RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 NPHP1O15259 732 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 PPP1R11O60927 126 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-243ENST00000556671 RPS6KA4O75676 772 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 PLA2G1BP04054 148 aaKnown RBP6.02□□□□□ -1.45
ATXN3-243ENST00000556671 ASGR2P07307 311 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 NCAM1P13591 858 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 PAMP19021 973 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 HTRA3P83110 453 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 VHLLQ6RSH7 139 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 CABP7Q86V35 215 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 CPNE8Q86YQ8 564 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 LZTR1Q8N653 840 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 NETO2Q8NC67 525 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 PNISRQ8TF01 805 aaKnown RBP6.02□□□□□ -1.45
ATXN3-243ENST00000556671 FNIP1Q8TF40 1166 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 CPLX3Q8WVH0 158 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 MTA3Q9BTC8 594 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 TEX13AQ9BXU3 409 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-243ENST00000556671 TGIF2Q9GZN2 237 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 MTFR1LQ9H019 292 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 APEX2Q9UBZ4 518 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 STRIP2Q9ULQ0 834 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 USP16Q9Y5T5 823 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 KDM3BQ7LBC6 1761 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 PAPPAQ13219 1627 aa6.01□□□□□ -1.45
ATXN3-243ENST00000556671 PRAMEF22A3QJZ6 481 aa6.01□□□□□ -1.45
ATXN3-243ENST00000556671 ELL2O00472 640 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-243ENST00000556671 SNRPA1P09661 255 aaKnown RBP6.01□□□□□ -1.45
ATXN3-243ENST00000556671 CYP19A1P11511 503 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-243ENST00000556671 MYL6BP14649 208 aa6.01□□□□□ -1.45
ATXN3-243ENST00000556671 ZDHHC14Q8IZN3 488 aa6.01□□□□□ -1.45
ATXN3-243ENST00000556671 ALG3Q92685 438 aa6.01□□□□□ -1.45
ATXN3-243ENST00000556671 ACBD3Q9H3P7 528 aa6.01□□□□□ -1.45
ATXN3-243ENST00000556671 RXFP1Q9HBX9 757 aa6.01□□□□□ -1.45
ATXN3-243ENST00000556671 SRP68Q9UHB9 627 aaKnown RBP6.01□□□□□ -1.45
ATXN3-243ENST00000556671 AKT3Q9Y243 479 aa6.01□□□□□ -1.45
ATXN3-243ENST00000556671 FAN1Q9Y2M0 1017 aa6.01□□□□□ -1.45
ATXN3-243ENST00000556671 C4AP0C0L4 1744 aa6.01□□□□□ -1.45
ATXN3-243ENST00000556671 ZNF831Q5JPB2 1677 aa6.01□□□□□ -1.45
ATXN3-243ENST00000556671 ADAMTS7Q9UKP4 1686 aa6.01□□□□□ -1.45
ATXN3-243ENST00000556671 NPHP3-ACAD11A0A0J9YXS1 232 aa6□□□□□ -1.45
ATXN3-243ENST00000556671 UNCXA6NJT0 531 aa6□□□□□ -1.45
ATXN3-243ENST00000556671 MC3RP41968 323 aa6□□□□□ -1.45
ATXN3-243ENST00000556671 ZNF143P52747 638 aaPredicted RBP6□□□□□ -1.45
ATXN3-243ENST00000556671 SLURP1P55000 103 aa6□□□□□ -1.45
ATXN3-243ENST00000556671 AIMP1Q12904 312 aaKnown RBP6□□□□□ -1.45
ATXN3-243ENST00000556671 B3GNT8Q7Z7M8 397 aa6□□□□□ -1.45
ATXN3-243ENST00000556671 SAPCD2Q86UD0 394 aa6□□□□□ -1.45
ATXN3-243ENST00000556671 COPS5Q92905 334 aa6□□□□□ -1.45
ATXN3-243ENST00000556671 PEX11GQ96HA9 241 aa6□□□□□ -1.45
ATXN3-243ENST00000556671 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6□□□□□ -1.45
ATXN3-243ENST00000556671 GULP1Q9UBP9 304 aa6□□□□□ -1.45
ATXN3-243ENST00000556671 NUDT5Q9UKK9 219 aa6□□□□□ -1.45
ATXN3-243ENST00000556671 EMC9Q9Y3B6 208 aa6□□□□□ -1.45
ATXN3-243ENST00000556671 PMF1-BGLAPU3KQ54 211 aa6□□□□□ -1.45
ATXN3-243ENST00000556671 PLEKHG2Q9H7P9 1386 aa6□□□□□ -1.45
ATXN3-243ENST00000556671 HEG1Q9ULI3 1381 aa6□□□□□ -1.45
ATXN3-243ENST00000556671 LAMB4A4D0S4 1761 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 C7orf72A4D263 438 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 SH3D21A4FU49 640 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 PMLP29590 882 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 KCNC1P48547 511 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 EIF4A1P60842 406 aaKnown RBP5.99□□□□□ -1.45
ATXN3-243ENST00000556671 GNAI1P63096 354 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 RBM10P98175 930 aaKnown RBP5.99□□□□□ -1.45
ATXN3-243ENST00000556671 CALD1Q05682 793 aaKnown RBP5.99□□□□□ -1.45
ATXN3-243ENST00000556671 DLX2Q07687 328 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-243ENST00000556671 SLC9A5Q14940 896 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 GPR162Q16538 588 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 LIPIQ6XZB0 460 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 FRMD5Q7Z6J6 570 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 CRACR2BQ8N4Y2 399 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-243ENST00000556671 BVESQ8NE79 360 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 TEPSINQ96N21 525 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 MMP19Q99542 508 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 APBA2Q99767 749 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 ADAM7Q9H2U9 754 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 BCAS3Q9H6U6 928 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 INPP5FQ9Y2H2 1132 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 ZBTB1Q9Y2K1 713 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 LRP5O75197 1615 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 KCPQ6ZWJ8 1503 aa5.99□□□□□ -1.45
ATXN3-243ENST00000556671 CEMIPQ8WUJ3 1361 aa5.98□□□□□ -1.45
ATXN3-243ENST00000556671 TCERG1O14776 1098 aaKnown RBP5.98□□□□□ -1.45
ATXN3-243ENST00000556671 NPHS1O60500 1241 aa5.98□□□□□ -1.45
ATXN3-243ENST00000556671 KCNH1O95259 989 aa5.98□□□□□ -1.45
ATXN3-243ENST00000556671 ANXA1P04083 346 aa5.98□□□□□ -1.45
ATXN3-243ENST00000556671 MMP10P09238 476 aa5.98□□□□□ -1.45
ATXN3-243ENST00000556671 NAT2P11245 290 aa5.98□□□□□ -1.45
ATXN3-243ENST00000556671 SCRN1Q12765 414 aa5.98□□□□□ -1.45
ATXN3-243ENST00000556671 KRT24Q2M2I5 525 aa5.98□□□□□ -1.45
ATXN3-243ENST00000556671 SKOR2Q2VWA4 1001 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-243ENST00000556671 WWC2Q6AWC2 1192 aa5.98□□□□□ -1.45
ATXN3-243ENST00000556671 POMZP3Q6PJE2 187 aa5.98□□□□□ -1.45
ATXN3-243ENST00000556671 CPA5Q8WXQ8 436 aa5.98□□□□□ -1.45
ATXN3-243ENST00000556671 ZNF428Q96B54 188 aa5.98□□□□□ -1.45
ATXN3-243ENST00000556671 ANAPC16Q96DE5 110 aa5.98□□□□□ -1.45
ATXN3-243ENST00000556671 SYT17Q9BSW7 474 aa5.98□□□□□ -1.45
ATXN3-243ENST00000556671 CLEC1BQ9P126 229 aa5.98□□□□□ -1.45
ATXN3-243ENST00000556671 MRC1P22897 1456 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms