RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 VTNP04004 478 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 GHRP10912 638 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 CDC25AP30304 524 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 TRAPPC10P48553 1259 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 SPIRE1Q08AE8 756 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 MBTPS1Q14703 1052 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 ZRSR1Q15695 479 aaKnown RBP9.59□□□□□ -0.87
USP3-217ENST00000560070 IL17AQ16552 155 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 KIZQ2M2Z5 673 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 TMEM266Q2M3C6 531 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 RILPL1Q5EBL4 403 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 XKR9Q5GH70 373 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 FAM109BQ6ICB4 259 aaPredicted RBP9.59□□□□□ -0.87
USP3-217ENST00000560070 FAM117BQ6P1L5 589 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 DTHD1Q6ZMT9 781 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 ANO5Q75V66 913 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 TMCO2Q7Z6W1 182 aaPredicted RBP9.59□□□□□ -0.87
USP3-217ENST00000560070 KIAA0319LQ8IZA0 1049 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 DBF4BQ8NFT6 615 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 SPDYE1Q8NFV5 336 aaPredicted RBP9.59□□□□□ -0.87
USP3-217ENST00000560070 FAM167AQ96KS9 214 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 CEP170P1Q96L14 293 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 LXNQ9BS40 222 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 ZSWIM4Q9H7M6 989 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.59□□□□□ -0.87
USP3-217ENST00000560070 TFIP11Q9UBB9 837 aaKnown RBP9.59□□□□□ -0.87
USP3-217ENST00000560070 DAXXQ9UER7 740 aaPredicted RBP9.59□□□□□ -0.87
USP3-217ENST00000560070 LRWD1Q9UFC0 647 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 MTMR6Q9Y217 621 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 AKT3Q9Y243 479 aa9.59□□□□□ -0.87
USP3-217ENST00000560070 MKI67P46013 3256 aaKnown RBP9.59□□□□□ -0.87
USP3-217ENST00000560070 IGSF9BQ9UPX0 1349 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 SMIM35A0A1B0GVV1 85 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 PP2D1A8MPX8 630 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 M0QZ92 97 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 DKC1O60832 514 aaKnown RBP eCLIP9.58□□□□□ -0.88
USP3-217ENST00000560070 MED24O75448 989 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 C22orf31O95567 290 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 ACTN1P12814 892 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 YWHABP31946 246 aaKnown RBP9.58□□□□□ -0.88
USP3-217ENST00000560070 RFC2P35250 354 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 CCT6AP40227 531 aaKnown RBP9.58□□□□□ -0.88
USP3-217ENST00000560070 RABGGTBP53611 331 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 MRPS6P82932 125 aaKnown RBP9.58□□□□□ -0.88
USP3-217ENST00000560070 TBC1D8BQ0IIM8 1120 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 RESTQ13127 1097 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 IER5Q5VY09 327 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 TAF2Q6P1X5 1199 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 PSRC1Q6PGN9 363 aaPredicted RBP9.58□□□□□ -0.88
USP3-217ENST00000560070 MAEAQ7L5Y9 396 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 OTUD6AQ7L8S5 288 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 CATSPER3Q86XQ3 398 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 HERVK_113Q902F9 699 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 PLIN2Q99541 437 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 HSD17B14Q9BPX1 270 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 NIFKQ9BYG3 293 aaKnown RBP9.58□□□□□ -0.88
USP3-217ENST00000560070 CELF4Q9BZC1 486 aaKnown RBP9.58□□□□□ -0.88
USP3-217ENST00000560070 POLD4Q9HCU8 107 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 CLIC4Q9Y696 253 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 SLC4A7Q9Y6M7 1214 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 LRRC37A2A6NM11 1700 aa9.58□□□□□ -0.88
USP3-217ENST00000560070 MCM3APO60318 1980 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.57□□□□□ -0.88
USP3-217ENST00000560070 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.57□□□□□ -0.88
USP3-217ENST00000560070 VWA3AA6NCI4 1184 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 MAGEB2O15479 319 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 CSDE1O75534 798 aaKnown RBP9.57□□□□□ -0.88
USP3-217ENST00000560070 SPATA31C1P0DKV0 1188 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 TMOD1P28289 359 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 CD52P31358 61 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 NLRP11P59045 1033 aaKnown RBP9.57□□□□□ -0.88
USP3-217ENST00000560070 RBL2Q08999 1139 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 MGAT3Q09327 533 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 NFX1Q12986 1120 aaKnown RBP9.57□□□□□ -0.88
USP3-217ENST00000560070 DRP2Q13474 957 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 IKBKEQ14164 716 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 LPIN1Q14693 890 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 SF3A1Q15459 793 aaKnown RBP9.57□□□□□ -0.88
USP3-217ENST00000560070 TARBP2Q15633 366 aaKnown RBP9.57□□□□□ -0.88
USP3-217ENST00000560070 ECM1Q16610 540 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 FAM26DQ5JW98 314 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 CNKSR3Q6P9H4 555 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.57□□□□□ -0.88
USP3-217ENST00000560070 BRAPQ7Z569 592 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 C4orf19Q8IY42 314 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 NME8Q8N427 588 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 ERMNQ8TAM6 284 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 SEPT8Q92599 483 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 TMEM143Q96AN5 459 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 FAM161BQ96MY7 647 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 SCLT1Q96NL6 688 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 AGO3Q9H9G7 860 aaKnown RBP9.57□□□□□ -0.88
USP3-217ENST00000560070 CYP26B1Q9NR63 512 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 SUCLA2Q9P2R7 463 aaPredicted RBP9.57□□□□□ -0.88
USP3-217ENST00000560070 CEP131Q9UPN4 1083 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 TRPV2Q9Y5S1 764 aa9.57□□□□□ -0.88
USP3-217ENST00000560070 RBBP6Q7Z6E9 1792 aaKnown RBP9.57□□□□□ -0.88
USP3-217ENST00000560070 COL1A2P08123 1366 aa9.56□□□□□ -0.88
USP3-217ENST00000560070 A0A1W2PPC1 479 aa9.56□□□□□ -0.88
USP3-217ENST00000560070 UPP2O95045 317 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms