RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 LRRC26Q2I0M4 334 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 TRIM60Q495X7 471 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 XKR9Q5GH70 373 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 SPECC1Q5M775 1068 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 RESP18Q5W5W9 173 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 GDF6Q6KF10 455 aaPredicted RBP11.69□□□□□ -0.54
LRRC28-204ENST00000558172 CCDC73Q6ZRK6 1079 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 TRMT1LQ7Z2T5 733 aaKnown RBP11.69□□□□□ -0.54
LRRC28-204ENST00000558172 RETREG2Q8NC44 543 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 LMBR1Q8WVP7 490 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 EPSTI1Q96J88 318 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 CEP170P1Q96L14 293 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 PNMA5Q96PV4 448 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 PYM1Q9BRP8 204 aaKnown RBP11.69□□□□□ -0.54
LRRC28-204ENST00000558172 CYP26B1Q9NR63 512 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 DDX19AQ9NUU7 478 aaKnown RBP11.69□□□□□ -0.54
LRRC28-204ENST00000558172 ATP11BQ9Y2G3 1177 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 PCDHA2Q9Y5H9 948 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 A0A1W2PQ27 194 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 A0A1W2PQ64 194 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 A0A1W2PQD8 194 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 MBLAC1A4D2B0 266 aaPredicted RBP11.68□□□□□ -0.54
LRRC28-204ENST00000558172 TREHO43280 583 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 PQBP1O60828 265 aaKnown RBP11.68□□□□□ -0.54
LRRC28-204ENST00000558172 EYA4O95677 639 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 KLRC1P26715 233 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 RFC5P40937 340 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 RARRES1P49788 294 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 IGBP1P78318 339 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 TBC1D8BQ0IIM8 1120 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 PTK7Q13308 1070 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 GRB10Q13322 594 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 KARSQ15046 597 aaKnown RBP11.68□□□□□ -0.54
LRRC28-204ENST00000558172 MTERF2Q49AM1 385 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 TMEM119Q4V9L6 283 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 MARCH8Q5T0T0 291 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 RRAGBQ5VZM2 374 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 TAF2Q6P1X5 1199 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 POTEGQ6S5H5 508 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 SHC4Q6S5L8 630 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 MTHFD1LQ6UB35 978 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 USP49Q70CQ1 688 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 CCDC155Q8N6L0 562 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 PIGOQ8TEQ8 1089 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 GBP4Q96PP9 640 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 GDPD2Q9HCC8 539 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 TUBE1Q9UJT0 475 aa11.68□□□□□ -0.54
LRRC28-204ENST00000558172 SMIM35A0A1B0GVV1 85 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 ARHGEF35A5YM69 484 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 ZBTB42B2RXF5 422 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 E9PMD0 336 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 ZBTB39O15060 712 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 GAS2O43903 313 aaKnown RBP11.67□□□□□ -0.54
LRRC28-204ENST00000558172 B4GALT4O60513 344 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 MAFO75444 373 aaPredicted RBP11.67□□□□□ -0.54
LRRC28-204ENST00000558172 DGAT1O75907 488 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 CLTBP09497 229 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 CYP2C9P11712 490 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 TMOD1P28289 359 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 DNM2P50570 870 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 NPEPPSP55786 919 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 HIC1Q14526 733 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 PLA2G4FQ68DD2 849 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 RPAINQ86UA6 219 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 RSPH3Q86UC2 560 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 SERINC5Q86VE9 423 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 ZNF710Q8N1W2 664 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 NME8Q8N427 588 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 TMEM87AQ8NBN3 555 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 PPP1R13LQ8WUF5 828 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 SLC7A3Q8WY07 619 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 CEP89Q96ST8 783 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 TRPV6Q9H1D0 765 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 CUEDC2Q9H467 287 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 TRMT13Q9NUP7 481 aaKnown RBP11.67□□□□□ -0.54
LRRC28-204ENST00000558172 STK17AQ9UEE5 414 aa11.67□□□□□ -0.54
LRRC28-204ENST00000558172 PDE4DIPQ5VU43 2346 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 IGKV6-21A0A0C4DH24 114 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 FAM237AA0A1B0GTK4 181 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 EVI5O60447 810 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 CAND2O75155 1236 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 C22orf31O95567 290 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 PLCG1P19174 1290 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 STAT6P42226 847 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 POLGP54098 1239 aaPredicted RBP11.66□□□□□ -0.54
LRRC28-204ENST00000558172 ZNF200P98182 395 aaPredicted RBP11.66□□□□□ -0.54
LRRC28-204ENST00000558172 CDC42EP1Q00587 391 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 FAAP100Q0VG06 881 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 BFSP2Q13515 415 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 EFCAB12Q6NXP0 572 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 SYT2Q8N9I0 419 aaPredicted RBP11.66□□□□□ -0.54
LRRC28-204ENST00000558172 IQUBQ8NA54 791 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 CAGE1Q8TC20 777 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 TRAPPC12Q8WVT3 735 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 TCP11Q8WWU5 503 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 MRPS27Q92552 414 aaKnown RBP11.66□□□□□ -0.54
LRRC28-204ENST00000558172 RAD54LQ92698 747 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 DPF3Q92784 378 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 PLIN2Q99541 437 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 BHMT2Q9H2M3 363 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms