RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 IL17RAQ96F46 866 aa13.47□□□□□ -0.25
HERC1-202ENST00000558324 RIT2Q99578 217 aa13.47□□□□□ -0.25
HERC1-202ENST00000558324 PADI3Q9ULW8 664 aa13.47□□□□□ -0.25
HERC1-202ENST00000558324 MYO9BQ13459 2157 aa13.47□□□□□ -0.25
HERC1-202ENST00000558324 ADGRA3Q8IWK6 1321 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 CCDC194A0A1B0GVG4 234 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 CTDNEP1O95476 244 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 SEC24BO95487 1268 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 VTNP04004 478 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 XBP1P17861 261 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 CLCN3P51790 818 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 FOSBP53539 338 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 PRKCEQ02156 737 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 NFX1Q12986 1120 aaKnown RBP13.46□□□□□ -0.25
HERC1-202ENST00000558324 KIZQ2M2Z5 673 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 LETM2Q2VYF4 491 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 GALNT17Q6IS24 598 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 MIER3Q7Z3K6 550 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 KRT25Q7Z3Z0 450 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 KIAA0319LQ8IZA0 1049 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 NME8Q8N427 588 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 FIBCD1Q8N539 461 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 OXER1Q8TDS5 423 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 TMEM40Q8WWA1 233 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 FAM167AQ96KS9 214 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 PHF20Q9BVI0 1012 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 CDHR5Q9HBB8 845 aa13.46□□□□□ -0.25
HERC1-202ENST00000558324 ORC3Q9UBD5 711 aaPredicted RBP13.46□□□□□ -0.25
HERC1-202ENST00000558324 DDX25Q9UHL0 483 aaKnown RBP13.46□□□□□ -0.25
HERC1-202ENST00000558324 KDM3AQ9Y4C1 1321 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 COL4A6Q14031 1691 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 SLC37A4O43826 429 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 ZNF862O60290 1169 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 RPS6KA5O75582 802 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 PSMD10O75832 226 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 CSPG5O95196 566 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 OATP04181 439 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 CTNNB1P35222 781 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 KCNQ1P51787 676 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 NEK4P51957 841 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 JAK3P52333 1124 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 BTG3Q14201 252 aaPredicted RBP13.45□□□□□ -0.26
HERC1-202ENST00000558324 ME3Q16798 604 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 Q4G0T1 1027 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 PIK3AP1Q6ZUJ8 805 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 RTN4RL1Q86UN2 441 aaPredicted RBP13.45□□□□□ -0.26
HERC1-202ENST00000558324 TMEM192Q8IY95 271 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 LRRC71Q8N4P6 559 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 ADAMTS19Q8TE59 1207 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 SAMD11Q96NU1 681 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 OSMRQ99650 979 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 FTHL17Q9BXU8 183 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 TMX1Q9H3N1 280 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 CEP131Q9UPN4 1083 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 NOC2LQ9Y3T9 749 aaKnown RBP13.45□□□□□ -0.26
HERC1-202ENST00000558324 SQORQ9Y6N5 450 aa13.45□□□□□ -0.26
HERC1-202ENST00000558324 PRRC2BQ5JSZ5 2229 aaKnown RBP13.44□□□□□ -0.26
HERC1-202ENST00000558324 CYP3A7-CYP3A51PA0A087WV96 503 aa13.44□□□□□ -0.26
HERC1-202ENST00000558324 TMEM150BA6NC51 233 aa13.44□□□□□ -0.26
HERC1-202ENST00000558324 CYP3A7P24462 503 aa13.44□□□□□ -0.26
HERC1-202ENST00000558324 SFNP31947 248 aa13.44□□□□□ -0.26
HERC1-202ENST00000558324 GPM6BQ13491 265 aa13.44□□□□□ -0.26
HERC1-202ENST00000558324 PAN2Q504Q3 1202 aaKnown RBP13.44□□□□□ -0.26
HERC1-202ENST00000558324 FAM177A1Q8N128 213 aaPredicted RBP13.44□□□□□ -0.26
HERC1-202ENST00000558324 ETNPPLQ8TBG4 499 aa13.44□□□□□ -0.26
HERC1-202ENST00000558324 GTF3C6Q969F1 213 aa13.44□□□□□ -0.26
HERC1-202ENST00000558324 ZNF668Q96K58 619 aaPredicted RBP13.44□□□□□ -0.26
HERC1-202ENST00000558324 NECAB3Q96P71 396 aaPredicted RBP13.44□□□□□ -0.26
HERC1-202ENST00000558324 MAP7D2Q96T17 732 aa13.44□□□□□ -0.26
HERC1-202ENST00000558324 RC3H2Q9HBD1 1191 aaKnown RBP13.44□□□□□ -0.26
HERC1-202ENST00000558324 NRBP2Q9NSY0 501 aa13.44□□□□□ -0.26
HERC1-202ENST00000558324 LMCD1Q9NZU5 365 aa13.44□□□□□ -0.26
HERC1-202ENST00000558324 SEPT9Q9UHD8 586 aaPredicted RBP13.44□□□□□ -0.26
HERC1-202ENST00000558324 AKT3Q9Y243 479 aa13.44□□□□□ -0.26
HERC1-202ENST00000558324 DENND3A2RUS2 1198 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 FAM205CA6NFA0 338 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 MGEA5O60502 916 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 DGKIO75912 1065 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 GATMP50440 423 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 PTPROQ16827 1216 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 AAK1Q2M2I8 961 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 MTERF2Q49AM1 385 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 EFCAB12Q6NXP0 572 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 MOXD1Q6UVY6 613 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 NEK8Q86SG6 692 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 NPAS4Q8IUM7 802 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 BANK1Q8NDB2 785 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 WASF1Q92558 559 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 HLA-CQ95604 372 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 MBOAT7Q96N66 472 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 SCLT1Q96NL6 688 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 SH2D3AQ9BRG2 576 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 ERVK-5Q9HDB9 667 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 LRFN2Q9ULH4 789 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 ST3GAL5Q9UNP4 418 aa13.43□□□□□ -0.26
HERC1-202ENST00000558324 SPTBN5Q9NRC6 3674 aaKnown RBP13.43□□□□□ -0.26
HERC1-202ENST00000558324 REV3LO60673 3130 aa13.42□□□□□ -0.26
HERC1-202ENST00000558324 H3BNC9 293 aa13.42□□□□□ -0.26
HERC1-202ENST00000558324 MAGEB2O15479 319 aa13.42□□□□□ -0.26
HERC1-202ENST00000558324 CCNT1O60563 726 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms