RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 BHMT2Q9H2M3 363 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 C17orf75Q9HAS0 396 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 XPNPEP3Q9NQH7 507 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 BLOC1S4Q9NUP1 217 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 TMEM63CQ9P1W3 806 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 ODF2LQ9ULJ1 636 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 SYNRGQ9UMZ2 1314 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 COL1A2P08123 1366 aa13.8□□□□□ -0.2
TPM1-209ENST00000558072 RRN3P2A6NIE6 340 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 E9PMD0 336 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 H3BRB1 525 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 MAGEB2O15479 319 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 TBCAO75347 108 aaKnown RBP13.79□□□□□ -0.2
TPM1-209ENST00000558072 LGALS2P05162 132 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 RPLP2P05387 115 aaKnown RBP13.79□□□□□ -0.2
TPM1-209ENST00000558072 GNAT1P11488 350 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 GAP43P17677 238 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 GUCY2CP25092 1073 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 CST5P28325 142 aaPredicted RBP13.79□□□□□ -0.2
TPM1-209ENST00000558072 AFMP43652 599 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 RARRES1P49788 294 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 SLC12A3P55017 1021 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 MDM2Q00987 491 aaPredicted RBP13.79□□□□□ -0.2
TPM1-209ENST00000558072 MCM6Q14566 821 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 KCNB1Q14721 858 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 CAMK4Q16566 473 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 UGCGQ16739 394 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 XKR9Q5GH70 373 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 NT5DC1Q5TFE4 455 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 STXBP4Q6ZWJ1 553 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 GPBP1Q86WP2 473 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 ZNF710Q8N1W2 664 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 SLC7A3Q8WY07 619 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 CEP170P1Q96L14 293 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 DRC1Q96MC2 740 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 TSEN34Q9BSV6 310 aaKnown RBP13.79□□□□□ -0.2
TPM1-209ENST00000558072 TRIM9Q9C026 710 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 NAT10Q9H0A0 1025 aaKnown RBP13.79□□□□□ -0.2
TPM1-209ENST00000558072 TUT1Q9H6E5 874 aaKnown RBP13.79□□□□□ -0.2
TPM1-209ENST00000558072 ANO10Q9NW15 660 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 SEL1LQ9UBV2 794 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 SEPT9Q9UHD8 586 aaPredicted RBP13.79□□□□□ -0.2
TPM1-209ENST00000558072 COL4A3BPQ9Y5P4 624 aa13.79□□□□□ -0.2
TPM1-209ENST00000558072 MYH9P35579 1960 aaKnown RBP13.78□□□□□ -0.2
TPM1-209ENST00000558072 A0A087WWV3 80 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 C6orf222P0C671 652 aaPredicted RBP13.78□□□□□ -0.2
TPM1-209ENST00000558072 ZNF286BP0CG31 522 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 ASIC1P78348 528 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 STIM1Q13586 685 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 ECM1Q16610 540 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 ZSCAN23Q3MJ62 389 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 GNASQ5JWF2 1037 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 PADI6Q6TGC4 694 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 UNC13DQ70J99 1090 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 RETREG2Q8NC44 543 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 SPATA20Q8TB22 786 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 PIGOQ8TEQ8 1089 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 TCP11Q8WWU5 503 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 KIFAP3Q92845 792 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 DEFB118Q96PH6 123 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 MTG1Q9BT17 334 aaPredicted RBP13.78□□□□□ -0.2
TPM1-209ENST00000558072 RNF208Q9H0X6 261 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 CYP26B1Q9NR63 512 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 TUBE1Q9UJT0 475 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 TRPC6Q9Y210 931 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 WDR81Q562E7 1941 aa13.78□□□□□ -0.2
TPM1-209ENST00000558072 MOXD2PA6NHM9 499 aa13.77□□□□□ -0.21
TPM1-209ENST00000558072 H0YCG3 227 aa13.77□□□□□ -0.21
TPM1-209ENST00000558072 RPN1P04843 607 aaKnown RBP13.77□□□□□ -0.21
TPM1-209ENST00000558072 CYP11B2P19099 503 aa13.77□□□□□ -0.21
TPM1-209ENST00000558072 TMOD1P28289 359 aa13.77□□□□□ -0.21
TPM1-209ENST00000558072 DNM2P50570 870 aa13.77□□□□□ -0.21
TPM1-209ENST00000558072 POLGP54098 1239 aaPredicted RBP13.77□□□□□ -0.21
TPM1-209ENST00000558072 CDC42EP1Q00587 391 aa13.77□□□□□ -0.21
TPM1-209ENST00000558072 DPYDQ12882 1025 aa13.77□□□□□ -0.21
TPM1-209ENST00000558072 DHX8Q14562 1220 aaKnown RBP13.77□□□□□ -0.21
TPM1-209ENST00000558072 LHX8Q68G74 356 aa13.77□□□□□ -0.21
TPM1-209ENST00000558072 RINT1Q6NUQ1 792 aa13.77□□□□□ -0.21
TPM1-209ENST00000558072 PHLPP2Q6ZVD8 1323 aa13.77□□□□□ -0.21
TPM1-209ENST00000558072 TRMT1LQ7Z2T5 733 aaKnown RBP13.77□□□□□ -0.21
TPM1-209ENST00000558072 DDX12PQ92771 950 aa13.77□□□□□ -0.21
TPM1-209ENST00000558072 ARMC5Q96C12 935 aa13.77□□□□□ -0.21
TPM1-209ENST00000558072 PCYT2Q99447 389 aa13.77□□□□□ -0.21
TPM1-209ENST00000558072 ATP6V0A4Q9HBG4 840 aa13.77□□□□□ -0.21
TPM1-209ENST00000558072 EXOC1Q9NV70 894 aa13.77□□□□□ -0.21
TPM1-209ENST00000558072 LARSQ9P2J5 1176 aaKnown RBP13.77□□□□□ -0.21
TPM1-209ENST00000558072 PCDHA5Q9Y5H7 936 aa13.77□□□□□ -0.21
TPM1-209ENST00000558072 NRCAMQ92823 1304 aa13.76□□□□□ -0.21
TPM1-209ENST00000558072 TMEM150BA6NC51 233 aa13.76□□□□□ -0.21
TPM1-209ENST00000558072 ZNF862O60290 1169 aa13.76□□□□□ -0.21
TPM1-209ENST00000558072 ADAMTS4O75173 837 aa13.76□□□□□ -0.21
TPM1-209ENST00000558072 FAM13AO94988 1023 aa13.76□□□□□ -0.21
TPM1-209ENST00000558072 F2P00734 622 aa13.76□□□□□ -0.21
TPM1-209ENST00000558072 MYL3P08590 195 aa13.76□□□□□ -0.21
TPM1-209ENST00000558072 SARSP49591 514 aaKnown RBP13.76□□□□□ -0.21
TPM1-209ENST00000558072 RTP1P59025 263 aa13.76□□□□□ -0.21
TPM1-209ENST00000558072 CHMP4BP1P59074 171 aa13.76□□□□□ -0.21
TPM1-209ENST00000558072 ZNF445P59923 1031 aa13.76□□□□□ -0.21
TPM1-209ENST00000558072 PSMC6P62333 389 aa13.76□□□□□ -0.21
TPM1-209ENST00000558072 TBC1D8BQ0IIM8 1120 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms