RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 HSD17B14Q9BPX1 270 aa27.55■■■□□ 2
SDR39U1-221ENST00000556707 ZSWIM4Q9H7M6 989 aa27.55■■■□□ 2
SDR39U1-221ENST00000556707 MYH15Q9Y2K3 1946 aa27.55■■■□□ 2
SDR39U1-221ENST00000556707 NBNO60934 754 aa27.54■■■□□ 2
SDR39U1-221ENST00000556707 SLITRK3O94933 977 aa27.54■■■□□ 2
SDR39U1-221ENST00000556707 FGBP02675 491 aa27.54■■■□□ 2
SDR39U1-221ENST00000556707 CXCL10P02778 98 aa27.54■■■□□ 2
SDR39U1-221ENST00000556707 PRPHP41219 470 aa27.54■■■□□ 2
SDR39U1-221ENST00000556707 FXR2P51116 673 aaKnown RBP eCLIP27.54■■■□□ 2
SDR39U1-221ENST00000556707 CTTNQ14247 550 aaKnown RBP27.54■■■□□ 2
SDR39U1-221ENST00000556707 ANO5Q75V66 913 aa27.54■■■□□ 2
SDR39U1-221ENST00000556707 TMEM150BA6NC51 233 aa27.53■■■□□ 2
SDR39U1-221ENST00000556707 PDIA4P13667 645 aaKnown RBP27.53■■■□□ 2
SDR39U1-221ENST00000556707 ATP2C1P98194 919 aaPredicted RBP27.53■■■□□ 2
SDR39U1-221ENST00000556707 TPH2Q8IWU9 490 aa27.53■■■□□ 2
SDR39U1-221ENST00000556707 SPRYD3Q8NCJ5 442 aa27.53■■■□□ 2
SDR39U1-221ENST00000556707 RNPC3Q96LT9 517 aaKnown RBP27.53■■■□□ 2
SDR39U1-221ENST00000556707 FTOQ9C0B1 505 aaKnown RBP eCLIP27.53■■■□□ 2
SDR39U1-221ENST00000556707 LAMA3Q16787 3333 aa27.52■■■□□ 2
SDR39U1-221ENST00000556707 CHRNA1P02708 482 aa27.52■■■□□ 2
SDR39U1-221ENST00000556707 MTERF2Q49AM1 385 aa27.52■■■□□ 2
SDR39U1-221ENST00000556707 KIAA0319LQ8IZA0 1049 aa27.52■■■□□ 2
SDR39U1-221ENST00000556707 NME8Q8N427 588 aa27.52■■■□□ 2
SDR39U1-221ENST00000556707 HERVK_113Q902F9 699 aa27.52■■■□□ 2
SDR39U1-221ENST00000556707 CEP89Q96ST8 783 aa27.52■■■□□ 2
SDR39U1-221ENST00000556707 LAMA2P24043 3122 aaKnown RBP27.52■■■□□ 2
SDR39U1-221ENST00000556707 LYPLA2O95372 231 aa27.51■■□□□ 1.99
SDR39U1-221ENST00000556707 MRPS6P82932 125 aaKnown RBP27.51■■□□□ 1.99
SDR39U1-221ENST00000556707 MGAT3Q09327 533 aa27.51■■□□□ 1.99
SDR39U1-221ENST00000556707 TBC1D8BQ0IIM8 1120 aa27.51■■□□□ 1.99
SDR39U1-221ENST00000556707 PDIA5Q14554 519 aa27.51■■□□□ 1.99
SDR39U1-221ENST00000556707 RASIP1Q5U651 963 aa27.51■■□□□ 1.99
SDR39U1-221ENST00000556707 METTL13Q8N6R0 699 aa27.51■■□□□ 1.99
SDR39U1-221ENST00000556707 ERMNQ8TAM6 284 aa27.51■■□□□ 1.99
SDR39U1-221ENST00000556707 RAB34Q9BZG1 259 aa27.51■■□□□ 1.99
SDR39U1-221ENST00000556707 ZSCAN16Q9H4T2 348 aaPredicted RBP27.51■■□□□ 1.99
SDR39U1-221ENST00000556707 CDY2AQ9Y6F7 541 aa27.51■■□□□ 1.99
SDR39U1-221ENST00000556707 MICAL3Q7RTP6 2002 aa27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 BMP15O95972 392 aa27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 YWHABP31946 246 aaKnown RBP27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 LRIT3Q3SXY7 679 aa27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 IER5Q5VY09 327 aa27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 PLA2G4FQ68DD2 849 aa27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 EFCAB12Q6NXP0 572 aa27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 DTHD1Q6ZMT9 781 aa27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 OTUD6AQ7L8S5 288 aa27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 OTOP2Q7RTS6 562 aa27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 LINC01465Q8N7H1 131 aa27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 IGSF22Q8N9C0 903 aa27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 SH2D3AQ9BRG2 576 aa27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 POLR3CQ9BUI4 534 aaPredicted RBP27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 MTIF3Q9H2K0 278 aaKnown RBP27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 TUFT1Q9NNX1 390 aa27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 CYP26B1Q9NR63 512 aa27.5■■□□□ 1.99
SDR39U1-221ENST00000556707 SPATA31C1P0DKV0 1188 aa27.49■■□□□ 1.99
SDR39U1-221ENST00000556707 ACTN1P12814 892 aa27.49■■□□□ 1.99
SDR39U1-221ENST00000556707 NPEPPSP55786 919 aa27.49■■□□□ 1.99
SDR39U1-221ENST00000556707 BECN1Q14457 450 aa27.49■■□□□ 1.99
SDR39U1-221ENST00000556707 IL17AQ16552 155 aa27.49■■□□□ 1.99
SDR39U1-221ENST00000556707 ARL6IP4Q66PJ3 421 aaKnown RBP27.49■■□□□ 1.99
SDR39U1-221ENST00000556707 LRWD1Q9UFC0 647 aa27.49■■□□□ 1.99
SDR39U1-221ENST00000556707 PPME1Q9Y570 386 aa27.49■■□□□ 1.99
SDR39U1-221ENST00000556707 M0QZ92 97 aa27.48■■□□□ 1.99
SDR39U1-221ENST00000556707 ZBTB39O15060 712 aa27.48■■□□□ 1.99
SDR39U1-221ENST00000556707 MED24O75448 989 aa27.48■■□□□ 1.99
SDR39U1-221ENST00000556707 RPA1P27694 616 aa27.48■■□□□ 1.99
SDR39U1-221ENST00000556707 TMOD1P28289 359 aa27.48■■□□□ 1.99
SDR39U1-221ENST00000556707 CLCN3P51790 818 aa27.48■■□□□ 1.99
SDR39U1-221ENST00000556707 CNKSR3Q6P9H4 555 aa27.48■■□□□ 1.99
SDR39U1-221ENST00000556707 CATSPER3Q86XQ3 398 aa27.48■■□□□ 1.99
SDR39U1-221ENST00000556707 CEP170P1Q96L14 293 aa27.48■■□□□ 1.99
SDR39U1-221ENST00000556707 OSBPL7Q9BZF2 842 aa27.48■■□□□ 1.99
SDR39U1-221ENST00000556707 SUGCTQ9HAC7 445 aa27.48■■□□□ 1.99
SDR39U1-221ENST00000556707 TRPV2Q9Y5S1 764 aa27.48■■□□□ 1.99
SDR39U1-221ENST00000556707 KDM3AQ9Y4C1 1321 aa27.47■■□□□ 1.99
SDR39U1-221ENST00000556707 IGKV6-21A0A0C4DH24 114 aa27.47■■□□□ 1.99
SDR39U1-221ENST00000556707 TMEM62Q0P6H9 643 aa27.47■■□□□ 1.99
SDR39U1-221ENST00000556707 SF3A1Q15459 793 aaKnown RBP27.47■■□□□ 1.99
SDR39U1-221ENST00000556707 PLEKHG4Q58EX7 1191 aa27.47■■□□□ 1.99
SDR39U1-221ENST00000556707 HAUS3Q68CZ6 603 aa27.47■■□□□ 1.99
SDR39U1-221ENST00000556707 FAM173BQ6P4H8 233 aa27.47■■□□□ 1.99
SDR39U1-221ENST00000556707 LRRC71Q8N4P6 559 aa27.47■■□□□ 1.99
SDR39U1-221ENST00000556707 CELF4Q9BZC1 486 aaKnown RBP27.47■■□□□ 1.99
SDR39U1-221ENST00000556707 ANKEF1Q9NU02 776 aa27.47■■□□□ 1.99
SDR39U1-221ENST00000556707 CXXC1Q9P0U4 656 aaPredicted RBP27.47■■□□□ 1.99
SDR39U1-221ENST00000556707 STK24Q9Y6E0 443 aa27.47■■□□□ 1.99
SDR39U1-221ENST00000556707 MAFO75444 373 aaPredicted RBP27.46■■□□□ 1.99
SDR39U1-221ENST00000556707 XKR9Q5GH70 373 aa27.46■■□□□ 1.99
SDR39U1-221ENST00000556707 ZNF579Q8NAF0 562 aaKnown RBP27.46■■□□□ 1.99
SDR39U1-221ENST00000556707 MAP7D2Q96T17 732 aa27.46■■□□□ 1.99
SDR39U1-221ENST00000556707 JPH2Q9BR39 696 aaPredicted RBP27.46■■□□□ 1.99
SDR39U1-221ENST00000556707 BAIAP3O94812 1187 aa27.45■■□□□ 1.98
SDR39U1-221ENST00000556707 GHRP10912 638 aa27.45■■□□□ 1.98
SDR39U1-221ENST00000556707 XRCC6P12956 609 aaKnown RBP eCLIP27.45■■□□□ 1.98
SDR39U1-221ENST00000556707 MUTP22033 750 aa27.45■■□□□ 1.98
SDR39U1-221ENST00000556707 FBXO47Q5MNV8 452 aa27.45■■□□□ 1.98
SDR39U1-221ENST00000556707 EXOC8Q8IYI6 725 aa27.45■■□□□ 1.98
SDR39U1-221ENST00000556707 DBF4BQ8NFT6 615 aa27.45■■□□□ 1.98
SDR39U1-221ENST00000556707 AKT3Q9Y243 479 aa27.45■■□□□ 1.98
SDR39U1-221ENST00000556707 CLIC4Q9Y696 253 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms