RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 PRRC2BQ5JSZ5 2229 aaKnown RBP17.51■□□□□ 0.39
CSHL1-208ENST00000558609 CCDC194A0A1B0GVG4 234 aa17.5■□□□□ 0.39
CSHL1-208ENST00000558609 ENPP3O14638 875 aa17.5■□□□□ 0.39
CSHL1-208ENST00000558609 GTPBP6O43824 516 aaPredicted RBP17.5■□□□□ 0.39
CSHL1-208ENST00000558609 LPXNO60711 386 aa17.5■□□□□ 0.39
CSHL1-208ENST00000558609 TMEM62Q0P6H9 643 aa17.5■□□□□ 0.39
CSHL1-208ENST00000558609 CCDC85BQ15834 202 aaPredicted RBP17.5■□□□□ 0.39
CSHL1-208ENST00000558609 B3GNT9Q6UX72 402 aa17.5■□□□□ 0.39
CSHL1-208ENST00000558609 RDM1Q8NG50 284 aa17.5■□□□□ 0.39
CSHL1-208ENST00000558609 ETNPPLQ8TBG4 499 aa17.5■□□□□ 0.39
CSHL1-208ENST00000558609 FAM167AQ96KS9 214 aa17.5■□□□□ 0.39
CSHL1-208ENST00000558609 UNC45AQ9H3U1 944 aa17.5■□□□□ 0.39
CSHL1-208ENST00000558609 GJB4Q9NTQ9 266 aa17.5■□□□□ 0.39
CSHL1-208ENST00000558609 CEP131Q9UPN4 1083 aa17.5■□□□□ 0.39
CSHL1-208ENST00000558609 XIRP2A4UGR9 3374 aa17.49■□□□□ 0.39
CSHL1-208ENST00000558609 WDR81Q562E7 1941 aa17.49■□□□□ 0.39
CSHL1-208ENST00000558609 ZNF862O60290 1169 aa17.49■□□□□ 0.39
CSHL1-208ENST00000558609 DTNBO60941 627 aa17.49■□□□□ 0.39
CSHL1-208ENST00000558609 UPP2O95045 317 aa17.49■□□□□ 0.39
CSHL1-208ENST00000558609 C22orf31O95567 290 aa17.49■□□□□ 0.39
CSHL1-208ENST00000558609 CD52P31358 61 aa17.49■□□□□ 0.39
CSHL1-208ENST00000558609 GRB10Q13322 594 aa17.49■□□□□ 0.39
CSHL1-208ENST00000558609 PPP4R3AQ6IN85 833 aa17.49■□□□□ 0.39
CSHL1-208ENST00000558609 FAM43BQ6ZT52 329 aaPredicted RBP17.49■□□□□ 0.39
CSHL1-208ENST00000558609 NEK8Q86SG6 692 aa17.49■□□□□ 0.39
CSHL1-208ENST00000558609 ADAMTS19Q8TE59 1207 aa17.49■□□□□ 0.39
CSHL1-208ENST00000558609 GJA10Q969M2 543 aa17.49■□□□□ 0.39
CSHL1-208ENST00000558609 YME1L1Q96TA2 773 aa17.49■□□□□ 0.39
CSHL1-208ENST00000558609 FTHL17Q9BXU8 183 aa17.49■□□□□ 0.39
CSHL1-208ENST00000558609 NRBP2Q9NSY0 501 aa17.49■□□□□ 0.39
CSHL1-208ENST00000558609 THEGQ9P2T0 379 aa17.49■□□□□ 0.39
CSHL1-208ENST00000558609 DDX25Q9UHL0 483 aaKnown RBP17.49■□□□□ 0.39
CSHL1-208ENST00000558609 MAGEB2O15479 319 aa17.48■□□□□ 0.39
CSHL1-208ENST00000558609 CHMP2AO43633 222 aa17.48■□□□□ 0.39
CSHL1-208ENST00000558609 GCFC2P16383 781 aaKnown RBP17.48■□□□□ 0.39
CSHL1-208ENST00000558609 LETM2Q2VYF4 491 aa17.48■□□□□ 0.39
CSHL1-208ENST00000558609 TRMT1LQ7Z2T5 733 aaKnown RBP17.48■□□□□ 0.39
CSHL1-208ENST00000558609 NSUN7Q8NE18 718 aaKnown RBP17.48■□□□□ 0.39
CSHL1-208ENST00000558609 OXER1Q8TDS5 423 aa17.48■□□□□ 0.39
CSHL1-208ENST00000558609 SUGCTQ9HAC7 445 aa17.48■□□□□ 0.39
CSHL1-208ENST00000558609 LMCD1Q9NZU5 365 aa17.48■□□□□ 0.39
CSHL1-208ENST00000558609 PADI3Q9ULW8 664 aa17.48■□□□□ 0.39
CSHL1-208ENST00000558609 EVPLQ92817 2033 aa17.48■□□□□ 0.39
CSHL1-208ENST00000558609 COL4A6Q14031 1691 aa17.48■□□□□ 0.39
CSHL1-208ENST00000558609 TTC3P53804 2025 aa17.47■□□□□ 0.39
CSHL1-208ENST00000558609 SLC37A4O43826 429 aa17.47■□□□□ 0.39
CSHL1-208ENST00000558609 OATP04181 439 aa17.47■□□□□ 0.39
CSHL1-208ENST00000558609 UGCGQ16739 394 aa17.47■□□□□ 0.39
CSHL1-208ENST00000558609 C8orf34Q49A92 452 aa17.47■□□□□ 0.39
CSHL1-208ENST00000558609 PIK3AP1Q6ZUJ8 805 aa17.47■□□□□ 0.39
CSHL1-208ENST00000558609 MIER3Q7Z3K6 550 aa17.47■□□□□ 0.39
CSHL1-208ENST00000558609 RTN4RL1Q86UN2 441 aaPredicted RBP17.47■□□□□ 0.39
CSHL1-208ENST00000558609 MICALL1Q8N3F8 863 aa17.47■□□□□ 0.39
CSHL1-208ENST00000558609 FAM20AQ96MK3 541 aa17.47■□□□□ 0.39
CSHL1-208ENST00000558609 SAMD11Q96NU1 681 aa17.47■□□□□ 0.39
CSHL1-208ENST00000558609 NAP1L4Q99733 375 aaKnown RBP17.47■□□□□ 0.39
CSHL1-208ENST00000558609 KCNMB3Q9NPA1 279 aa17.47■□□□□ 0.39
CSHL1-208ENST00000558609 MTUS1Q9ULD2 1270 aa17.47■□□□□ 0.39
CSHL1-208ENST00000558609 LOXHD1Q8IVV2 1947 aa17.47■□□□□ 0.39
CSHL1-208ENST00000558609 MRPS5P82675 430 aaKnown RBP17.46■□□□□ 0.39
CSHL1-208ENST00000558609 PRKCEQ02156 737 aa17.46■□□□□ 0.39
CSHL1-208ENST00000558609 PAK2Q13177 524 aa17.46■□□□□ 0.39
CSHL1-208ENST00000558609 KRT40Q6A162 431 aa17.46■□□□□ 0.39
CSHL1-208ENST00000558609 CRIPAKQ8N1N5 446 aa17.46■□□□□ 0.39
CSHL1-208ENST00000558609 METTL13Q8N6R0 699 aa17.46■□□□□ 0.39
CSHL1-208ENST00000558609 LINC01465Q8N7H1 131 aa17.46■□□□□ 0.39
CSHL1-208ENST00000558609 GDPD5Q8WTR4 605 aa17.46■□□□□ 0.39
CSHL1-208ENST00000558609 LINC01599Q8WXQ3 324 aa17.46■□□□□ 0.39
CSHL1-208ENST00000558609 UHRF1Q96T88 793 aaPredicted RBP17.46■□□□□ 0.39
CSHL1-208ENST00000558609 C17orf80Q9BSJ5 609 aa17.46■□□□□ 0.39
CSHL1-208ENST00000558609 TSPYL2Q9H2G4 693 aaPredicted RBP17.46■□□□□ 0.39
CSHL1-208ENST00000558609 CDHR5Q9HBB8 845 aa17.46■□□□□ 0.39
CSHL1-208ENST00000558609 LIMCH1Q9UPQ0 1083 aa17.46■□□□□ 0.39
CSHL1-208ENST00000558609 TBX3O15119 743 aa17.45■□□□□ 0.38
CSHL1-208ENST00000558609 KRT2P35908 639 aa17.45■□□□□ 0.38
CSHL1-208ENST00000558609 CRYBB1P53674 252 aaPredicted RBP17.45■□□□□ 0.38
CSHL1-208ENST00000558609 ST3GAL1Q11201 340 aa17.45■□□□□ 0.38
CSHL1-208ENST00000558609 TARBP2Q15633 366 aaKnown RBP17.45■□□□□ 0.38
CSHL1-208ENST00000558609 EARS2Q5JPH6 523 aaKnown RBP17.45■□□□□ 0.38
CSHL1-208ENST00000558609 ODR4Q5SWX8 454 aa17.45■□□□□ 0.38
CSHL1-208ENST00000558609 EFCAB12Q6NXP0 572 aa17.45■□□□□ 0.38
CSHL1-208ENST00000558609 ZNF710Q8N1W2 664 aa17.45■□□□□ 0.38
CSHL1-208ENST00000558609 FBXO22Q8NEZ5 403 aa17.45■□□□□ 0.38
CSHL1-208ENST00000558609 TMEM40Q8WWA1 233 aa17.45■□□□□ 0.38
CSHL1-208ENST00000558609 TNFRSF25Q93038 417 aa17.45■□□□□ 0.38
CSHL1-208ENST00000558609 NECAB3Q96P71 396 aaPredicted RBP17.45■□□□□ 0.38
CSHL1-208ENST00000558609 NIFKQ9BYG3 293 aaKnown RBP17.45■□□□□ 0.38
CSHL1-208ENST00000558609 RC3H2Q9HBD1 1191 aaKnown RBP17.45■□□□□ 0.38
CSHL1-208ENST00000558609 BRMS1Q9HCU9 246 aa17.45■□□□□ 0.38
CSHL1-208ENST00000558609 ERVK-5Q9HDB9 667 aa17.45■□□□□ 0.38
CSHL1-208ENST00000558609 GINS2Q9Y248 185 aa17.45■□□□□ 0.38
CSHL1-208ENST00000558609 NOC2LQ9Y3T9 749 aaKnown RBP17.45■□□□□ 0.38
CSHL1-208ENST00000558609 CCNT1O60563 726 aaKnown RBP17.44■□□□□ 0.38
CSHL1-208ENST00000558609 JAK2O60674 1132 aa17.44■□□□□ 0.38
CSHL1-208ENST00000558609 GPR32O75388 356 aa17.44■□□□□ 0.38
CSHL1-208ENST00000558609 RPS6KA5O75582 802 aa17.44■□□□□ 0.38
CSHL1-208ENST00000558609 DGKIO75912 1065 aa17.44■□□□□ 0.38
CSHL1-208ENST00000558609 STBD1O95210 358 aa17.44■□□□□ 0.38
CSHL1-208ENST00000558609 TMOD1P28289 359 aa17.44■□□□□ 0.38
CSHL1-208ENST00000558609 NR5A1Q13285 461 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms