RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 APBA1Q02410 837 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 KCNMA1Q12791 1236 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 MAPK7Q13164 816 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 BMT2Q1RMZ1 405 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 XRRA1Q6P2D8 792 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 ZNF720Q7Z2F6 126 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 TRIM59Q8IWR1 403 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 OPTNQ96CV9 577 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 GPRASP2Q96D09 838 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 ASCC2Q9H1I8 757 aaPredicted RBP20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 ODF2LQ9ULJ1 636 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 AKAP3O75969 853 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 ABL1P00519 1130 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 KCNA2P16389 499 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 GUCY2CP25092 1073 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 JAK3P52333 1124 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 ZNF131P52739 623 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 ZBED6P86452 979 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 ZC3H3Q8IXZ2 948 aaKnown RBP20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 RETREG2Q8NC44 543 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 ZNF408Q9H9D4 720 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 KCND2Q9NZV8 630 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 ZMYM2Q9UBW7 1377 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 GLTPD2A6NH11 291 aa20.15■□□□□ 0.82
SDR39U1-220ENST00000556548 PSMC5P62195 406 aa20.15■□□□□ 0.82
SDR39U1-220ENST00000556548 CHST13Q8NET6 341 aa20.15■□□□□ 0.82
SDR39U1-220ENST00000556548 WDR24Q96S15 920 aa20.15■□□□□ 0.82
SDR39U1-220ENST00000556548 TAF1DQ9H5J8 278 aaPredicted RBP20.15■□□□□ 0.82
SDR39U1-220ENST00000556548 GPRC5CQ9NQ84 441 aa20.15■□□□□ 0.82
SDR39U1-220ENST00000556548 CLEC11AQ9Y240 323 aa20.15■□□□□ 0.82
SDR39U1-220ENST00000556548 PCDHB13Q9Y5F0 798 aa20.15■□□□□ 0.82
SDR39U1-220ENST00000556548 SPDYE5A6NIY4 337 aa20.15■□□□□ 0.82
SDR39U1-220ENST00000556548 POTEJP0CG39 1038 aa20.15■□□□□ 0.82
SDR39U1-220ENST00000556548 XKR9Q5GH70 373 aa20.15■□□□□ 0.82
SDR39U1-220ENST00000556548 ZNF397Q8NF99 534 aaPredicted RBP20.15■□□□□ 0.82
SDR39U1-220ENST00000556548 ZC3H15Q8WU90 426 aaKnown RBP20.15■□□□□ 0.82
SDR39U1-220ENST00000556548 MOV10L1Q9BXT6 1211 aaKnown RBP20.15■□□□□ 0.82
SDR39U1-220ENST00000556548 SPATC1LQ9H0A9 340 aa20.15■□□□□ 0.82
SDR39U1-220ENST00000556548 GABBR1Q9UBS5 961 aa20.15■□□□□ 0.82
SDR39U1-220ENST00000556548 GOLGA6L9A6NEM1 432 aa20.14■□□□□ 0.82
SDR39U1-220ENST00000556548 SFNP31947 248 aa20.14■□□□□ 0.82
SDR39U1-220ENST00000556548 SP2Q02086 613 aa20.14■□□□□ 0.82
SDR39U1-220ENST00000556548 DCAF17Q5H9S7 520 aaPredicted RBP20.14■□□□□ 0.82
SDR39U1-220ENST00000556548 CCDC94Q9BW85 323 aaPredicted RBP20.14■□□□□ 0.82
SDR39U1-220ENST00000556548 PRDM10Q9NQV6 1147 aa20.14■□□□□ 0.82
SDR39U1-220ENST00000556548 ZNHIT6Q9NWK9 470 aaKnown RBP20.14■□□□□ 0.82
SDR39U1-220ENST00000556548 ARMCX3Q9UH62 379 aaPredicted RBP20.14■□□□□ 0.82
SDR39U1-220ENST00000556548 DBR1Q9UK59 544 aaKnown RBP20.14■□□□□ 0.82
SDR39U1-220ENST00000556548 PCDHA10Q9Y5I2 948 aa20.14■□□□□ 0.82
SDR39U1-220ENST00000556548 EPN1Q9Y6I3 576 aaPredicted RBP20.14■□□□□ 0.82
SDR39U1-220ENST00000556548 EIF3DO15371 548 aaKnown RBP eCLIP20.14■□□□□ 0.81
SDR39U1-220ENST00000556548 NDUFA10O95299 355 aa20.14■□□□□ 0.81
SDR39U1-220ENST00000556548 PTPRFP10586 1907 aa20.14■□□□□ 0.81
SDR39U1-220ENST00000556548 GTF2F1P35269 517 aaKnown RBP eCLIP20.14■□□□□ 0.813e-6■■□□□ 14.2
SDR39U1-220ENST00000556548 MARSP56192 900 aaKnown RBP20.14■□□□□ 0.81
SDR39U1-220ENST00000556548 HERVK_113P62684 666 aa20.14■□□□□ 0.81
SDR39U1-220ENST00000556548 KCNH2Q12809 1159 aa20.14■□□□□ 0.81
SDR39U1-220ENST00000556548 SWSAP1Q6NVH7 229 aa20.14■□□□□ 0.81
SDR39U1-220ENST00000556548 SEPT14Q6ZU15 432 aa20.14■□□□□ 0.81
SDR39U1-220ENST00000556548 RRAGAQ7L523 313 aa20.14■□□□□ 0.81
SDR39U1-220ENST00000556548 C4orf19Q8IY42 314 aa20.14■□□□□ 0.81
SDR39U1-220ENST00000556548 PROCA1Q8NCQ7 364 aaPredicted RBP20.14■□□□□ 0.81
SDR39U1-220ENST00000556548 NEK11Q8NG66 645 aa20.14■□□□□ 0.81
SDR39U1-220ENST00000556548 SEL1LQ9UBV2 794 aa20.14■□□□□ 0.81
SDR39U1-220ENST00000556548 TFR2Q9UP52 801 aa20.14■□□□□ 0.81
SDR39U1-220ENST00000556548 K7ENM7 598 aa20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 FIGNQ5HY92 759 aa20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 TCERG1LQ5VWI1 586 aa20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 ZNF746Q6NUN9 644 aaPredicted RBP20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 RIOX2Q8IUF8 465 aa20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 LSM14BQ9BX40 385 aaKnown RBP20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 JPH1Q9HDC5 661 aaPredicted RBP20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 NLRC4Q9NPP4 1024 aa20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 A0A1W2PQJ5 194 aa20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 MAFGO15525 162 aa20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 PLEKP08567 350 aaPredicted RBP20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 NAA30Q147X3 362 aaPredicted RBP20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 STXBP2Q15833 593 aa20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 MEA1Q16626 185 aa20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 GNPTABQ3T906 1256 aa20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 ANO5Q75V66 913 aa20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 NHEJ1Q9H9Q4 299 aaPredicted RBP20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 TXNRD2Q9NNW7 524 aa20.13■□□□□ 0.81
SDR39U1-220ENST00000556548 PAPPA2Q9BXP8 1791 aa20.12■□□□□ 0.81
SDR39U1-220ENST00000556548 LRRC53A6NM62 1247 aa20.12■□□□□ 0.81
SDR39U1-220ENST00000556548 CXCL11O14625 94 aa20.12■□□□□ 0.81
SDR39U1-220ENST00000556548 LYPLA2O95372 231 aa20.12■□□□□ 0.81
SDR39U1-220ENST00000556548 RPL13P26373 211 aaKnown RBP20.12■□□□□ 0.81
SDR39U1-220ENST00000556548 CYP2J2P51589 502 aa20.12■□□□□ 0.81
SDR39U1-220ENST00000556548 FAM102BQ5T8I3 360 aa20.12■□□□□ 0.81
SDR39U1-220ENST00000556548 CACNA2D4Q7Z3S7 1137 aa20.12■□□□□ 0.81
SDR39U1-220ENST00000556548 SYCP3Q8IZU3 236 aa20.12■□□□□ 0.81
SDR39U1-220ENST00000556548 SLC9A2Q9UBY0 812 aa20.12■□□□□ 0.81
SDR39U1-220ENST00000556548 REXO2Q9Y3B8 237 aaKnown RBP20.12■□□□□ 0.81
SDR39U1-220ENST00000556548 SPATA31C2B4DYI2 1134 aa20.11■□□□□ 0.81
SDR39U1-220ENST00000556548 ZNF862O60290 1169 aa20.11■□□□□ 0.81
SDR39U1-220ENST00000556548 CNMDO75829 334 aa20.11■□□□□ 0.81
SDR39U1-220ENST00000556548 SOX10P56693 466 aa20.11■□□□□ 0.81
SDR39U1-220ENST00000556548 MAP1SQ66K74 1059 aaPredicted RBP20.11■□□□□ 0.81
SDR39U1-220ENST00000556548 CYFIP1Q7L576 1253 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms