RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 RSPO2Q6UXX9 243 aaPredicted RBP6.01□□□□□ -1.45
PRPF39-210ENST00000556718 KCTD1Q719H9 257 aa6.01□□□□□ -1.45
PRPF39-210ENST00000556718 SH3RF2Q8TEC5 729 aa6.01□□□□□ -1.45
PRPF39-210ENST00000556718 OR14A2Q96R54 314 aa6.01□□□□□ -1.45
PRPF39-210ENST00000556718 METTL14Q9HCE5 456 aaKnown RBP6.01□□□□□ -1.45
PRPF39-210ENST00000556718 CD2APQ9Y5K6 639 aa6.01□□□□□ -1.45
PRPF39-210ENST00000556718 SLC30A1Q9Y6M5 507 aa6.01□□□□□ -1.45
PRPF39-210ENST00000556718 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6□□□□□ -1.45
PRPF39-210ENST00000556718 BLACEA4D250 179 aa6□□□□□ -1.45
PRPF39-210ENST00000556718 CDC14BO60729 498 aa6□□□□□ -1.45
PRPF39-210ENST00000556718 TKFCQ3LXA3 575 aa6□□□□□ -1.45
PRPF39-210ENST00000556718 POLNQ7Z5Q5 900 aa6□□□□□ -1.45
PRPF39-210ENST00000556718 ZNF808Q8N4W9 903 aaPredicted RBP6□□□□□ -1.45
PRPF39-210ENST00000556718 AMER2Q8N7J2 671 aa6□□□□□ -1.45
PRPF39-210ENST00000556718 NEU4Q8WWR8 484 aaPredicted RBP6□□□□□ -1.45
PRPF39-210ENST00000556718 MFSD3Q96ES6 412 aa6□□□□□ -1.45
PRPF39-210ENST00000556718 AARSD1Q9BTE6 412 aaKnown RBP6□□□□□ -1.45
PRPF39-210ENST00000556718 PLA2G12BQ9BX93 195 aa6□□□□□ -1.45
PRPF39-210ENST00000556718 TCRBV5S4A2TA0A5A2 114 aa5.99□□□□□ -1.45
PRPF39-210ENST00000556718 ADCY3O60266 1144 aa5.99□□□□□ -1.45
PRPF39-210ENST00000556718 RAB11FIP3O75154 756 aa5.99□□□□□ -1.45
PRPF39-210ENST00000556718 SOD2P04179 222 aa5.99□□□□□ -1.45
PRPF39-210ENST00000556718 CNGA1P29973 690 aa5.99□□□□□ -1.45
PRPF39-210ENST00000556718 MCM7P33993 719 aa5.99□□□□□ -1.45
PRPF39-210ENST00000556718 DBPQ10586 325 aaPredicted RBP5.99□□□□□ -1.45
PRPF39-210ENST00000556718 KIZQ2M2Z5 673 aa5.99□□□□□ -1.45
PRPF39-210ENST00000556718 DALRD3Q5D0E6 543 aaKnown RBP5.99□□□□□ -1.45
PRPF39-210ENST00000556718 FNDC7Q5VTL7 733 aa5.99□□□□□ -1.45
PRPF39-210ENST00000556718 NIM1KQ8IY84 436 aa5.99□□□□□ -1.45
PRPF39-210ENST00000556718 CACTINQ8WUQ7 758 aaKnown RBP5.99□□□□□ -1.45
PRPF39-210ENST00000556718 DCAF4Q8WV16 495 aa5.99□□□□□ -1.45
PRPF39-210ENST00000556718 PLEKHG4BQ96PX9 1271 aa5.99□□□□□ -1.45
PRPF39-210ENST00000556718 DHRS4Q9BTZ2 278 aa5.99□□□□□ -1.45
PRPF39-210ENST00000556718 IPPKQ9H8X2 491 aa5.99□□□□□ -1.45
PRPF39-210ENST00000556718 CUTAO60888 179 aa5.98□□□□□ -1.45
PRPF39-210ENST00000556718 CT47A1Q5JQC4 288 aaPredicted RBP5.98□□□□□ -1.45
PRPF39-210ENST00000556718 LARP4Q71RC2 724 aaKnown RBP eCLIP5.98□□□□□ -1.45
PRPF39-210ENST00000556718 ZNF575Q86XF7 245 aa5.98□□□□□ -1.45
PRPF39-210ENST00000556718 SCUBE1Q8IWY4 988 aa5.98□□□□□ -1.45
PRPF39-210ENST00000556718 CHAC2Q8WUX2 184 aa5.98□□□□□ -1.45
PRPF39-210ENST00000556718 CFHR4Q92496 578 aa5.98□□□□□ -1.45
PRPF39-210ENST00000556718 NINJ1Q92982 152 aa5.98□□□□□ -1.45
PRPF39-210ENST00000556718 C12orf65Q9H3J6 166 aaKnown RBP5.98□□□□□ -1.45
PRPF39-210ENST00000556718 NR2E1Q9Y466 385 aa5.98□□□□□ -1.45
PRPF39-210ENST00000556718 NUB1Q9Y5A7 615 aa5.98□□□□□ -1.45
PRPF39-210ENST00000556718 TRBV23-1A0A0A0MS06 115 aa5.97□□□□□ -1.45
PRPF39-210ENST00000556718 PLD2O14939 933 aa5.97□□□□□ -1.45
PRPF39-210ENST00000556718 PRODHO43272 600 aa5.97□□□□□ -1.45
PRPF39-210ENST00000556718 RFPL3O75679 317 aa5.97□□□□□ -1.45
PRPF39-210ENST00000556718 APPP05067 770 aa5.97□□□□□ -1.45
PRPF39-210ENST00000556718 SUMO1P63165 101 aaKnown RBP5.97□□□□□ -1.45
PRPF39-210ENST00000556718 ZMAT1Q5H9K5 638 aa5.97□□□□□ -1.45
PRPF39-210ENST00000556718 OSBP2Q969R2 916 aa5.97□□□□□ -1.45
PRPF39-210ENST00000556718 KIAA1683Q9H0B3 1180 aa5.97□□□□□ -1.45
PRPF39-210ENST00000556718 NCOA5Q9HCD5 579 aaKnown RBP5.97□□□□□ -1.45
PRPF39-210ENST00000556718 ARHGEF4Q9NR80 690 aa5.97□□□□□ -1.45
PRPF39-210ENST00000556718 MRPS23Q9Y3D9 190 aaKnown RBP5.97□□□□□ -1.45
PRPF39-210ENST00000556718 ASXL2Q76L83 1435 aa5.97□□□□□ -1.45
PRPF39-210ENST00000556718 A0A087X1B8 175 aa5.96□□□□□ -1.46
PRPF39-210ENST00000556718 FAM90A27PA6NNH2 459 aa5.96□□□□□ -1.46
PRPF39-210ENST00000556718 VIL1P09327 827 aaKnown RBP5.96□□□□□ -1.46
PRPF39-210ENST00000556718 MYCLP1P12525 358 aaPredicted RBP5.96□□□□□ -1.46
PRPF39-210ENST00000556718 ACRV1P26436 265 aa5.96□□□□□ -1.46
PRPF39-210ENST00000556718 SOX5P35711 763 aa5.96□□□□□ -1.46
PRPF39-210ENST00000556718 ETV4P43268 484 aa5.96□□□□□ -1.46
PRPF39-210ENST00000556718 GPR85P60893 370 aa5.96□□□□□ -1.46
PRPF39-210ENST00000556718 FOXL1Q12952 345 aa5.96□□□□□ -1.46
PRPF39-210ENST00000556718 PABPC4Q13310 644 aaKnown RBP eCLIP5.96□□□□□ -1.46
PRPF39-210ENST00000556718 C21orf62-AS1Q17RA5 79 aa5.96□□□□□ -1.46
PRPF39-210ENST00000556718 KRTAP15-1Q3LI76 137 aa5.96□□□□□ -1.46
PRPF39-210ENST00000556718 WDR72Q3MJ13 1102 aa5.96□□□□□ -1.46
PRPF39-210ENST00000556718 FNDC3BQ53EP0 1204 aaKnown RBP5.96□□□□□ -1.46
PRPF39-210ENST00000556718 KRT26Q7Z3Y9 468 aa5.96□□□□□ -1.46
PRPF39-210ENST00000556718 LDLRAD3Q86YD5 345 aa5.96□□□□□ -1.46
PRPF39-210ENST00000556718 DHX37Q8IY37 1157 aaKnown RBP5.96□□□□□ -1.46
PRPF39-210ENST00000556718 FAM89AQ96GI7 184 aa5.96□□□□□ -1.46
PRPF39-210ENST00000556718 MMRN2Q9H8L6 949 aa5.96□□□□□ -1.46
PRPF39-210ENST00000556718 FAM47E-STBD1D6RA91 191 aa5.95□□□□□ -1.46
PRPF39-210ENST00000556718 ARHGAP6O43182 974 aa5.95□□□□□ -1.46
PRPF39-210ENST00000556718 FGFR1P11362 822 aa5.95□□□□□ -1.46
PRPF39-210ENST00000556718 PABPC1P11940 636 aaKnown RBP5.95□□□□□ -1.46
PRPF39-210ENST00000556718 MSX2P35548 267 aaPredicted RBP5.95□□□□□ -1.46
PRPF39-210ENST00000556718 ADCY8P40145 1251 aa5.95□□□□□ -1.46
PRPF39-210ENST00000556718 KCNQ1P51787 676 aa5.95□□□□□ -1.46
PRPF39-210ENST00000556718 NANOS3P60323 173 aaKnown RBP5.95□□□□□ -1.46
PRPF39-210ENST00000556718 IL13RA1P78552 427 aa5.95□□□□□ -1.46
PRPF39-210ENST00000556718 PURAQ00577 322 aaKnown RBP5.95□□□□□ -1.46
PRPF39-210ENST00000556718 AMPD3Q01432 767 aa5.95□□□□□ -1.46
PRPF39-210ENST00000556718 NFYCQ13952 458 aa5.95□□□□□ -1.46
PRPF39-210ENST00000556718 TM4SF20Q53R12 229 aa5.95□□□□□ -1.46
PRPF39-210ENST00000556718 FAM209AQ5JX71 171 aa5.95□□□□□ -1.46
PRPF39-210ENST00000556718 BTBD8Q5XKL5 378 aa5.95□□□□□ -1.46
PRPF39-210ENST00000556718 STYK1Q6J9G0 422 aa5.95□□□□□ -1.46
PRPF39-210ENST00000556718 NSMFQ6X4W1 530 aa5.95□□□□□ -1.46
PRPF39-210ENST00000556718 IFNL3Q8IZI9 196 aa5.95□□□□□ -1.46
PRPF39-210ENST00000556718 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.95□□□□□ -1.46
PRPF39-210ENST00000556718 LARP4BQ92615 738 aaKnown RBP5.95□□□□□ -1.46
PRPF39-210ENST00000556718 ZFYVE21Q9BQ24 234 aa5.95□□□□□ -1.46
PRPF39-210ENST00000556718 MRPL4Q9BYD3 311 aaKnown RBP5.95□□□□□ -1.46
PRPF39-210ENST00000556718 ZDHHC5Q9C0B5 715 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms