RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 GABBR1Q9UBS5 961 aa14.22□□□□□ -0.13
SNX1-209ENST00000559961 PCDHB12Q9Y5F1 795 aa14.22□□□□□ -0.13
SNX1-209ENST00000559961 IGLV3-22A0A075B6J6 115 aa14.21□□□□□ -0.13
SNX1-209ENST00000559961 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.21□□□□□ -0.13
SNX1-209ENST00000559961 C5orf67F2Z3F1 127 aa14.21□□□□□ -0.13
SNX1-209ENST00000559961 PPFIA3O75145 1194 aa14.21□□□□□ -0.13
SNX1-209ENST00000559961 DGKIO75912 1065 aa14.21□□□□□ -0.13
SNX1-209ENST00000559961 ZSCAN20P17040 1043 aaPredicted RBP14.21□□□□□ -0.13
SNX1-209ENST00000559961 CIITAP33076 1130 aa14.21□□□□□ -0.13
SNX1-209ENST00000559961 JAK3P52333 1124 aa14.21□□□□□ -0.13
SNX1-209ENST00000559961 CRYBB1P53674 252 aaPredicted RBP14.21□□□□□ -0.13
SNX1-209ENST00000559961 PKN1Q16512 942 aa14.21□□□□□ -0.13
SNX1-209ENST00000559961 PTCRAQ6ISU1 281 aaPredicted RBP14.21□□□□□ -0.13
SNX1-209ENST00000559961 CCDC60Q8IWA6 550 aaPredicted RBP14.21□□□□□ -0.13
SNX1-209ENST00000559961 ZBTB10Q96DT7 871 aa14.21□□□□□ -0.13
SNX1-209ENST00000559961 PABPC5Q96DU9 382 aaKnown RBP14.21□□□□□ -0.13
SNX1-209ENST00000559961 RIT2Q99578 217 aa14.21□□□□□ -0.13
SNX1-209ENST00000559961 AGXT2Q9BYV1 514 aa14.21□□□□□ -0.13
SNX1-209ENST00000559961 TM6SF1Q9BZW5 370 aa14.21□□□□□ -0.13
SNX1-209ENST00000559961 AGO3Q9H9G7 860 aaKnown RBP14.21□□□□□ -0.13
SNX1-209ENST00000559961 NCOA5Q9HCD5 579 aaKnown RBP14.21□□□□□ -0.13
SNX1-209ENST00000559961 DISC1Q9NRI5 854 aa14.21□□□□□ -0.13
SNX1-209ENST00000559961 PDRG1Q9NUG6 133 aa14.21□□□□□ -0.13
SNX1-209ENST00000559961 CLDND1Q9NY35 253 aa14.21□□□□□ -0.13
SNX1-209ENST00000559961 PCDHA4Q9UN74 947 aa14.21□□□□□ -0.13
SNX1-209ENST00000559961 AKT3Q9Y243 479 aa14.21□□□□□ -0.13
SNX1-209ENST00000559961 MAFBQ9Y5Q3 323 aaPredicted RBP14.21□□□□□ -0.13
SNX1-209ENST00000559961 NID2Q14112 1375 aa14.21□□□□□ -0.14
SNX1-209ENST00000559961 DHX15O43143 795 aaKnown RBP14.2□□□□□ -0.14
SNX1-209ENST00000559961 CHMP2AO43633 222 aa14.2□□□□□ -0.14
SNX1-209ENST00000559961 SARSP49591 514 aaKnown RBP14.2□□□□□ -0.14
SNX1-209ENST00000559961 DNM2P50570 870 aa14.2□□□□□ -0.14
SNX1-209ENST00000559961 EVCP57679 992 aa14.2□□□□□ -0.14
SNX1-209ENST00000559961 CDC42EP1Q00587 391 aa14.2□□□□□ -0.14
SNX1-209ENST00000559961 STK3Q13188 491 aa14.2□□□□□ -0.14
SNX1-209ENST00000559961 TMEM266Q2M3C6 531 aa14.2□□□□□ -0.14
SNX1-209ENST00000559961 PAN2Q504Q3 1202 aaKnown RBP14.2□□□□□ -0.14
SNX1-209ENST00000559961 TCEAL5Q5H9L2 206 aa14.2□□□□□ -0.14
SNX1-209ENST00000559961 LRCH2Q5VUJ6 765 aa14.2□□□□□ -0.14
SNX1-209ENST00000559961 SLC24A5Q71RS6 500 aa14.2□□□□□ -0.14
SNX1-209ENST00000559961 KIAA0319LQ8IZA0 1049 aa14.2□□□□□ -0.14
SNX1-209ENST00000559961 RASGRP4Q8TDF6 673 aa14.2□□□□□ -0.14
SNX1-209ENST00000559961 MICAL1Q8TDZ2 1067 aa14.2□□□□□ -0.14
SNX1-209ENST00000559961 CLP1Q92989 425 aaKnown RBP14.2□□□□□ -0.14
SNX1-209ENST00000559961 ADAM2Q99965 735 aa14.2□□□□□ -0.14
SNX1-209ENST00000559961 ATP6V0A4Q9HBG4 840 aa14.2□□□□□ -0.14
SNX1-209ENST00000559961 HOXA2O43364 376 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 COL9A1P20849 921 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 TBC1D8BQ0IIM8 1120 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 ANKRD1Q15327 319 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 NTRK3Q16288 839 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 CSPP1Q1MSJ5 1256 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 EFCAB12Q6NXP0 572 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 MIER3Q7Z3K6 550 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 ABI1Q8IZP0 508 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 BLIDQ8IZY5 108 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 RDM1Q8NG50 284 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 TBCKQ8TEA7 893 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 CRYGNQ8WXF5 182 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 P2RX5Q93086 422 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 ZNF689Q96CS4 500 aaPredicted RBP14.19□□□□□ -0.14
SNX1-209ENST00000559961 NAP1L4Q99733 375 aaKnown RBP14.19□□□□□ -0.14
SNX1-209ENST00000559961 SLKQ9H2G2 1235 aaPredicted RBP14.19□□□□□ -0.14
SNX1-209ENST00000559961 IGFLR1Q9H665 355 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 ST3GAL5Q9UNP4 418 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 PRRC2BQ5JSZ5 2229 aaKnown RBP14.19□□□□□ -0.14
SNX1-209ENST00000559961 EYSQ5T1H1 3165 aa14.19□□□□□ -0.14
SNX1-209ENST00000559961 CCDC194A0A1B0GVG4 234 aa14.18□□□□□ -0.14
SNX1-209ENST00000559961 DKC1O60832 514 aaKnown RBP eCLIP14.18□□□□□ -0.14
SNX1-209ENST00000559961 C22orf31O95567 290 aa14.18□□□□□ -0.14
SNX1-209ENST00000559961 OATP04181 439 aa14.18□□□□□ -0.14
SNX1-209ENST00000559961 NONOQ15233 471 aaKnown RBP eCLIP14.18□□□□□ -0.14
SNX1-209ENST00000559961 KIZQ2M2Z5 673 aa14.18□□□□□ -0.14
SNX1-209ENST00000559961 KRT25Q7Z3Z0 450 aa14.18□□□□□ -0.14
SNX1-209ENST00000559961 WASF1Q92558 559 aa14.18□□□□□ -0.14
SNX1-209ENST00000559961 PPP1R16BQ96T49 567 aa14.18□□□□□ -0.14
SNX1-209ENST00000559961 RGS18Q9NS28 235 aa14.18□□□□□ -0.14
SNX1-209ENST00000559961 NOC2LQ9Y3T9 749 aaKnown RBP14.18□□□□□ -0.14
SNX1-209ENST00000559961 KAT6AQ92794 2004 aa14.18□□□□□ -0.14
SNX1-209ENST00000559961 PRUNE2Q8WUY3 3088 aa14.18□□□□□ -0.14
SNX1-209ENST00000559961 FSD2A1L4K1 749 aa14.17□□□□□ -0.14
SNX1-209ENST00000559961 TBKBP1A7MCY6 615 aa14.17□□□□□ -0.14
SNX1-209ENST00000559961 H3BQ06 376 aaPredicted RBP14.17□□□□□ -0.14
SNX1-209ENST00000559961 GRM6O15303 877 aa14.17□□□□□ -0.14
SNX1-209ENST00000559961 MSH4O15457 936 aa14.17□□□□□ -0.14
SNX1-209ENST00000559961 CSPG5O95196 566 aa14.17□□□□□ -0.14
SNX1-209ENST00000559961 VTNP04004 478 aa14.17□□□□□ -0.14
SNX1-209ENST00000559961 NLRP11P59045 1033 aaKnown RBP14.17□□□□□ -0.14
SNX1-209ENST00000559961 TOB2Q14106 344 aaPredicted RBP14.17□□□□□ -0.14
SNX1-209ENST00000559961 Q4G0T1 1027 aa14.17□□□□□ -0.14
SNX1-209ENST00000559961 TMEM31Q5JXX7 168 aa14.17□□□□□ -0.14
SNX1-209ENST00000559961 RTN4RL1Q86UN2 441 aaPredicted RBP14.17□□□□□ -0.14
SNX1-209ENST00000559961 EXOC8Q8IYI6 725 aa14.17□□□□□ -0.14
SNX1-209ENST00000559961 GJD3Q8N144 294 aa14.17□□□□□ -0.14
SNX1-209ENST00000559961 NLRP7Q8WX94 980 aa14.17□□□□□ -0.14
SNX1-209ENST00000559961 OSMRQ99650 979 aa14.17□□□□□ -0.14
SNX1-209ENST00000559961 JPH2Q9BR39 696 aaPredicted RBP14.17□□□□□ -0.14
SNX1-209ENST00000559961 UPF3BQ9BZI7 483 aaKnown RBP14.17□□□□□ -0.14
SNX1-209ENST00000559961 BRMS1Q9HCU9 246 aa14.17□□□□□ -0.14
SNX1-209ENST00000559961 ERVK-5Q9HDB9 667 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms