RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 CKAP2LQ8IYA6 745 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 SNX29Q8TEQ0 813 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 BBXQ8WY36 941 aaPredicted RBP12.21□□□□□ -0.45
TPM1-217ENST00000559108 SYMPKQ92797 1274 aaKnown RBP12.21□□□□□ -0.45
TPM1-217ENST00000559108 ATP6V0A1Q93050 837 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 NIFKQ9BYG3 293 aaKnown RBP12.21□□□□□ -0.45
TPM1-217ENST00000559108 PPP1R12CQ9BZL4 782 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 XPNPEP1Q9NQW7 623 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 TCEAL9Q9UHQ7 104 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 CIZ1Q9ULV3 898 aaPredicted RBP12.21□□□□□ -0.45
TPM1-217ENST00000559108 PCDHA7Q9UN72 937 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 CEP290O15078 2479 aa12.21□□□□□ -0.45
TPM1-217ENST00000559108 COL1A2P08123 1366 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 NRCAMQ92823 1304 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 DDX11L8A8MPP1 907 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 KIAA0355O15063 1070 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 HBP1O60381 514 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 PPP6R2O75170 966 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 BMP15O95972 392 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 CYP2C18P33260 490 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 RARRES1P49788 294 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 EPHB4P54760 987 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 TCTN1Q2MV58 587 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 NAALADL2Q58DX5 795 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 XKR3Q5GH77 459 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 HYIQ5T013 277 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 MTHFD1LQ6UB35 978 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 TNPO1Q92973 898 aaKnown RBP12.2□□□□□ -0.46
TPM1-217ENST00000559108 HTATIP2Q9BUP3 242 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 ZSWIM4Q9H7M6 989 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 TUFT1Q9NNX1 390 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 PRDM5Q9NQX1 630 aaPredicted RBP12.2□□□□□ -0.46
TPM1-217ENST00000559108 BLOC1S4Q9NUP1 217 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 DDX19AQ9NUU7 478 aaKnown RBP12.2□□□□□ -0.46
TPM1-217ENST00000559108 TUBE1Q9UJT0 475 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 KIAA1024Q9UPX6 916 aa12.2□□□□□ -0.46
TPM1-217ENST00000559108 IGKV6-21A0A0C4DH24 114 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 H0YGN5 161 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 EVI5O60447 810 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 NCLP19338 710 aaKnown RBP12.19□□□□□ -0.46
TPM1-217ENST00000559108 KLRC1P26715 233 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 LONP1P36776 959 aaKnown RBP12.19□□□□□ -0.46
TPM1-217ENST00000559108 CLCN3P51790 818 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 RBL2Q08999 1139 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 ZNF484Q5JVG2 852 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 CABP7Q86V35 215 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 LRRC71Q8N4P6 559 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 KRI1Q8N9T8 703 aaKnown RBP12.19□□□□□ -0.46
TPM1-217ENST00000559108 NEK9Q8TD19 979 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 DNAJB3Q8WWF6 145 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 DPF3Q92784 378 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 FAM49AQ9H0Q0 323 aaPredicted RBP12.19□□□□□ -0.46
TPM1-217ENST00000559108 POLD4Q9HCU8 107 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 CYP26B1Q9NR63 512 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 CHMP5Q9NZZ3 219 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 CEP131Q9UPN4 1083 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 MYH11P35749 1972 aa12.19□□□□□ -0.46
TPM1-217ENST00000559108 MROH7Q68CQ1 1323 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 DCDC2CA8MYV0 355 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 CTSHP09668 335 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 CKBP12277 381 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 PLCG1P19174 1290 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 KRT85P78386 507 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 MGAT3Q09327 533 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 TMEM62Q0P6H9 643 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 PTK7Q13308 1070 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 ZRSR1Q15695 479 aaKnown RBP12.18□□□□□ -0.46
TPM1-217ENST00000559108 ZNF618Q5T7W0 954 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 ATL3Q6DD88 541 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 KIAA0319LQ8IZA0 1049 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 SCLYQ96I15 445 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 ZNF668Q96K58 619 aaPredicted RBP12.18□□□□□ -0.46
TPM1-217ENST00000559108 FAM167AQ96KS9 214 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 PPP1R16BQ96T49 567 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 RUSC1Q9BVN2 902 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 CCSER1Q9C0I3 900 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 DHX33Q9H6R0 707 aaKnown RBP12.18□□□□□ -0.46
TPM1-217ENST00000559108 CDHR5Q9HBB8 845 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 TMEM39AQ9NV64 488 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 PCDHA2Q9Y5H9 948 aa12.18□□□□□ -0.46
TPM1-217ENST00000559108 RRN3P2A6NIE6 340 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 CUTAO60888 179 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 MAFO75444 373 aaPredicted RBP12.17□□□□□ -0.46
TPM1-217ENST00000559108 CHRNA1P02708 482 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 CCL23P55773 120 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 MLLT1Q03111 559 aaPredicted RBP12.17□□□□□ -0.46
TPM1-217ENST00000559108 E2F4Q16254 413 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 XKR9Q5GH70 373 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 KRT79Q5XKE5 535 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 C16orf59Q7L2K0 433 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 KSR1Q8IVT5 923 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 ERMNQ8TAM6 284 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 TMEM40Q8WWA1 233 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 BADQ92934 168 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 CEP170P1Q96L14 293 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 SPATA32Q96LK8 384 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 AK8Q96MA6 479 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 PANK2Q9BZ23 570 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 BHMT2Q9H2M3 363 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 HIPK3Q9H422 1215 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms