RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 GTF2IRD1Q9UHL9 959 aa13.89□□□□□ -0.19
GABPB1-208ENST00000558970 KDM3AQ9Y4C1 1321 aa13.89□□□□□ -0.19
GABPB1-208ENST00000558970 A0A087X0B3 334 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 A0A1B0GVL5 298 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 GOLGA6L4A6NEF3 574 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 TREHO43280 583 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 HBP1O60381 514 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 STBD1O95210 358 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 PTGISQ16647 500 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 NFRKBQ6P4R8 1299 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 MAEAQ7L5Y9 396 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 UBE2Q1Q7Z7E8 422 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 C4orf19Q8IY42 314 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 C7orf61Q8IZ16 206 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 LRRC15Q8TF66 581 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 PPP1R16BQ96T49 567 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 FAM49AQ9H0Q0 323 aaPredicted RBP13.88□□□□□ -0.19
GABPB1-208ENST00000558970 PRDM5Q9NQX1 630 aaPredicted RBP13.88□□□□□ -0.19
GABPB1-208ENST00000558970 CCDC39Q9UFE4 941 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 TUBE1Q9UJT0 475 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 COLQQ9Y215 455 aaPredicted RBP13.88□□□□□ -0.19
GABPB1-208ENST00000558970 TANC1Q9C0D5 1861 aa13.88□□□□□ -0.19
GABPB1-208ENST00000558970 SCN5AQ14524 2016 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 ZBTB42B2RXF5 422 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 USO1O60763 962 aaKnown RBP13.87□□□□□ -0.19
GABPB1-208ENST00000558970 GADD45BO75293 160 aaPredicted RBP13.87□□□□□ -0.19
GABPB1-208ENST00000558970 CYP2C9P11712 490 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 TLE2Q04725 743 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 RAD51AP2Q09MP3 1159 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 TBC1D8BQ0IIM8 1120 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 RESP18Q5W5W9 173 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 ADALQ6DHV7 355 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 RUFY4Q6ZNE9 571 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 OTUD6AQ7L8S5 288 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 FAM126BQ8IXS8 530 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 LRRC71Q8N4P6 559 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 METTL13Q8N6R0 699 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 FSIP1Q8NA03 581 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 DHX58Q96C10 678 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 NACC1Q96RE7 527 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 NT5C3AQ9H0P0 336 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 BHMT2Q9H2M3 363 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 POLD4Q9HCU8 107 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 CYP26B1Q9NR63 512 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 FAM13BQ9NYF5 915 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 STK24Q9Y6E0 443 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 MORC2Q9Y6X9 1032 aaPredicted RBP13.87□□□□□ -0.19
GABPB1-208ENST00000558970 NRCAMQ92823 1304 aa13.87□□□□□ -0.19
GABPB1-208ENST00000558970 ARHGEF35A5YM69 484 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 DCDC2CA8MYV0 355 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 TLR3O15455 904 aaKnown RBP13.86□□□□□ -0.19
GABPB1-208ENST00000558970 PRPF40AO75400 957 aaKnown RBP13.86□□□□□ -0.19
GABPB1-208ENST00000558970 PFKFB1P16118 471 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 CAPN2P17655 700 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 KLRC1P26715 233 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 STAT6P42226 847 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 CDK7P50613 346 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 CLCN3P51790 818 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 POLGP54098 1239 aaPredicted RBP13.86□□□□□ -0.19
GABPB1-208ENST00000558970 TMEM62Q0P6H9 643 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 MCM6Q14566 821 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 CSPP1Q1MSJ5 1256 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 TMEM119Q4V9L6 283 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 ZNF484Q5JVG2 852 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 MARCH8Q5T0T0 291 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 RRAGBQ5VZM2 374 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 MTHFD1LQ6UB35 978 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 SLC43A3Q8NBI5 491 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 STAMQ92783 540 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 DPF3Q92784 378 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 WNT8BQ93098 351 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 ZNF668Q96K58 619 aaPredicted RBP13.86□□□□□ -0.19
GABPB1-208ENST00000558970 GBP4Q96PP9 640 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 PPP1R12CQ9BZL4 782 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 CCSER1Q9C0I3 900 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 GOLPH3LQ9H4A5 285 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 SUGCTQ9HAC7 445 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 DNM3Q9UQ16 869 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 MROH7Q68CQ1 1323 aa13.86□□□□□ -0.19
GABPB1-208ENST00000558970 COL1A2P08123 1366 aa13.85□□□□□ -0.19
GABPB1-208ENST00000558970 H0YGN5 161 aa13.85□□□□□ -0.19
GABPB1-208ENST00000558970 POLR2DO15514 142 aaKnown RBP13.85□□□□□ -0.19
GABPB1-208ENST00000558970 LYPLA2O95372 231 aa13.85□□□□□ -0.19
GABPB1-208ENST00000558970 C22orf31O95567 290 aa13.85□□□□□ -0.19
GABPB1-208ENST00000558970 CTSHP09668 335 aa13.85□□□□□ -0.19
GABPB1-208ENST00000558970 GNAT1P11488 350 aa13.85□□□□□ -0.19
GABPB1-208ENST00000558970 RARRES1P49788 294 aa13.85□□□□□ -0.19
GABPB1-208ENST00000558970 PTPN11Q06124 597 aaPredicted RBP13.85□□□□□ -0.19
GABPB1-208ENST00000558970 SNX17Q15036 470 aa13.85□□□□□ -0.19
GABPB1-208ENST00000558970 SH3RF1Q7Z6J0 888 aa13.85□□□□□ -0.19
GABPB1-208ENST00000558970 SESTD1Q86VW0 696 aa13.85□□□□□ -0.19
GABPB1-208ENST00000558970 DNAJB3Q8WWF6 145 aa13.85□□□□□ -0.19
GABPB1-208ENST00000558970 MRPS27Q92552 414 aaKnown RBP13.85□□□□□ -0.19
GABPB1-208ENST00000558970 NIFKQ9BYG3 293 aaKnown RBP13.85□□□□□ -0.19
GABPB1-208ENST00000558970 RANBP2P49792 3224 aaKnown RBP13.85□□□□□ -0.19
GABPB1-208ENST00000558970 LTBP2Q14767 1821 aa13.85□□□□□ -0.19
GABPB1-208ENST00000558970 NPHP3-ACAD11A0A0J9YXS1 232 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 RRN3P2A6NIE6 340 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 EYA4O95677 639 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 CLTBP09497 229 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms