RNA–Protein interactions for RNA: ENST00000556641.5

CCNK-207, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 747 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-207ENST00000556641 ZNF618Q5T7W0 954 aa11.28□□□□□ -0.6
CCNK-207ENST00000556641 TAF2Q6P1X5 1199 aa11.28□□□□□ -0.6
CCNK-207ENST00000556641 ZNF365Q70YC5 407 aa11.28□□□□□ -0.6
CCNK-207ENST00000556641 HSCBQ8IWL3 235 aa11.28□□□□□ -0.6
CCNK-207ENST00000556641 TRAPPC12Q8WVT3 735 aa11.28□□□□□ -0.6
CCNK-207ENST00000556641 BBXQ8WY36 941 aaPredicted RBP11.28□□□□□ -0.6
CCNK-207ENST00000556641 HAS1Q92839 578 aa11.28□□□□□ -0.6
CCNK-207ENST00000556641 WNT8BQ93098 351 aa11.28□□□□□ -0.6
CCNK-207ENST00000556641 FAM167AQ96KS9 214 aa11.28□□□□□ -0.6
CCNK-207ENST00000556641 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCNK-207ENST00000556641 NRBP2Q9NSY0 501 aa11.28□□□□□ -0.6
CCNK-207ENST00000556641 PCDHA12Q9UN75 941 aa11.28□□□□□ -0.6
CCNK-207ENST00000556641 TRIP12Q14669 1992 aaPredicted RBP11.28□□□□□ -0.6
CCNK-207ENST00000556641 ZBBXA8MT70 800 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 KIF28PB7ZC32 967 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 CAND2O75155 1236 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 PPP1R37O75864 691 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 HSP90AA1P07900 732 aaKnown RBP11.27□□□□□ -0.61
CCNK-207ENST00000556641 CTSHP09668 335 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 ACTN1P12814 892 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 PDCP20941 246 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 U2AF2P26368 475 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCNK-207ENST00000556641 KLRC1P26715 233 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 TRAPPC10P48553 1259 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 ADAM17P78536 824 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 PRKCEQ02156 737 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 RBL2Q08999 1139 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 PPP2R5CQ13362 524 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 TRIM71Q2Q1W2 868 aaKnown RBP11.27□□□□□ -0.61
CCNK-207ENST00000556641 ZNF484Q5JVG2 852 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 TTC38Q5R3I4 469 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 NCAPH2Q6IBW4 605 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 RUFY4Q6ZNE9 571 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 C16orf59Q7L2K0 433 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 OTOP2Q7RTS6 562 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 FAM49AQ9H0Q0 323 aaPredicted RBP11.27□□□□□ -0.61
CCNK-207ENST00000556641 VAV3Q9UKW4 847 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 CEP131Q9UPN4 1083 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 LAMA3Q16787 3333 aa11.27□□□□□ -0.61
CCNK-207ENST00000556641 MBLAC1A4D2B0 266 aaPredicted RBP11.26□□□□□ -0.61
CCNK-207ENST00000556641 DDX11L8A8MPP1 907 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 M0QZ92 97 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 EML1O00423 815 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 WNT7AO00755 349 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 DKC1O60832 514 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCNK-207ENST00000556641 OATP04181 439 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 RPLP2P05387 115 aaKnown RBP11.26□□□□□ -0.61
CCNK-207ENST00000556641 ATP4AP20648 1035 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 PSMC5P62195 406 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 ORC2Q13416 577 aaPredicted RBP11.26□□□□□ -0.61
CCNK-207ENST00000556641 UGCGQ16739 394 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 LRIT3Q3SXY7 679 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 MARCH8Q5T0T0 291 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 MTHFD1LQ6UB35 978 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 METTL13Q8N6R0 699 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 BANK1Q8NDB2 785 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 DNAJB3Q8WWF6 145 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 SNX21Q969T3 373 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 ZBTB10Q96DT7 871 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 TTC12Q9H892 705 aaPredicted RBP11.26□□□□□ -0.61
CCNK-207ENST00000556641 SEPT9Q9UHD8 586 aaPredicted RBP11.26□□□□□ -0.61
CCNK-207ENST00000556641 PCDHA2Q9Y5H9 948 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 IGSF9BQ9UPX0 1349 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 COL1A2P08123 1366 aa11.26□□□□□ -0.61
CCNK-207ENST00000556641 MYH9P35579 1960 aaKnown RBP11.25□□□□□ -0.61
CCNK-207ENST00000556641 VPS37CA5D8V6 355 aaPredicted RBP11.25□□□□□ -0.61
CCNK-207ENST00000556641 ZNF862O60290 1169 aa11.25□□□□□ -0.61
CCNK-207ENST00000556641 P4HBP07237 508 aaKnown RBP11.25□□□□□ -0.61
CCNK-207ENST00000556641 OR52Z1P0C646 297 aa11.25□□□□□ -0.61
CCNK-207ENST00000556641 QARSP47897 775 aaKnown RBP11.25□□□□□ -0.61
CCNK-207ENST00000556641 FXR1P51114 621 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCNK-207ENST00000556641 EPHA7Q15375 998 aa11.25□□□□□ -0.61
CCNK-207ENST00000556641 XKR3Q5GH77 459 aa11.25□□□□□ -0.61
CCNK-207ENST00000556641 IER5Q5VY09 327 aa11.25□□□□□ -0.61
CCNK-207ENST00000556641 B3GNT9Q6UX72 402 aa11.25□□□□□ -0.61
CCNK-207ENST00000556641 PLPP6Q8IY26 295 aa11.25□□□□□ -0.61
CCNK-207ENST00000556641 HERVK_113Q902F9 699 aa11.25□□□□□ -0.61
CCNK-207ENST00000556641 INTS4Q96HW7 963 aaKnown RBP11.25□□□□□ -0.61
CCNK-207ENST00000556641 MTMR9Q96QG7 549 aa11.25□□□□□ -0.61
CCNK-207ENST00000556641 TMEM60Q9H2L4 133 aa11.25□□□□□ -0.61
CCNK-207ENST00000556641 SLC4A7Q9Y6M7 1214 aa11.25□□□□□ -0.61
CCNK-207ENST00000556641 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.24□□□□□ -0.61
CCNK-207ENST00000556641 SMIM35A0A1B0GVV1 85 aa11.24□□□□□ -0.61
CCNK-207ENST00000556641 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.24□□□□□ -0.61
CCNK-207ENST00000556641 SOX1O00570 391 aaPredicted RBP11.24□□□□□ -0.61
CCNK-207ENST00000556641 MAGEB2O15479 319 aa11.24□□□□□ -0.61
CCNK-207ENST00000556641 NBNO60934 754 aa11.24□□□□□ -0.61
CCNK-207ENST00000556641 TMOD1P28289 359 aa11.24□□□□□ -0.61
CCNK-207ENST00000556641 KCNJ6P48051 423 aa11.24□□□□□ -0.61
CCNK-207ENST00000556641 MRPS6P82932 125 aaKnown RBP11.24□□□□□ -0.61
CCNK-207ENST00000556641 CYP4A11Q02928 519 aa11.24□□□□□ -0.61
CCNK-207ENST00000556641 TBC1D8BQ0IIM8 1120 aa11.24□□□□□ -0.61
CCNK-207ENST00000556641 TMEM62Q0P6H9 643 aa11.24□□□□□ -0.61
CCNK-207ENST00000556641 NBR1Q14596 966 aa11.24□□□□□ -0.61
CCNK-207ENST00000556641 TMEM266Q2M3C6 531 aa11.24□□□□□ -0.61
CCNK-207ENST00000556641 MTERF2Q49AM1 385 aa11.24□□□□□ -0.61
CCNK-207ENST00000556641 RILPL1Q5EBL4 403 aa11.24□□□□□ -0.61
CCNK-207ENST00000556641 DMRTA1Q5VZB9 504 aa11.24□□□□□ -0.61
CCNK-207ENST00000556641 TRAF7Q6Q0C0 670 aa11.24□□□□□ -0.61
CCNK-207ENST00000556641 RPAINQ86UA6 219 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms