RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 MTERF2Q49AM1 385 aa14□□□□□ -0.17
LRRC28-206ENST00000558471 C9orf50Q5SZB4 431 aa14□□□□□ -0.17
LRRC28-206ENST00000558471 FOXD4L5Q5VV16 416 aaPredicted RBP14□□□□□ -0.17
LRRC28-206ENST00000558471 DTHD1Q6ZMT9 781 aa14□□□□□ -0.17
LRRC28-206ENST00000558471 DEFB128Q7Z7B8 93 aa14□□□□□ -0.17
LRRC28-206ENST00000558471 CATSPER3Q86XQ3 398 aa14□□□□□ -0.17
LRRC28-206ENST00000558471 IGSF22Q8N9C0 903 aa14□□□□□ -0.17
LRRC28-206ENST00000558471 NEK9Q8TD19 979 aa14□□□□□ -0.17
LRRC28-206ENST00000558471 FOXD4L4Q8WXT5 416 aaPredicted RBP14□□□□□ -0.17
LRRC28-206ENST00000558471 BUD13Q9BRD0 619 aaKnown RBP eCLIP14□□□□□ -0.17
LRRC28-206ENST00000558471 FTOQ9C0B1 505 aaKnown RBP eCLIP14□□□□□ -0.17
LRRC28-206ENST00000558471 FAM49AQ9H0Q0 323 aaPredicted RBP14□□□□□ -0.17
LRRC28-206ENST00000558471 LRWD1Q9UFC0 647 aa14□□□□□ -0.17
LRRC28-206ENST00000558471 CLIC4Q9Y696 253 aa14□□□□□ -0.17
LRRC28-206ENST00000558471 SIP14410 1827 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 A0A087WWV3 80 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 MAGEB2O15479 319 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 NBNO60934 754 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 CAND2O75155 1236 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 MED24O75448 989 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 LYPLA2O95372 231 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 CHRNA1P02708 482 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 ZSCAN22P10073 491 aaPredicted RBP13.99□□□□□ -0.17
LRRC28-206ENST00000558471 YWHABP31946 246 aaKnown RBP13.99□□□□□ -0.17
LRRC28-206ENST00000558471 RFC2P35250 354 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 NPEPPSP55786 919 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 MBTPS1Q14703 1052 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 FAM26DQ5JW98 314 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 TMEM240Q5SV17 173 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 PLA2G4FQ68DD2 849 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 ZNF365Q70YC5 407 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 RSPH3Q86UC2 560 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 RPUSD2Q8IZ73 545 aaKnown RBP13.99□□□□□ -0.17
LRRC28-206ENST00000558471 KIAA0319LQ8IZA0 1049 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 ZNF579Q8NAF0 562 aaKnown RBP13.99□□□□□ -0.17
LRRC28-206ENST00000558471 POLR3CQ9BUI4 534 aaPredicted RBP13.99□□□□□ -0.17
LRRC28-206ENST00000558471 OSBPL7Q9BZF2 842 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 ARID2Q68CP9 1835 aa13.99□□□□□ -0.17
LRRC28-206ENST00000558471 VWA3AA6NCI4 1184 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 PP2D1A8MPX8 630 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 PARNO95453 639 aaKnown RBP13.98□□□□□ -0.17
LRRC28-206ENST00000558471 RPA1P27694 616 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 CDC25AP30304 524 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 CEBPZQ03701 1054 aaKnown RBP13.98□□□□□ -0.17
LRRC28-206ENST00000558471 MGAT3Q09327 533 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 TBC1D8BQ0IIM8 1120 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 TMEM62Q0P6H9 643 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 PTPAQ15257 358 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 ARL6IP4Q66PJ3 421 aaKnown RBP13.98□□□□□ -0.17
LRRC28-206ENST00000558471 EFCAB12Q6NXP0 572 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 OTUD6AQ7L8S5 288 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 TDHQ8IZJ6 230 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 NME8Q8N427 588 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 LRRC71Q8N4P6 559 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 METTL13Q8N6R0 699 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 LINC01465Q8N7H1 131 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 ERMNQ8TAM6 284 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 CEP170P1Q96L14 293 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 RAB34Q9BZG1 259 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 SUGCTQ9HAC7 445 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 TUFT1Q9NNX1 390 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 CYP26B1Q9NR63 512 aa13.98□□□□□ -0.17
LRRC28-206ENST00000558471 TRIOBPQ9H2D6 2365 aa13.97□□□□□ -0.17
LRRC28-206ENST00000558471 MAFO75444 373 aaPredicted RBP13.97□□□□□ -0.17
LRRC28-206ENST00000558471 BMP15O95972 392 aa13.97□□□□□ -0.17
LRRC28-206ENST00000558471 F13A1P00488 732 aa13.97□□□□□ -0.17
LRRC28-206ENST00000558471 FGBP02675 491 aa13.97□□□□□ -0.17
LRRC28-206ENST00000558471 CXCL10P02778 98 aa13.97□□□□□ -0.17
LRRC28-206ENST00000558471 RPLP2P05387 115 aaKnown RBP13.97□□□□□ -0.17
LRRC28-206ENST00000558471 PFKMP08237 780 aa13.97□□□□□ -0.17
LRRC28-206ENST00000558471 CLCN3P51790 818 aa13.97□□□□□ -0.17
LRRC28-206ENST00000558471 MRPS6P82932 125 aaKnown RBP13.97□□□□□ -0.17
LRRC28-206ENST00000558471 ECM1Q16610 540 aa13.97□□□□□ -0.17
LRRC28-206ENST00000558471 XKR9Q5GH70 373 aa13.97□□□□□ -0.17
LRRC28-206ENST00000558471 IER5Q5VY09 327 aa13.97□□□□□ -0.17
LRRC28-206ENST00000558471 PIGOQ8TEQ8 1089 aa13.97□□□□□ -0.17
LRRC28-206ENST00000558471 USP28Q96RU2 1077 aa13.97□□□□□ -0.17
LRRC28-206ENST00000558471 ZDHHC9Q9Y397 364 aa13.97□□□□□ -0.17
LRRC28-206ENST00000558471 CDY2AQ9Y6F7 541 aa13.97□□□□□ -0.17
LRRC28-206ENST00000558471 IGKV6-21A0A0C4DH24 114 aa13.96□□□□□ -0.17
LRRC28-206ENST00000558471 A0A1W2PPC1 479 aa13.96□□□□□ -0.17
LRRC28-206ENST00000558471 XRCC6P12956 609 aaKnown RBP eCLIP13.96□□□□□ -0.17
LRRC28-206ENST00000558471 CCT6AP40227 531 aaKnown RBP13.96□□□□□ -0.17
LRRC28-206ENST00000558471 GRIN1Q05586 938 aa13.96□□□□□ -0.17
LRRC28-206ENST00000558471 MKRN4PQ13434 485 aaPredicted RBP13.96□□□□□ -0.17
LRRC28-206ENST00000558471 DRP2Q13474 957 aa13.96□□□□□ -0.17
LRRC28-206ENST00000558471 TCTN1Q2MV58 587 aa13.96□□□□□ -0.17
LRRC28-206ENST00000558471 HAUS3Q68CZ6 603 aa13.96□□□□□ -0.17
LRRC28-206ENST00000558471 PSRC1Q6PGN9 363 aaPredicted RBP13.96□□□□□ -0.17
LRRC28-206ENST00000558471 POTEGQ6S5H5 508 aa13.96□□□□□ -0.17
LRRC28-206ENST00000558471 OTOP2Q7RTS6 562 aa13.96□□□□□ -0.17
LRRC28-206ENST00000558471 SNX29Q8TEQ0 813 aa13.96□□□□□ -0.17
LRRC28-206ENST00000558471 MMTAG2Q9BU76 263 aaKnown RBP13.96□□□□□ -0.17
LRRC28-206ENST00000558471 CELF4Q9BZC1 486 aaKnown RBP13.96□□□□□ -0.17
LRRC28-206ENST00000558471 ANKEF1Q9NU02 776 aa13.96□□□□□ -0.17
LRRC28-206ENST00000558471 TFIP11Q9UBB9 837 aaKnown RBP13.96□□□□□ -0.17
LRRC28-206ENST00000558471 RANBP2P49792 3224 aaKnown RBP13.96□□□□□ -0.18
LRRC28-206ENST00000558471 M0QZ92 97 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 BRD1O95696 1058 aa13.95□□□□□ -0.18
LRRC28-206ENST00000558471 VTNP04004 478 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms