RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 VWCEQ96DN2 955 aa13.85□□□□□ -0.19
SMAD3-205ENST00000558428 NIFKQ9BYG3 293 aaKnown RBP13.85□□□□□ -0.19
SMAD3-205ENST00000558428 ZSWIM4Q9H7M6 989 aa13.85□□□□□ -0.19
SMAD3-205ENST00000558428 WRAP73Q9P2S5 460 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-205ENST00000558428 SIP14410 1827 aa13.85□□□□□ -0.19
SMAD3-205ENST00000558428 M0QZ92 97 aa13.84□□□□□ -0.19
SMAD3-205ENST00000558428 MAGEB2O15479 319 aa13.84□□□□□ -0.19
SMAD3-205ENST00000558428 SLITRK3O94933 977 aa13.84□□□□□ -0.19
SMAD3-205ENST00000558428 FXR2P51116 673 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMAD3-205ENST00000558428 MRPS6P82932 125 aaKnown RBP13.84□□□□□ -0.19
SMAD3-205ENST00000558428 ATP2C1P98194 919 aaPredicted RBP13.84□□□□□ -0.19
SMAD3-205ENST00000558428 TBC1D8BQ0IIM8 1120 aa13.84□□□□□ -0.19
SMAD3-205ENST00000558428 RESTQ13127 1097 aa13.84□□□□□ -0.19
SMAD3-205ENST00000558428 MBTPS1Q14703 1052 aa13.84□□□□□ -0.19
SMAD3-205ENST00000558428 GPNMBQ14956 572 aa13.84□□□□□ -0.19
SMAD3-205ENST00000558428 TARBP2Q15633 366 aaKnown RBP13.84□□□□□ -0.19
SMAD3-205ENST00000558428 FAM26DQ5JW98 314 aa13.84□□□□□ -0.19
SMAD3-205ENST00000558428 PLA2G4FQ68DD2 849 aa13.84□□□□□ -0.19
SMAD3-205ENST00000558428 ANO5Q75V66 913 aa13.84□□□□□ -0.19
SMAD3-205ENST00000558428 OTOP2Q7RTS6 562 aa13.84□□□□□ -0.19
SMAD3-205ENST00000558428 METTL13Q8N6R0 699 aa13.84□□□□□ -0.19
SMAD3-205ENST00000558428 HSD17B14Q9BPX1 270 aa13.84□□□□□ -0.19
SMAD3-205ENST00000558428 SH2D3AQ9BRG2 576 aa13.84□□□□□ -0.19
SMAD3-205ENST00000558428 RAB34Q9BZG1 259 aa13.84□□□□□ -0.19
SMAD3-205ENST00000558428 CDY2AQ9Y6F7 541 aa13.84□□□□□ -0.19
SMAD3-205ENST00000558428 ARID2Q68CP9 1835 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 ZBBXA8MT70 800 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 CHRNA1P02708 482 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 CXCL10P02778 98 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 ACTN1P12814 892 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 TMOD1P28289 359 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 YWHABP31946 246 aaKnown RBP13.83□□□□□ -0.2
SMAD3-205ENST00000558428 PRPHP41219 470 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 CLCN3P51790 818 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 MGAT3Q09327 533 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 TMEM62Q0P6H9 643 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 BECN1Q14457 450 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 IER5Q5VY09 327 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 EFCAB12Q6NXP0 572 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 DTHD1Q6ZMT9 781 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 OTUD6AQ7L8S5 288 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 KIAA0319LQ8IZA0 1049 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 NME8Q8N427 588 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 LRRC71Q8N4P6 559 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 ERMNQ8TAM6 284 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 HERVK_113Q902F9 699 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 CEP170P1Q96L14 293 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 MTIF3Q9H2K0 278 aaKnown RBP13.83□□□□□ -0.2
SMAD3-205ENST00000558428 ZSCAN16Q9H4T2 348 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-205ENST00000558428 LRWD1Q9UFC0 647 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 TRPV2Q9Y5S1 764 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 MYH15Q9Y2K3 1946 aa13.83□□□□□ -0.2
SMAD3-205ENST00000558428 MICAL3Q7RTP6 2002 aa13.82□□□□□ -0.2
SMAD3-205ENST00000558428 RBAK-RBAKDNI3L0D1 243 aa13.82□□□□□ -0.2
SMAD3-205ENST00000558428 BMP15O95972 392 aa13.82□□□□□ -0.2
SMAD3-205ENST00000558428 NPEPPSP55786 919 aa13.82□□□□□ -0.2
SMAD3-205ENST00000558428 PDIA5Q14554 519 aa13.82□□□□□ -0.2
SMAD3-205ENST00000558428 SF3A1Q15459 793 aaKnown RBP13.82□□□□□ -0.2
SMAD3-205ENST00000558428 LRIT3Q3SXY7 679 aa13.82□□□□□ -0.2
SMAD3-205ENST00000558428 XKR9Q5GH70 373 aa13.82□□□□□ -0.2
SMAD3-205ENST00000558428 HAUS3Q68CZ6 603 aa13.82□□□□□ -0.2
SMAD3-205ENST00000558428 FAM173BQ6P4H8 233 aa13.82□□□□□ -0.2
SMAD3-205ENST00000558428 CNKSR3Q6P9H4 555 aa13.82□□□□□ -0.2
SMAD3-205ENST00000558428 CEP89Q96ST8 783 aa13.82□□□□□ -0.2
SMAD3-205ENST00000558428 MAP7D2Q96T17 732 aa13.82□□□□□ -0.2
SMAD3-205ENST00000558428 SUGCTQ9HAC7 445 aa13.82□□□□□ -0.2
SMAD3-205ENST00000558428 TUFT1Q9NNX1 390 aa13.82□□□□□ -0.2
SMAD3-205ENST00000558428 CYP26B1Q9NR63 512 aa13.82□□□□□ -0.2
SMAD3-205ENST00000558428 AKT3Q9Y243 479 aa13.82□□□□□ -0.2
SMAD3-205ENST00000558428 ZBTB39O15060 712 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 MED24O75448 989 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 LYPLA2O95372 231 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 VTNP04004 478 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 SPATA31C1P0DKV0 1188 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 GHRP10912 638 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 PDIA4P13667 645 aaKnown RBP13.81□□□□□ -0.2
SMAD3-205ENST00000558428 RPA1P27694 616 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 IL17AQ16552 155 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 FOXD4L5Q5VV16 416 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-205ENST00000558428 ARL6IP4Q66PJ3 421 aaKnown RBP13.81□□□□□ -0.2
SMAD3-205ENST00000558428 CATSPER3Q86XQ3 398 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 LINC01465Q8N7H1 131 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 IGSF22Q8N9C0 903 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 DBF4BQ8NFT6 615 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 FOXD4L4Q8WXT5 416 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-205ENST00000558428 CCDC43Q96MW1 224 aaKnown RBP13.81□□□□□ -0.2
SMAD3-205ENST00000558428 PPP1R16BQ96T49 567 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 JPH2Q9BR39 696 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-205ENST00000558428 POLR3CQ9BUI4 534 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-205ENST00000558428 CELF4Q9BZC1 486 aaKnown RBP13.81□□□□□ -0.2
SMAD3-205ENST00000558428 OSBPL7Q9BZF2 842 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 CXXC1Q9P0U4 656 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-205ENST00000558428 GINS2Q9Y248 185 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 PPME1Q9Y570 386 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 STK24Q9Y6E0 443 aa13.81□□□□□ -0.2
SMAD3-205ENST00000558428 A0A087WWV3 80 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 VWA3AA6NCI4 1184 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 MAFO75444 373 aaPredicted RBP13.8□□□□□ -0.2
SMAD3-205ENST00000558428 BAIAP3O94812 1187 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 CCT6AP40227 531 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms