RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 MAGEB2O15479 319 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 CABYRO75952 493 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 FAM13AO94988 1023 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 MYL3P08590 195 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 C6orf222P0C671 652 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-218ENST00000556343 HSPA8P11142 646 aaKnown RBP10.23□□□□□ -0.77
ACTN1-218ENST00000556343 GNAT1P11488 350 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 HOXD8P13378 290 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-218ENST00000556343 CYP11B2P19099 503 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 GUCY2CP25092 1073 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 ABCD1P33897 745 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 SARSP49591 514 aaKnown RBP10.23□□□□□ -0.77
ACTN1-218ENST00000556343 DNM2P50570 870 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 POLGP54098 1239 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-218ENST00000556343 NLRP12P59046 1061 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 UGCGQ16739 394 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 MTERF2Q49AM1 385 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 SLC9C1Q4G0N8 1177 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 HERC4Q5GLZ8 1057 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-218ENST00000556343 GJC2Q5T442 439 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-218ENST00000556343 C1orf186Q6ZWK4 172 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 DYMQ7RTS9 669 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 TRMT1LQ7Z2T5 733 aaKnown RBP10.23□□□□□ -0.77
ACTN1-218ENST00000556343 GRAMD1CQ8IYS0 662 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 MLKLQ8NB16 471 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 RETREG2Q8NC44 543 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 ARRDC4Q8NCT1 418 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 TRPV1Q8NER1 839 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 SPATA20Q8TB22 786 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 TCP11Q8WWU5 503 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 SLC7A3Q8WY07 619 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 KIFAP3Q92845 792 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 DRC1Q96MC2 740 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 PCYT2Q99447 389 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 MTG1Q9BT17 334 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-218ENST00000556343 UPF3AQ9H1J1 476 aaKnown RBP10.23□□□□□ -0.77
ACTN1-218ENST00000556343 ZHX3Q9H4I2 956 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 TUT1Q9H6E5 874 aaKnown RBP10.23□□□□□ -0.77
ACTN1-218ENST00000556343 ATP6V0A4Q9HBG4 840 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 XPNPEP3Q9NQH7 507 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 PANK4Q9NVE7 773 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 SEL1LQ9UBV2 794 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 ODF2LQ9ULJ1 636 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 PLXNA1Q9UIW2 1896 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 DOCK3Q8IZD9 2030 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 A0A087WWV3 80 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 FOXN1O15353 648 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 ZNF862O60290 1169 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 PRR29P0C7W0 189 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 HSPA1AP0DMV8 641 aaKnown RBP10.22□□□□□ -0.77
ACTN1-218ENST00000556343 HSPA1BP0DMV9 641 aaKnown RBP10.22□□□□□ -0.77
ACTN1-218ENST00000556343 CAPN2P17655 700 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 SCP2P22307 547 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 MARK3P27448 753 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 TMOD1P28289 359 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 CCND3P30281 292 aaPredicted RBP10.22□□□□□ -0.77
ACTN1-218ENST00000556343 NKX3-2P78367 333 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 TYRO3Q06418 890 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 TBC1D8BQ0IIM8 1120 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 TRIM32Q13049 653 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 GIT2Q14161 759 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 PLCB4Q15147 1175 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 KMT5BQ4FZB7 885 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 FAM102BQ5T8I3 360 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 ZNF658Q5TYW1 1059 aaPredicted RBP10.22□□□□□ -0.77
ACTN1-218ENST00000556343 FBXO46Q6PJ61 603 aaPredicted RBP10.22□□□□□ -0.77
ACTN1-218ENST00000556343 ANO5Q75V66 913 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 MYCT1Q8N699 235 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 IFT74Q96LB3 600 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 MTRQ99707 1265 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 TSEN34Q9BSV6 310 aaKnown RBP10.22□□□□□ -0.77
ACTN1-218ENST00000556343 C17orf75Q9HAS0 396 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 PARVGQ9HBI0 331 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 LARSQ9P2J5 1176 aaKnown RBP10.22□□□□□ -0.77
ACTN1-218ENST00000556343 WRAP73Q9P2S5 460 aaPredicted RBP10.22□□□□□ -0.77
ACTN1-218ENST00000556343 MAN1B1Q9UKM7 699 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 LCTP09848 1927 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 COL1A2P08123 1366 aa10.22□□□□□ -0.77
ACTN1-218ENST00000556343 MGAMO43451 1857 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 H0YCG3 227 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 BIN1O00499 593 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 ZBTB39O15060 712 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 USO1O60763 962 aaKnown RBP10.21□□□□□ -0.77
ACTN1-218ENST00000556343 RHOBTB3O94955 611 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 STBD1O95210 358 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 ATP4AP20648 1035 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 PSEN2P49810 448 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 LBX1P52954 281 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 SMTNP53814 917 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 NPEPPSP55786 919 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 TPM4P67936 248 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 CDC42EP1Q00587 391 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 CAP1Q01518 475 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 PPFIA1Q13136 1202 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 MORC3Q14149 939 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 MFSD10Q14728 455 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 PPP2R5AQ15172 486 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 ARSHQ5FYA8 562 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 TMEM63BQ5T3F8 832 aa10.21□□□□□ -0.77
ACTN1-218ENST00000556343 IER5Q5VY09 327 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms