RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 MECP2P51608 486 aaKnown RBP6.93□□□□□ -1.3
CRNDE-208ENST00000560029 NKX3-2P78367 333 aa6.93□□□□□ -1.3
CRNDE-208ENST00000560029 ARHGEF18Q6ZSZ5 1173 aa6.93□□□□□ -1.3
CRNDE-208ENST00000560029 EP400NLQ6ZTU2 488 aa6.93□□□□□ -1.3
CRNDE-208ENST00000560029 PLEKHH3Q7Z736 793 aa6.93□□□□□ -1.3
CRNDE-208ENST00000560029 ARRDC4Q8NCT1 418 aa6.93□□□□□ -1.3
CRNDE-208ENST00000560029 GPATCH3Q96I76 525 aa6.93□□□□□ -1.3
CRNDE-208ENST00000560029 YTHDC1Q96MU7 727 aaKnown RBP6.93□□□□□ -1.3
CRNDE-208ENST00000560029 TMX1Q9H3N1 280 aa6.93□□□□□ -1.3
CRNDE-208ENST00000560029 ASH2LQ9UBL3 628 aa6.93□□□□□ -1.3
CRNDE-208ENST00000560029 SRPK3Q9UPE1 567 aa6.93□□□□□ -1.3
CRNDE-208ENST00000560029 TELO2Q9Y4R8 837 aa6.93□□□□□ -1.3
CRNDE-208ENST00000560029 PTPDC1A2A3K4 754 aa6.92□□□□□ -1.3
CRNDE-208ENST00000560029 GRIN1Q05586 938 aa6.92□□□□□ -1.3
CRNDE-208ENST00000560029 TUSC3Q13454 348 aa6.92□□□□□ -1.3
CRNDE-208ENST00000560029 R3HDM1Q15032 1099 aaKnown RBP6.92□□□□□ -1.3
CRNDE-208ENST00000560029 FSTL4Q6MZW2 842 aa6.92□□□□□ -1.3
CRNDE-208ENST00000560029 CYP4F22Q6NT55 531 aa6.92□□□□□ -1.3
CRNDE-208ENST00000560029 KCTD1Q719H9 257 aa6.92□□□□□ -1.3
CRNDE-208ENST00000560029 DDX46Q7L014 1031 aaKnown RBP6.92□□□□□ -1.3
CRNDE-208ENST00000560029 STRA8Q7Z7C7 330 aa6.92□□□□□ -1.3
CRNDE-208ENST00000560029 PHOSPHO1Q8TCT1 267 aa6.92□□□□□ -1.3
CRNDE-208ENST00000560029 CLEC4DQ8WXI8 215 aa6.92□□□□□ -1.3
CRNDE-208ENST00000560029 ORAI3Q9BRQ5 295 aa6.92□□□□□ -1.3
CRNDE-208ENST00000560029 ZNF341Q9BYN7 854 aa6.92□□□□□ -1.3
CRNDE-208ENST00000560029 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.92□□□□□ -1.3
CRNDE-208ENST00000560029 B4GALT6Q9UBX8 382 aa6.92□□□□□ -1.3
CRNDE-208ENST00000560029 SLC12A8A0AV02 714 aa6.91□□□□□ -1.3
CRNDE-208ENST00000560029 SCDO00767 359 aa6.91□□□□□ -1.3
CRNDE-208ENST00000560029 F2P00734 622 aa6.91□□□□□ -1.3
CRNDE-208ENST00000560029 SCNN1BP51168 640 aa6.91□□□□□ -1.3
CRNDE-208ENST00000560029 EPHB4P54760 987 aa6.91□□□□□ -1.3
CRNDE-208ENST00000560029 STRN3Q13033 797 aa6.91□□□□□ -1.3
CRNDE-208ENST00000560029 PTPROQ16827 1216 aa6.91□□□□□ -1.3
CRNDE-208ENST00000560029 ZCCHC14Q8WYQ9 949 aaKnown RBP6.91□□□□□ -1.3
CRNDE-208ENST00000560029 TCAF1Q9Y4C2 921 aa6.91□□□□□ -1.3
CRNDE-208ENST00000560029 NUB1Q9Y5A7 615 aa6.91□□□□□ -1.3
CRNDE-208ENST00000560029 COL4A3BPQ9Y5P4 624 aa6.91□□□□□ -1.3
CRNDE-208ENST00000560029 ATP23Q9Y6H3 246 aa6.91□□□□□ -1.3
CRNDE-208ENST00000560029 PATE3B3GLJ2 98 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 MUSKO15146 869 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 GAS7O60861 476 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 ZNF623O75123 536 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 NCLP19338 710 aaKnown RBP6.9□□□□□ -1.3
CRNDE-208ENST00000560029 IRF9Q00978 393 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 AMPD3Q01432 767 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 FIGNQ5HY92 759 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 OTOP1Q7RTM1 612 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.9□□□□□ -1.3
CRNDE-208ENST00000560029 KIF18BQ86Y91 864 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 NOSTRINQ8IVI9 506 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 TRIM48Q8IWZ4 208 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 NLGN4XQ8N0W4 816 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 OR2W6PQ8NHA6 318 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 CLIC6Q96NY7 704 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 BOCQ9BWV1 1114 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 PCDH12Q9NPG4 1184 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 RIC8BQ9NVN3 520 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 RBPJLQ9UBG7 517 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 WASF3Q9UPY6 502 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 ZKSCAN5Q9Y2L8 839 aa6.9□□□□□ -1.3
CRNDE-208ENST00000560029 FAM90A27PA6NNH2 459 aa6.89□□□□□ -1.31
CRNDE-208ENST00000560029 ZBTB48P10074 688 aaPredicted RBP6.89□□□□□ -1.31
CRNDE-208ENST00000560029 ATP2A2P16615 1042 aaKnown RBP6.89□□□□□ -1.31
CRNDE-208ENST00000560029 POU3F3P20264 500 aaPredicted RBP6.89□□□□□ -1.31
CRNDE-208ENST00000560029 SELENOPP49908 381 aa6.89□□□□□ -1.31
CRNDE-208ENST00000560029 EPHA5P54756 1037 aa6.89□□□□□ -1.31
CRNDE-208ENST00000560029 DSG1Q02413 1049 aa6.89□□□□□ -1.31
CRNDE-208ENST00000560029 SART3Q15020 963 aaKnown RBP6.89□□□□□ -1.31
CRNDE-208ENST00000560029 ARHGAP44Q17R89 818 aa6.89□□□□□ -1.31
CRNDE-208ENST00000560029 PHF19Q5T6S3 580 aa6.89□□□□□ -1.31
CRNDE-208ENST00000560029 BTBD8Q5XKL5 378 aa6.89□□□□□ -1.31
CRNDE-208ENST00000560029 AFAP1L2Q8N4X5 818 aa6.89□□□□□ -1.31
CRNDE-208ENST00000560029 Q8TCH9 128 aa6.89□□□□□ -1.31
CRNDE-208ENST00000560029 CHTF18Q8WVB6 975 aa6.89□□□□□ -1.31
CRNDE-208ENST00000560029 GPR101Q96P66 508 aaPredicted RBP6.89□□□□□ -1.31
CRNDE-208ENST00000560029 THG1LQ9NWX6 298 aaKnown RBP6.89□□□□□ -1.31
CRNDE-208ENST00000560029 H2AFY2Q9P0M6 372 aaPredicted RBP6.89□□□□□ -1.31
CRNDE-208ENST00000560029 NPIPB8E9PQR5 432 aa6.88□□□□□ -1.31
CRNDE-208ENST00000560029 CLASP2O75122 1294 aaKnown RBP6.88□□□□□ -1.31
CRNDE-208ENST00000560029 PTPN1P18031 435 aaKnown RBP6.88□□□□□ -1.31
CRNDE-208ENST00000560029 IL2P60568 153 aa6.88□□□□□ -1.31
CRNDE-208ENST00000560029 DHCR24Q15392 516 aa6.88□□□□□ -1.31
CRNDE-208ENST00000560029 SEC23AQ15436 765 aa6.88□□□□□ -1.31
CRNDE-208ENST00000560029 TRMT10BQ6PF06 316 aaKnown RBP6.88□□□□□ -1.31
CRNDE-208ENST00000560029 TMC5Q6UXY8 1006 aa6.88□□□□□ -1.31
CRNDE-208ENST00000560029 ZCRB1Q8TBF4 217 aaKnown RBP6.88□□□□□ -1.31
CRNDE-208ENST00000560029 USP7Q93009 1102 aa6.88□□□□□ -1.31
CRNDE-208ENST00000560029 TOE1Q96GM8 510 aaKnown RBP6.88□□□□□ -1.31
CRNDE-208ENST00000560029 MEGF9Q9H1U4 602 aa6.88□□□□□ -1.31
CRNDE-208ENST00000560029 NGRNQ9NPE2 291 aaKnown RBP6.88□□□□□ -1.31
CRNDE-208ENST00000560029 OXSMQ9NWU1 459 aa6.88□□□□□ -1.31
CRNDE-208ENST00000560029 ACOT7O00154 380 aa6.87□□□□□ -1.31
CRNDE-208ENST00000560029 DVL2O14641 736 aa6.87□□□□□ -1.31
CRNDE-208ENST00000560029 HIP1RO75146 1068 aa6.87□□□□□ -1.31
CRNDE-208ENST00000560029 IBSPP21815 317 aaPredicted RBP6.87□□□□□ -1.31
CRNDE-208ENST00000560029 ID4P47928 161 aa6.87□□□□□ -1.31
CRNDE-208ENST00000560029 NFATC3Q12968 1075 aa6.87□□□□□ -1.31
CRNDE-208ENST00000560029 TMEM132BQ14DG7 1078 aa6.87□□□□□ -1.31
CRNDE-208ENST00000560029 PAN2Q504Q3 1202 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms