RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 POLR3CQ9BUI4 534 aaPredicted RBP10.15□□□□□ -0.78
HMG20A-209ENST00000559728 KATNAL1Q9BW62 490 aa10.15□□□□□ -0.78
HMG20A-209ENST00000559728 NIFKQ9BYG3 293 aaKnown RBP10.15□□□□□ -0.78
HMG20A-209ENST00000559728 AZI2Q9H6S1 392 aa10.15□□□□□ -0.78
HMG20A-209ENST00000559728 SETD4Q9NVD3 440 aa10.15□□□□□ -0.78
HMG20A-209ENST00000559728 CHMP5Q9NZZ3 219 aa10.15□□□□□ -0.78
HMG20A-209ENST00000559728 LRWD1Q9UFC0 647 aa10.15□□□□□ -0.78
HMG20A-209ENST00000559728 SAMM50Q9Y512 469 aa10.15□□□□□ -0.78
HMG20A-209ENST00000559728 DOCK5Q9H7D0 1870 aa10.15□□□□□ -0.79
HMG20A-209ENST00000559728 A0A087X0B3 334 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 POTEB3A0JP26 581 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 TRIM43BA6NCK2 446 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 PPP6R2O75170 966 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 ITGB8P26012 769 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 RPA1P27694 616 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 LONP1P36776 959 aaKnown RBP10.14□□□□□ -0.79
HMG20A-209ENST00000559728 FOXK1P85037 733 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 GRB10Q13322 594 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 GRIK4Q16099 956 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 TMEM119Q4V9L6 283 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 SPECC1Q5M775 1068 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 FAM160B1Q5W0V3 765 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 TRAF7Q6Q0C0 670 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 POTEBQ6S5H4 581 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 SHC4Q6S5L8 630 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 RUFY4Q6ZNE9 571 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 LINC01465Q8N7H1 131 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 NEK9Q8TD19 979 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 LEO1Q8WVC0 666 aaPredicted RBP10.14□□□□□ -0.79
HMG20A-209ENST00000559728 TRIM43Q96BQ3 446 aaPredicted RBP10.14□□□□□ -0.79
HMG20A-209ENST00000559728 VWCEQ96DN2 955 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 EPSTI1Q96J88 318 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 SH2D3AQ9BRG2 576 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 ZSWIM4Q9H7M6 989 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 TUFT1Q9NNX1 390 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 TBX21Q9UL17 535 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 ZNF215Q9UL58 517 aaPredicted RBP10.14□□□□□ -0.79
HMG20A-209ENST00000559728 PCDHA7Q9UN72 937 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 CEP131Q9UPN4 1083 aa10.14□□□□□ -0.79
HMG20A-209ENST00000559728 NRCAMQ92823 1304 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 IGKV6-21A0A0C4DH24 114 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 TREHO43280 583 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 HBP1O60381 514 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 PQBP1O60828 265 aaKnown RBP10.13□□□□□ -0.79
HMG20A-209ENST00000559728 C22orf31O95567 290 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 CYP2C9P11712 490 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 NPEPPSP55786 919 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 CHMP4BP1P59074 171 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 PPFIA1Q13136 1202 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 GPNMBQ14956 572 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 TMEM266Q2M3C6 531 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 XKR3Q5GH77 459 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 PLA2G4FQ68DD2 849 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 POTEGQ6S5H5 508 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 SERINC5Q86VE9 423 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 TPH2Q8IWU9 490 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 C7orf31Q8N865 590 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 KRI1Q8N9T8 703 aaKnown RBP10.13□□□□□ -0.79
HMG20A-209ENST00000559728 TNPO1Q92973 898 aaKnown RBP10.13□□□□□ -0.79
HMG20A-209ENST00000559728 ATP6V0A1Q93050 837 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 VTI1AQ96AJ9 217 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 AK8Q96MA6 479 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 SEZ6LQ9BYH1 1024 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 GDPD2Q9HCC8 539 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 PDLIM7Q9NR12 457 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 ATP11BQ9Y2G3 1177 aa10.13□□□□□ -0.79
HMG20A-209ENST00000559728 UMODL1Q5DID0 1318 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 C17orf102A2RUQ5 167 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 CUTAO60888 179 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 KLRC1P26715 233 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 YWHABP31946 246 aaKnown RBP10.12□□□□□ -0.79
HMG20A-209ENST00000559728 RARRES1P49788 294 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 KRT85P78386 507 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 RBL2Q08999 1139 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 STK38Q15208 465 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 NAALADL2Q58DX5 795 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 FAM47CQ5HY64 1035 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 MTHFD1LQ6UB35 978 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 TRMT1LQ7Z2T5 733 aaKnown RBP10.12□□□□□ -0.79
HMG20A-209ENST00000559728 KCNG4Q8TDN1 519 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 SNX29Q8TEQ0 813 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 PIGOQ8TEQ8 1089 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 SYMPKQ92797 1274 aaKnown RBP10.12□□□□□ -0.79
HMG20A-209ENST00000559728 OSBPL7Q9BZF2 842 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 CCSER1Q9C0I3 900 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 XPNPEP1Q9NQW7 623 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 BLOC1S4Q9NUP1 217 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 TCEAL9Q9UHQ7 104 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 CFAP45Q9UL16 551 aa10.12□□□□□ -0.79
HMG20A-209ENST00000559728 RRN3P2A6NIE6 340 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 DDX11L8A8MPP1 907 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 E9PMD0 336 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 KIAA0355O15063 1070 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 MUTP22033 750 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 CCT6AP40227 531 aaKnown RBP10.11□□□□□ -0.79
HMG20A-209ENST00000559728 IGBP1P78318 339 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 PTK7Q13308 1070 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 DRP2Q13474 957 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 KARSQ15046 597 aaKnown RBP10.11□□□□□ -0.79
HMG20A-209ENST00000559728 PTGISQ16647 500 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms