown RBP11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 RBM8AQ9Y5S9 174 aaKnown RBP11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 SLC12A7Q9Y666 1083 aa11.96□□□□□ -0.49
CDC42BPB-207ENST00000560492 ZDBF2Q9HCK1 2354 aa11.95□□□□□ -0.5
CDC42BPB-207ENST00000560492 H0Y858 1186 aa11.95□□□□□ -0.5
CDC42BPB-207ENST00000560492 GPR182O15218 404 aa11.95□□□□□ -0.5
CDC42BPB-207ENST00000560492 MGEA5O60502 916 aa11.95□□□□□ -0.5
CDC42BPB-207ENST00000560492 CENPBP07199 599 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms