RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 TMEM119Q4V9L6 283 aa15.67■□□□□ 0.1
VIPAS39-208ENST00000556412 ZNF484Q5JVG2 852 aa15.67■□□□□ 0.1
VIPAS39-208ENST00000556412 KCNK18Q7Z418 384 aa15.67■□□□□ 0.1
VIPAS39-208ENST00000556412 BHMT2Q9H2M3 363 aa15.67■□□□□ 0.1
VIPAS39-208ENST00000556412 CYP26B1Q9NR63 512 aa15.67■□□□□ 0.1
VIPAS39-208ENST00000556412 TUBE1Q9UJT0 475 aa15.67■□□□□ 0.1
VIPAS39-208ENST00000556412 RRN3P2A6NIE6 340 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 TREHO43280 583 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 PFKFB1P16118 471 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 CMA1P23946 247 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 STAT6P42226 847 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 PTPN11Q06124 597 aaPredicted RBP15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 TBC1D8BQ0IIM8 1120 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 HYIQ5T013 277 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 CCDC73Q6ZRK6 1079 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 SESTD1Q86VW0 696 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 SLC43A3Q8NBI5 491 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 MRPS27Q92552 414 aaKnown RBP15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 DHX58Q96C10 678 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 NIFKQ9BYG3 293 aaKnown RBP15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 ANKEF1Q9NU02 776 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 FRMPD3Q5JV73 1810 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 MROH7Q68CQ1 1323 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 A0A087X0B3 334 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 A0A1W2PQ27 194 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 A0A1W2PQ64 194 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 A0A1W2PQD8 194 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 DCDC2CA8MYV0 355 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 ZBTB42B2RXF5 422 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 SLC26A4O43511 780 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 B4GALT4O60513 344 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 USO1O60763 962 aaKnown RBP15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 KLRC1P26715 233 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 RARRES1P49788 294 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 CDK7P50613 346 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 POLGP54098 1239 aaPredicted RBP15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 TLE2Q04725 743 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 METTL13Q8N6R0 699 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 SUGCTQ9HAC7 445 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 KCNH3Q9ULD8 1083 aa15.66■□□□□ 0.1
VIPAS39-208ENST00000556412 COL1A2P08123 1366 aa15.65■□□□□ 0.1
VIPAS39-208ENST00000556412 TLR3O15455 904 aaKnown RBP15.65■□□□□ 0.1
VIPAS39-208ENST00000556412 POLR2DO15514 142 aaKnown RBP15.65■□□□□ 0.1
VIPAS39-208ENST00000556412 GADD45BO75293 160 aaPredicted RBP15.65■□□□□ 0.1
VIPAS39-208ENST00000556412 EYA4O95677 639 aa15.65■□□□□ 0.1
VIPAS39-208ENST00000556412 MARCH8Q5T0T0 291 aa15.65■□□□□ 0.1
VIPAS39-208ENST00000556412 MTHFD1LQ6UB35 978 aa15.65■□□□□ 0.1
VIPAS39-208ENST00000556412 FAM126BQ8IXS8 530 aa15.65■□□□□ 0.1
VIPAS39-208ENST00000556412 SLC7A3Q8WY07 619 aa15.65■□□□□ 0.1
VIPAS39-208ENST00000556412 SEZ6LQ9BYH1 1024 aa15.65■□□□□ 0.1
VIPAS39-208ENST00000556412 GOLPH3LQ9H4A5 285 aa15.65■□□□□ 0.1
VIPAS39-208ENST00000556412 DBR1Q9UK59 544 aaKnown RBP15.65■□□□□ 0.1
VIPAS39-208ENST00000556412 GOLGA6L22H0YM25 854 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 C22orf31O95567 290 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 PLA2G4BP0C869 781 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 CYP2C9P11712 490 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 XRCC6P12956 609 aaKnown RBP eCLIP15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 NDUFA8P51970 172 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 SNX17Q15036 470 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 TARBP2Q15633 366 aaKnown RBP15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 PADI6Q6TGC4 694 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 CLEC17AQ6ZS10 378 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 MAEAQ7L5Y9 396 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 LRRC71Q8N4P6 559 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 TMEM87AQ8NBN3 555 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 LRRC15Q8TF66 581 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 RAD54LQ92698 747 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 FAM49AQ9H0Q0 323 aaPredicted RBP15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 MYH15Q9Y2K3 1946 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 MCM6Q14566 821 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 C1orf53Q5VUE5 145 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 RUFY4Q6ZNE9 571 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 ANKRD33Q7Z3H0 272 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 IQUBQ8NA54 791 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 RETREG2Q8NC44 543 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 LARP4BQ92615 738 aaKnown RBP15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 HTATIP2Q9BUP3 242 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 PRDM5Q9NQX1 630 aaPredicted RBP15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 STK17AQ9UEE5 414 aa15.64■□□□□ 0.09
VIPAS39-208ENST00000556412 HOXC8P31273 242 aa15.63■□□□□ 0.09
VIPAS39-208ENST00000556412 RFC5P40937 340 aa15.63■□□□□ 0.09
VIPAS39-208ENST00000556412 SYKP43405 635 aa15.63■□□□□ 0.09
VIPAS39-208ENST00000556412 CLCN3P51790 818 aa15.63■□□□□ 0.09
VIPAS39-208ENST00000556412 RAD51AP2Q09MP3 1159 aa15.63■□□□□ 0.09
VIPAS39-208ENST00000556412 EMC2Q15006 297 aa15.63■□□□□ 0.09
VIPAS39-208ENST00000556412 EFCAB12Q6NXP0 572 aa15.63■□□□□ 0.09
VIPAS39-208ENST00000556412 ATP6V0A4Q9HBG4 840 aa15.63■□□□□ 0.09
VIPAS39-208ENST00000556412 BLOC1S4Q9NUP1 217 aa15.63■□□□□ 0.09
VIPAS39-208ENST00000556412 MBLAC1A4D2B0 266 aaPredicted RBP15.62■□□□□ 0.09
VIPAS39-208ENST00000556412 MAGEB2O15479 319 aa15.62■□□□□ 0.09
VIPAS39-208ENST00000556412 DGAT1O75907 488 aa15.62■□□□□ 0.09
VIPAS39-208ENST00000556412 ADAM17P78536 824 aa15.62■□□□□ 0.09
VIPAS39-208ENST00000556412 NAALADL2Q58DX5 795 aa15.62■□□□□ 0.09
VIPAS39-208ENST00000556412 GPBP1Q86WP2 473 aa15.62■□□□□ 0.09
VIPAS39-208ENST00000556412 C7orf61Q8IZ16 206 aa15.62■□□□□ 0.09
VIPAS39-208ENST00000556412 KCTD17Q8N5Z5 321 aa15.62■□□□□ 0.09
VIPAS39-208ENST00000556412 DPF3Q92784 378 aa15.62■□□□□ 0.09
VIPAS39-208ENST00000556412 TOX2Q96NM4 488 aa15.62■□□□□ 0.09
VIPAS39-208ENST00000556412 PPP1R16BQ96T49 567 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms