RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 EIF4A3P38919 411 aaKnown RBP10.67□□□□□ -0.7
RTF1-206ENST00000560447 KLK7P49862 253 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 USP14P54578 494 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 CXCL9Q07325 125 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 PABPC4Q13310 644 aaKnown RBP eCLIP10.67□□□□□ -0.7
RTF1-206ENST00000560447 RINT1Q6NUQ1 792 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 C1orf186Q6ZWK4 172 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 RRAGAQ7L523 313 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 SFR1Q86XK3 245 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 SLC9A9Q8IVB4 645 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 SLC17A8Q8NDX2 589 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 JDP2Q8WYK2 163 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 WDR18Q9BV38 432 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 PARD6BQ9BYG5 372 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 GANQ9H2C0 597 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 BHMT2Q9H2M3 363 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 PARVGQ9HBI0 331 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 MYOZ2Q9NPC6 264 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 ZNF277Q9NRM2 450 aaPredicted RBP10.67□□□□□ -0.7
RTF1-206ENST00000560447 FAM207AQ9NSI2 230 aaPredicted RBP10.67□□□□□ -0.7
RTF1-206ENST00000560447 ZNF446Q9NWS9 450 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 PCDHA13Q9Y5I0 950 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 FHOD1Q9Y613 1164 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 SHTN1A0MZ66 631 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 PHF20L1A8MW92 1017 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 EML1O00423 815 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 WNT10BO00744 389 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 ARHGAP33O14559 1287 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 XRCC5P13010 732 aaKnown RBP10.66□□□□□ -0.7
RTF1-206ENST00000560447 HOXA13P31271 388 aaPredicted RBP10.66□□□□□ -0.7
RTF1-206ENST00000560447 PRKCIP41743 596 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 MAGEA1P43355 309 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 PSMC6P62333 389 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 CBX1P83916 185 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 KCNH2Q12809 1159 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 GPS2Q13227 327 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 PPP2R5AQ15172 486 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 KIAA1755Q5JYT7 1200 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 PCNX4Q63HM2 1172 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 DCAF15Q66K64 600 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 HGSNATQ68CP4 663 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 CCDC70Q6NSX1 233 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 SPICE1Q8N0Z3 855 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 GLIS3Q8NEA6 775 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 RDM1Q8NG50 284 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 GJA10Q969M2 543 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 ZNF577Q9BSK1 485 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 LSM14BQ9BX40 385 aaKnown RBP10.66□□□□□ -0.7
RTF1-206ENST00000560447 TAOK3Q9H2K8 898 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 TBC1D22BQ9NU19 505 aa10.66□□□□□ -0.7
RTF1-206ENST00000560447 DBR1Q9UK59 544 aaKnown RBP10.66□□□□□ -0.7
RTF1-206ENST00000560447 LOC285556D6RIA3 1793 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 A0A0U1RQJ8 604 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 EPHB6O15197 1021 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 NOL4O94818 638 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 NR3C1P04150 777 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 ZSCAN20P17040 1043 aaPredicted RBP10.65□□□□□ -0.7
RTF1-206ENST00000560447 RFX1P22670 979 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 PSMC2P35998 433 aaKnown RBP10.65□□□□□ -0.7
RTF1-206ENST00000560447 SNAP25P60880 206 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 SLC18A3Q16572 532 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 IFI16Q16666 785 aaKnown RBP10.65□□□□□ -0.7
RTF1-206ENST00000560447 MAP9Q49MG5 647 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 DALRD3Q5D0E6 543 aaKnown RBP10.65□□□□□ -0.7
RTF1-206ENST00000560447 CCDC174Q6PII3 467 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 GBP6Q6ZN66 633 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 HS2ST1Q7LGA3 356 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 NELFCDQ8IXH7 590 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 C12orf56Q8IXR9 622 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 ATRIPQ8WXE1 791 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 UPF1Q92900 1129 aaKnown RBP eCLIP10.65□□□□□ -0.7
RTF1-206ENST00000560447 DDX27Q96GQ7 796 aaKnown RBP10.65□□□□□ -0.7
RTF1-206ENST00000560447 DYDC2Q96IM9 177 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 RUSC1Q9BVN2 902 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 UBXN6Q9BZV1 441 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 TMEM39BQ9GZU3 492 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 LACRTQ9GZZ8 138 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 ACBD3Q9H3P7 528 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 ST6GALNAC4Q9H4F1 302 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 ANKZF1Q9H8Y5 726 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 AS3MTQ9HBK9 375 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 SLC38A10Q9HBR0 1119 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 INTUQ9ULD6 942 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 CCPG1Q9ULG6 757 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 SNX12Q9UMY4 172 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 HYOU1Q9Y4L1 999 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 UBIAD1Q9Y5Z9 338 aa10.65□□□□□ -0.7
RTF1-206ENST00000560447 WDR81Q562E7 1941 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 ASTN1O14525 1302 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 ZNF536O15090 1300 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 PHIPQ8WWQ0 1821 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 NPHP3-ACAD11A0A0J9YXS1 232 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 IPO5O00410 1097 aaKnown RBP10.64□□□□□ -0.71
RTF1-206ENST00000560447 CES2O00748 559 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 MAP2K7O14733 419 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 ZNF263O14978 683 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 MAPK13O15264 365 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 EIF3JO75822 258 aaKnown RBP10.64□□□□□ -0.71
RTF1-206ENST00000560447 CLSTN1O94985 981 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 GCNT3O95395 438 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms