RNA–Protein interactions for RNA: ENST00000556647.1

SRSF5-216, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-216ENST00000556647 CD52P31358 61 aa11.3□□□□□ -0.6
SRSF5-216ENST00000556647 CA8P35219 290 aa11.3□□□□□ -0.6
SRSF5-216ENST00000556647 MGAT3Q09327 533 aa11.3□□□□□ -0.6
SRSF5-216ENST00000556647 FBXO47Q5MNV8 452 aa11.3□□□□□ -0.6
SRSF5-216ENST00000556647 KIAA1841Q6NSI8 718 aa11.3□□□□□ -0.6
SRSF5-216ENST00000556647 POTEGQ6S5H5 508 aa11.3□□□□□ -0.6
SRSF5-216ENST00000556647 TSHZ1Q6ZSZ6 1077 aa11.3□□□□□ -0.6
SRSF5-216ENST00000556647 CLASRPQ8N2M8 674 aaKnown RBP11.3□□□□□ -0.6
SRSF5-216ENST00000556647 COLGALT1Q8NBJ5 622 aa11.3□□□□□ -0.6
SRSF5-216ENST00000556647 RGS22Q8NE09 1264 aa11.3□□□□□ -0.6
SRSF5-216ENST00000556647 RHPN1Q8TCX5 695 aa11.3□□□□□ -0.6
SRSF5-216ENST00000556647 ATRIPQ8WXE1 791 aa11.3□□□□□ -0.6
SRSF5-216ENST00000556647 MRPS27Q92552 414 aaKnown RBP11.3□□□□□ -0.6
SRSF5-216ENST00000556647 FRAT1Q92837 279 aaPredicted RBP11.3□□□□□ -0.6
SRSF5-216ENST00000556647 AGO3Q9H9G7 860 aaKnown RBP11.3□□□□□ -0.6
SRSF5-216ENST00000556647 NGRNQ9NPE2 291 aaKnown RBP11.3□□□□□ -0.6
SRSF5-216ENST00000556647 IL17RBQ9NRM6 502 aa11.3□□□□□ -0.6
SRSF5-216ENST00000556647 KIAA1468Q9P260 1216 aa11.3□□□□□ -0.6
SRSF5-216ENST00000556647 HCSTQ9UBK5 93 aa11.3□□□□□ -0.6
SRSF5-216ENST00000556647 WNT16Q9UBV4 365 aa11.3□□□□□ -0.6
SRSF5-216ENST00000556647 KAT6AQ92794 2004 aa11.3□□□□□ -0.6
SRSF5-216ENST00000556647 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.29□□□□□ -0.6
SRSF5-216ENST00000556647 TBKBP1A7MCY6 615 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 SMAPO00193 183 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 SPTLC1O15269 473 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 PROS1P07225 676 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 SLC3A2P08195 630 aaKnown RBP11.29□□□□□ -0.6
SRSF5-216ENST00000556647 NR3C2P08235 984 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 MYCLP12524 364 aaPredicted RBP11.29□□□□□ -0.6
SRSF5-216ENST00000556647 SCG2P13521 617 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 TGM1P22735 817 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 TMEM259Q4ZIN3 620 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 TMC7Q7Z402 723 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 RSPH3Q86UC2 560 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 TMEM57Q8N5G2 664 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 RDH13Q8NBN7 331 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 LMBR1Q8WVP7 490 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 SLC4A5Q9BY07 1137 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 PARD6AQ9NPB6 346 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 DLGAP2Q9P1A6 1054 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 ZMIZ1Q9ULJ6 1067 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 SMG5Q9UPR3 1016 aaKnown RBP11.29□□□□□ -0.6
SRSF5-216ENST00000556647 CDY2AQ9Y6F7 541 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.29□□□□□ -0.6
SRSF5-216ENST00000556647 WDR19Q8NEZ3 1342 aa11.29□□□□□ -0.6
SRSF5-216ENST00000556647 NOP56O00567 594 aaKnown RBP11.28□□□□□ -0.6
SRSF5-216ENST00000556647 ARHGAP33O14559 1287 aa11.28□□□□□ -0.6
SRSF5-216ENST00000556647 SLC30A4O14863 429 aa11.28□□□□□ -0.6
SRSF5-216ENST00000556647 ADAM17P78536 824 aa11.28□□□□□ -0.6
SRSF5-216ENST00000556647 SP2Q02086 613 aa11.28□□□□□ -0.6
SRSF5-216ENST00000556647 OTOP3Q7RTS5 596 aa11.28□□□□□ -0.6
SRSF5-216ENST00000556647 MAML2Q8IZL2 1156 aaPredicted RBP11.28□□□□□ -0.6
SRSF5-216ENST00000556647 NETO1Q8TDF5 533 aa11.28□□□□□ -0.6
SRSF5-216ENST00000556647 FTHL17Q9BXU8 183 aa11.28□□□□□ -0.6
SRSF5-216ENST00000556647 TYW1Q9NV66 732 aaKnown RBP11.28□□□□□ -0.6
SRSF5-216ENST00000556647 RABGEF1Q9UJ41 708 aa11.28□□□□□ -0.6
SRSF5-216ENST00000556647 LZTS1Q9Y250 596 aa11.28□□□□□ -0.6
SRSF5-216ENST00000556647 PCDHB7Q9Y5E2 793 aa11.28□□□□□ -0.6
SRSF5-216ENST00000556647 CLASP2O75122 1294 aaKnown RBP11.27□□□□□ -0.61
SRSF5-216ENST00000556647 GLULP15104 373 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 UBA1P22314 1058 aaKnown RBP11.27□□□□□ -0.61
SRSF5-216ENST00000556647 PMLP29590 882 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 RFC5P40937 340 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 CSTF1Q05048 431 aaKnown RBP11.27□□□□□ -0.61
SRSF5-216ENST00000556647 SPEM2Q0P670 501 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 UTP14CQ5TAP6 766 aaKnown RBP11.27□□□□□ -0.61
SRSF5-216ENST00000556647 KCNV1Q6PIU1 500 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 TRIM50Q86XT4 487 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 IFNL3Q8IZI9 196 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 FEZF2Q8TBJ5 459 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 DNAJB3Q8WWF6 145 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 RSAD2Q8WXG1 361 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 OSBP2Q969R2 916 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 BORCS6Q96GS4 357 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 GPR20Q99678 358 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 USP26Q9BXU7 913 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 BCAS3Q9H6U6 928 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 PXMP2Q9NR77 195 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 IGSF9Q9P2J2 1179 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 GMEB2Q9UKD1 530 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 CCDC171Q6TFL3 1326 aa11.27□□□□□ -0.61
SRSF5-216ENST00000556647 FNDC1Q4ZHG4 1894 aaPredicted RBP11.26□□□□□ -0.61
SRSF5-216ENST00000556647 GPAA1O43292 621 aa11.26□□□□□ -0.61
SRSF5-216ENST00000556647 LAMTOR5O43504 91 aa11.26□□□□□ -0.61
SRSF5-216ENST00000556647 LRRN2O75325 713 aa11.26□□□□□ -0.61
SRSF5-216ENST00000556647 ATP5JP18859 108 aa11.26□□□□□ -0.61
SRSF5-216ENST00000556647 USP46P62068 366 aa11.26□□□□□ -0.61
SRSF5-216ENST00000556647 PLCB3Q01970 1234 aa11.26□□□□□ -0.61
SRSF5-216ENST00000556647 KRT17Q04695 432 aa11.26□□□□□ -0.61
SRSF5-216ENST00000556647 SMC1AQ14683 1233 aaKnown RBP11.26□□□□□ -0.61
SRSF5-216ENST00000556647 ZNF528Q3MIS6 628 aa11.26□□□□□ -0.61
SRSF5-216ENST00000556647 FAM102BQ5T8I3 360 aa11.26□□□□□ -0.61
SRSF5-216ENST00000556647 N4BP2L1Q5TBK1 243 aaPredicted RBP11.26□□□□□ -0.61
SRSF5-216ENST00000556647 PHLDB3Q6NSJ2 640 aa11.26□□□□□ -0.61
SRSF5-216ENST00000556647 TAF2Q6P1X5 1199 aa11.26□□□□□ -0.61
SRSF5-216ENST00000556647 TMC5Q6UXY8 1006 aa11.26□□□□□ -0.61
SRSF5-216ENST00000556647 CCDC149Q6ZUS6 474 aa11.26□□□□□ -0.61
SRSF5-216ENST00000556647 TMEM87AQ8NBN3 555 aa11.26□□□□□ -0.61
SRSF5-216ENST00000556647 GPKOWQ92917 476 aaPredicted RBP eCLIP11.26□□□□□ -0.612e-12■■□□□ 12.5
SRSF5-216ENST00000556647 FOXQ1Q9C009 403 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms