RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 ITGB1P05556 798 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 ZSCAN22P10073 491 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 GUCY1B3Q02153 619 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 SYNE3Q6ZMZ3 975 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 TSHZ1Q6ZSZ6 1077 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 CATIPQ7Z7H3 387 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 RSPH3Q86UC2 560 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 FERMT3Q86UX7 667 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 TMTC2Q8N394 836 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 FANCBQ8NB91 859 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 GIMAP8Q8ND71 665 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 MFSD14AQ96MC6 490 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 AIFM3Q96NN9 605 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 PCYT2Q99447 389 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 PHOX2BQ99453 314 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 PLVAPQ9BX97 442 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 PKD2L1Q9P0L9 805 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 CLEC1BQ9P126 229 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 TUBE1Q9UJT0 475 aa12.71□□□□□ -0.37
RABGGTA-204ENST00000558376 PLXNA4Q9HCM2 1894 aa12.71□□□□□ -0.38
RABGGTA-204ENST00000558376 IGBP1P78318 339 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 MRPS6P82932 125 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 NTRK3Q16288 839 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 FAM173BQ6P4H8 233 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 FAM184AQ8NB25 1140 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 EDAQ92838 391 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 CUL5Q93034 780 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 GPRASP2Q96D09 838 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 POP1Q99575 1024 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 SPZ1Q9BXG8 430 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 FAM49AQ9H0Q0 323 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 ERAP1Q9NZ08 941 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 UBIAD1Q9Y5Z9 338 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 CACNA1HO95180 2353 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 EYA4O95677 639 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 GATMP50440 423 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 PAN2Q504Q3 1202 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 MCTP1Q6DN14 999 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 CMTR2Q8IYT2 770 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 KLHL23Q8NBE8 558 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 GLG1Q92896 1179 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 P2RX5Q93086 422 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 RRP36Q96EU6 259 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 MTA3Q9BTC8 594 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 SMARCAD1Q9H4L7 1026 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 PCDHGC5Q9Y5F6 944 aa12.7□□□□□ -0.38
RABGGTA-204ENST00000558376 EVPLQ92817 2033 aa12.69□□□□□ -0.38
RABGGTA-204ENST00000558376 hCG_1642624A0A1W2PR95 340 aa12.69□□□□□ -0.38
RABGGTA-204ENST00000558376 PLEKHA8P1O95397 391 aa12.69□□□□□ -0.38
RABGGTA-204ENST00000558376 INSRRP14616 1297 aa12.69□□□□□ -0.38
RABGGTA-204ENST00000558376 NDUFV1P49821 464 aa12.69□□□□□ -0.38
RABGGTA-204ENST00000558376 TMEM62Q0P6H9 643 aa12.69□□□□□ -0.38
RABGGTA-204ENST00000558376 UBE2SQ16763 222 aa12.69□□□□□ -0.38
RABGGTA-204ENST00000558376 IER5LQ5T953 404 aa12.69□□□□□ -0.38
RABGGTA-204ENST00000558376 SRBD1Q8N5C6 995 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-204ENST00000558376 EFHBQ8N7U6 833 aa12.69□□□□□ -0.38
RABGGTA-204ENST00000558376 PRSS33Q8NF86 280 aa12.69□□□□□ -0.38
RABGGTA-204ENST00000558376 POF1BQ8WVV4 589 aa12.69□□□□□ -0.38
RABGGTA-204ENST00000558376 ORC3Q9UBD5 711 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-204ENST00000558376 FNDC1Q4ZHG4 1894 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 GLP2RO95838 553 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 F13A1P00488 732 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 SMARCA1P28370 1054 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 RTN1Q16799 776 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 NAALADL2Q58DX5 795 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 BMP8AQ7Z5Y6 402 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 NPAS4Q8IUM7 802 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 TRAPPC12Q8WVT3 735 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 CDHR1Q96JP9 859 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 MAP3K14Q99558 947 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 TMX1Q9H3N1 280 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 PSTPIP2Q9H939 334 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 GDPD2Q9HCC8 539 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 JADE2Q9NQC1 790 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 PADI3Q9ULW8 664 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 TMEM221A6NGB7 291 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 RRN3P2A6NIE6 340 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 LOC730098B7Z3J9 87 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 M0R296 226 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 NRIP1P48552 1158 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 IER5Q5VY09 327 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 TRIM67Q6ZTA4 783 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 RBM23Q86U06 439 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 SMRP1Q8NCR6 262 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 CTCFLQ8NI51 663 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 GBP4Q96PP9 640 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 SLC26A6Q9BXS9 759 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 TRPV2Q9Y5S1 764 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 SQORQ9Y6N5 450 aa12.68□□□□□ -0.38
RABGGTA-204ENST00000558376 MYO10Q9HD67 2058 aa12.67□□□□□ -0.38
RABGGTA-204ENST00000558376 H3BQV1 296 aa12.67□□□□□ -0.38
RABGGTA-204ENST00000558376 DDAH1O94760 285 aa12.67□□□□□ -0.38
RABGGTA-204ENST00000558376 PDCP20941 246 aa12.67□□□□□ -0.38
RABGGTA-204ENST00000558376 HMGN5P82970 282 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-204ENST00000558376 COASYQ13057 564 aa12.67□□□□□ -0.38
RABGGTA-204ENST00000558376 MTMR1Q13613 665 aa12.67□□□□□ -0.38
RABGGTA-204ENST00000558376 PLCB4Q15147 1175 aa12.67□□□□□ -0.38
RABGGTA-204ENST00000558376 TPRNQ4KMQ1 711 aa12.67□□□□□ -0.38
RABGGTA-204ENST00000558376 CLEC17AQ6ZS10 378 aa12.67□□□□□ -0.38
RABGGTA-204ENST00000558376 BARX2Q9UMQ3 279 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms