RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 U2AF1L4Q8WU68 220 aaKnown RBP10.86□□□□□ -0.67
TMEM260-213ENST00000556929 LARP4BQ92615 738 aaKnown RBP10.86□□□□□ -0.67
TMEM260-213ENST00000556929 DHX58Q96C10 678 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 LRRC27Q9C0I9 530 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 GOLPH3LQ9H4A5 285 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 MAGEF1Q9HAY2 307 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 ANKEF1Q9NU02 776 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 SEPT9Q9UHD8 586 aaPredicted RBP10.86□□□□□ -0.67
TMEM260-213ENST00000556929 DBR1Q9UK59 544 aaKnown RBP10.86□□□□□ -0.67
TMEM260-213ENST00000556929 MYH11P35749 1972 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 DNM1LO00429 736 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 ZNF862O60290 1169 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 KINO60870 393 aaKnown RBP10.85□□□□□ -0.67
TMEM260-213ENST00000556929 EYA4O95677 639 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 LIG1P18858 919 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 ATP4AP20648 1035 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 MARK3P27448 753 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 ACLYP53396 1101 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 AMPD3Q01432 767 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 MFSD10Q14728 455 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 NFKBIBQ15653 356 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 E2F4Q16254 413 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 SKOR2Q2VWA4 1001 aaPredicted RBP10.85□□□□□ -0.67
TMEM260-213ENST00000556929 XKR9Q5GH70 373 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 ZNF484Q5JVG2 852 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 CCSAPQ6IQ19 270 aaPredicted RBP10.85□□□□□ -0.67
TMEM260-213ENST00000556929 SV2BQ7L1I2 683 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 TRMT1LQ7Z2T5 733 aaKnown RBP10.85□□□□□ -0.67
TMEM260-213ENST00000556929 TRIM50Q86XT4 487 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 EXOC8Q8IYI6 725 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 FMR1NBQ8N0W7 255 aaPredicted RBP10.85□□□□□ -0.67
TMEM260-213ENST00000556929 ANKLE1Q8NAG6 615 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 ENGASEQ8NFI3 743 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 PIGOQ8TEQ8 1089 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 ATP8B4Q8TF62 1192 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 RAD54LQ92698 747 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 VTI1AQ96AJ9 217 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 GLT1D1Q96MS3 346 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 TIGD1Q96MW7 591 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 NIFKQ9BYG3 293 aaKnown RBP10.85□□□□□ -0.67
TMEM260-213ENST00000556929 CRISPLD2Q9H0B8 497 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 WRAP73Q9P2S5 460 aaPredicted RBP10.85□□□□□ -0.67
TMEM260-213ENST00000556929 SERTAD1Q9UHV2 236 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 HOOK1Q9UJC3 728 aaKnown RBP10.85□□□□□ -0.67
TMEM260-213ENST00000556929 PPME1Q9Y570 386 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 COL1A2P08123 1366 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 SCN10AQ9Y5Y9 1956 aa10.85□□□□□ -0.67
TMEM260-213ENST00000556929 A0A087X0B3 334 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 ARHGEF35A5YM69 484 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 HAS3O00219 553 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 NR1I2O75469 434 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 SSBP05455 408 aaKnown RBP eCLIP10.84□□□□□ -0.67
TMEM260-213ENST00000556929 SLFN14P0C7P3 912 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 PLA2G4BP0C869 781 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 GJA8P48165 433 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 CHMP4BP1P59074 171 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 PSMC6P62333 389 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 SNW1Q13573 536 aaKnown RBP10.84□□□□□ -0.67
TMEM260-213ENST00000556929 KIAA0753Q2KHM9 967 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 LONRF3Q496Y0 759 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 MTERF2Q49AM1 385 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 CXCL17Q6UXB2 119 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 KRBA2Q6ZNG9 492 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 ANO5Q75V66 913 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 SYT2Q8N9I0 419 aaPredicted RBP10.84□□□□□ -0.67
TMEM260-213ENST00000556929 KAT2BQ92831 832 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 CEP170P1Q96L14 293 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 SEZ6LQ9BYH1 1024 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 BHMT2Q9H2M3 363 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 TNMDQ9H2S6 317 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 RNPEPQ9H4A4 650 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 CYP26B1Q9NR63 512 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 BLOC1S4Q9NUP1 217 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 PHF24Q9UPV7 400 aa10.84□□□□□ -0.67
TMEM260-213ENST00000556929 A0A1W2PQ45 241 aaPredicted RBP10.83□□□□□ -0.68
TMEM260-213ENST00000556929 A0A1W2PQY0 241 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 RRN3P2A6NIE6 340 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 STBD1O95210 358 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 KRT18P05783 430 aaKnown RBP10.83□□□□□ -0.68
TMEM260-213ENST00000556929 GNAT1P11488 350 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 INSRRP14616 1297 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 RARRES1P49788 294 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 PTPN11Q06124 597 aaPredicted RBP10.83□□□□□ -0.68
TMEM260-213ENST00000556929 DHX8Q14562 1220 aaKnown RBP10.83□□□□□ -0.68
TMEM260-213ENST00000556929 MCM6Q14566 821 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 NAALADL2Q58DX5 795 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 PLA2G4FQ68DD2 849 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 KCNK18Q7Z418 384 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 C7orf31Q8N865 590 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 GPT2Q8TD30 523 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 JPH2Q9BR39 696 aaPredicted RBP10.83□□□□□ -0.68
TMEM260-213ENST00000556929 STARD7Q9NQZ5 370 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 DACT1Q9NYF0 836 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 KCND2Q9NZV8 630 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 EVPLQ92817 2033 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 NRCAMQ92823 1304 aa10.83□□□□□ -0.68
TMEM260-213ENST00000556929 A0A087WWV3 80 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 A0A0U1RQG5 324 aaPredicted RBP10.82□□□□□ -0.68
TMEM260-213ENST00000556929 C17orf102A2RUQ5 167 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 ZBTB39O15060 712 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms