RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 ZSWIM4Q9H7M6 989 aa15.33■□□□□ 0.04
CHRNB4-204ENST00000559849 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 VPS37CA5D8V6 355 aaPredicted RBP15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 LAD1O00515 517 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 STBD1O95210 358 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 C22orf31O95567 290 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 HSP90AA1P07900 732 aaKnown RBP15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 TECP42680 631 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 TARBP2Q15633 366 aaKnown RBP15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 CNKSR3Q6P9H4 555 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 BRAPQ7Z569 592 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 KIAA0319LQ8IZA0 1049 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 METTL13Q8N6R0 699 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 DYDC2Q96IM9 177 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 LXNQ9BS40 222 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 SEPT9Q9UHD8 586 aaPredicted RBP15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 M0QZ92 97 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 SOX1O00570 391 aaPredicted RBP15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 BAIAP3O94812 1187 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 TMOD1P28289 359 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 MRPS6P82932 125 aaKnown RBP15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 TBC1D8BQ0IIM8 1120 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 TMEM266Q2M3C6 531 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 ANO5Q75V66 913 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 TPH2Q8IWU9 490 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 NEK9Q8TD19 979 aa15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 CXXC1Q9P0U4 656 aaPredicted RBP15.32■□□□□ 0.04
CHRNB4-204ENST00000559849 POTEMA6NI47 508 aa15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 ZBBXA8MT70 800 aa15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 CYP4A11Q02928 519 aa15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 MGAT3Q09327 533 aa15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 IKBKEQ14164 716 aa15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 CTTNQ14247 550 aaKnown RBP15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 EFCAB12Q6NXP0 572 aa15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 OTUD6AQ7L8S5 288 aa15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 DBF4BQ8NFT6 615 aa15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 WRAP73Q9P2S5 460 aaPredicted RBP15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 CDY2AQ9Y6F7 541 aa15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 SLC4A7Q9Y6M7 1214 aa15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 FXR2P51116 673 aaKnown RBP eCLIP15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 SMAD3P84022 425 aaKnown RBP15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 PDIA5Q14554 519 aa15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 MTERF2Q49AM1 385 aa15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 PLEKHG4Q58EX7 1191 aa15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 LRCH3Q96II8 777 aa15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 CELF4Q9BZC1 486 aaKnown RBP15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 SUGCTQ9HAC7 445 aa15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 SQORQ9Y6N5 450 aa15.31■□□□□ 0.04
CHRNB4-204ENST00000559849 ABHD14A-ACY1A0A1B0GW23 586 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 TMEM150BA6NC51 233 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 EFCAB14O75071 495 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 LYPLA2O95372 231 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 PDIA4P13667 645 aaKnown RBP15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 YWHABP31946 246 aaKnown RBP15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 PRPHP41219 470 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 TMEM62Q0P6H9 643 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 GPR153Q6NV75 609 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 FERMT3Q86UX7 667 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 EXOC8Q8IYI6 725 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 ZNF710Q8N1W2 664 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 ERMNQ8TAM6 284 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 SEPT8Q92599 483 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 RAB34Q9BZG1 259 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 CYP26B1Q9NR63 512 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 PPME1Q9Y570 386 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 TRPV2Q9Y5S1 764 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 KDM3AQ9Y4C1 1321 aa15.3■□□□□ 0.04
CHRNB4-204ENST00000559849 STX6O43752 255 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 FBXO47Q5MNV8 452 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 USP38Q8NB14 1042 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 APBB2Q92870 758 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 CEP170P1Q96L14 293 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 CEP89Q96ST8 783 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 MAP7D2Q96T17 732 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 JPH2Q9BR39 696 aaPredicted RBP15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 SH2D3AQ9BRG2 576 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 IFIH1Q9BYX4 1025 aaKnown RBP15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 OSBPL7Q9BZF2 842 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 LOXHD1Q8IVV2 1947 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 GHRP10912 638 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 XRCC6P12956 609 aaKnown RBP eCLIP15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 DNM2P50570 870 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 NPEPPSP55786 919 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 LPIN1Q14693 890 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 DTHD1Q6ZMT9 781 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 CATSPER3Q86XQ3 398 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 LINC01465Q8N7H1 131 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 PHOSPHO2Q8TCD6 241 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 POLR3CQ9BUI4 534 aaPredicted RBP15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 TUFT1Q9NNX1 390 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 LRWD1Q9UFC0 647 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 AKT3Q9Y243 479 aa15.29■□□□□ 0.04
CHRNB4-204ENST00000559849 IGKV6-21A0A0C4DH24 114 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 MAFO75444 373 aaPredicted RBP15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 SPATA31C1P0DKV0 1188 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 RPA1P27694 616 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 KCNJ6P48051 423 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 CLCN3P51790 818 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms