RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 Q9UFV3 132 aa5.64□□□□□ -1.51
SCFD1-218ENST00000556256 SH3BP1Q9Y3L3 701 aa5.64□□□□□ -1.51
SCFD1-218ENST00000556256 MAN2B1O00754 1011 aa5.63□□□□□ -1.51
SCFD1-218ENST00000556256 AMY2AP04746 511 aa5.63□□□□□ -1.51
SCFD1-218ENST00000556256 AMY2BP19961 511 aa5.63□□□□□ -1.51
SCFD1-218ENST00000556256 AOAHP28039 575 aa5.63□□□□□ -1.51
SCFD1-218ENST00000556256 MC4RP32245 332 aa5.63□□□□□ -1.51
SCFD1-218ENST00000556256 ADRA1BP35368 520 aa5.63□□□□□ -1.51
SCFD1-218ENST00000556256 GPR19Q15760 415 aa5.63□□□□□ -1.51
SCFD1-218ENST00000556256 CCDC142Q17RM4 750 aa5.63□□□□□ -1.51
SCFD1-218ENST00000556256 OSTM1Q86WC4 334 aa5.63□□□□□ -1.51
SCFD1-218ENST00000556256 MPHOSPH9Q99550 1183 aa5.63□□□□□ -1.51
SCFD1-218ENST00000556256 AMNQ9BXJ7 453 aa5.63□□□□□ -1.51
SCFD1-218ENST00000556256 FAM184BQ9ULE4 1060 aa5.63□□□□□ -1.51
SCFD1-218ENST00000556256 ATP23Q9Y6H3 246 aa5.63□□□□□ -1.51
SCFD1-218ENST00000556256 MPIG6BO95866 241 aa5.62□□□□□ -1.51
SCFD1-218ENST00000556256 C4BPAP04003 597 aaKnown RBP5.62□□□□□ -1.51
SCFD1-218ENST00000556256 ECE1P42892 770 aa5.62□□□□□ -1.51
SCFD1-218ENST00000556256 SCNN1GP51170 649 aa5.62□□□□□ -1.51
SCFD1-218ENST00000556256 TMCO4Q5TGY1 634 aa5.62□□□□□ -1.51
SCFD1-218ENST00000556256 LRCH2Q5VUJ6 765 aa5.62□□□□□ -1.51
SCFD1-218ENST00000556256 KANK2Q63ZY3 851 aa5.62□□□□□ -1.51
SCFD1-218ENST00000556256 TMEM200BQ69YZ2 307 aa5.62□□□□□ -1.51
SCFD1-218ENST00000556256 LRSAM1Q6UWE0 723 aa5.62□□□□□ -1.51
SCFD1-218ENST00000556256 VPS37DQ86XT2 251 aa5.62□□□□□ -1.51
SCFD1-218ENST00000556256 PTRH1Q86Y79 214 aaKnown RBP5.62□□□□□ -1.51
SCFD1-218ENST00000556256 GPR150Q8NGU9 434 aa5.62□□□□□ -1.51
SCFD1-218ENST00000556256 NAF1Q96HR8 494 aaKnown RBP5.62□□□□□ -1.51
SCFD1-218ENST00000556256 CAPN10Q9HC96 672 aa5.62□□□□□ -1.51
SCFD1-218ENST00000556256 ST7Q9NRC1 585 aa5.62□□□□□ -1.51
SCFD1-218ENST00000556256 RPS6KA4O75676 772 aa5.61□□□□□ -1.51
SCFD1-218ENST00000556256 FBLP22087 321 aaKnown RBP5.61□□□□□ -1.51
SCFD1-218ENST00000556256 IFRD2Q12894 506 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-218ENST00000556256 PAK1Q13153 545 aa5.61□□□□□ -1.51
SCFD1-218ENST00000556256 RIN1Q13671 783 aa5.61□□□□□ -1.51
SCFD1-218ENST00000556256 MOGSQ13724 837 aa5.61□□□□□ -1.51
SCFD1-218ENST00000556256 SAFB2Q14151 953 aaKnown RBP eCLIP5.61□□□□□ -1.51
SCFD1-218ENST00000556256 YOD1Q5VVQ6 348 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-218ENST00000556256 Q6ZRM9 215 aa5.61□□□□□ -1.51
SCFD1-218ENST00000556256 WDR48Q8TAF3 677 aa5.61□□□□□ -1.51
SCFD1-218ENST00000556256 CATSPERZQ9NTU4 200 aa5.61□□□□□ -1.51
SCFD1-218ENST00000556256 UCKL1Q9NWZ5 548 aa5.61□□□□□ -1.51
SCFD1-218ENST00000556256 TRAF6Q9Y4K3 522 aa5.61□□□□□ -1.51
SCFD1-218ENST00000556256 WNT9AO14904 365 aa5.6□□□□□ -1.51
SCFD1-218ENST00000556256 GCP02774 474 aa5.6□□□□□ -1.51
SCFD1-218ENST00000556256 PROZP22891 400 aa5.6□□□□□ -1.51
SCFD1-218ENST00000556256 STAT5BP51692 787 aa5.6□□□□□ -1.51
SCFD1-218ENST00000556256 ATXN1P54253 815 aaKnown RBP5.6□□□□□ -1.51
SCFD1-218ENST00000556256 HERVK_113P62684 666 aa5.6□□□□□ -1.51
SCFD1-218ENST00000556256 CSRP2Q16527 193 aa5.6□□□□□ -1.51
SCFD1-218ENST00000556256 FIGNQ5HY92 759 aa5.6□□□□□ -1.51
SCFD1-218ENST00000556256 ANKRD35Q8N283 1001 aa5.6□□□□□ -1.51
SCFD1-218ENST00000556256 CELF2-AS1Q8N7Q2 184 aa5.6□□□□□ -1.51
SCFD1-218ENST00000556256 OR10A5Q9H207 317 aa5.6□□□□□ -1.51
SCFD1-218ENST00000556256 NRDE2Q9H7Z3 1164 aa5.6□□□□□ -1.51
SCFD1-218ENST00000556256 ZNF408Q9H9D4 720 aa5.6□□□□□ -1.51
SCFD1-218ENST00000556256 IQCA1LA6NCM1 817 aa5.59□□□□□ -1.51
SCFD1-218ENST00000556256 PRAMEF25A6NGN4 478 aa5.59□□□□□ -1.51
SCFD1-218ENST00000556256 KRT15P19012 456 aa5.59□□□□□ -1.51
SCFD1-218ENST00000556256 JAM2P57087 298 aa5.59□□□□□ -1.51
SCFD1-218ENST00000556256 CNGB1Q14028 1251 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-218ENST00000556256 TOB2Q14106 344 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-218ENST00000556256 MBNL2Q5VZF2 373 aaKnown RBP5.59□□□□□ -1.51
SCFD1-218ENST00000556256 EP400NLQ6ZTU2 488 aa5.59□□□□□ -1.51
SCFD1-218ENST00000556256 DPH6Q7L8W6 267 aa5.59□□□□□ -1.51
SCFD1-218ENST00000556256 MRGPREQ86SM8 312 aa5.59□□□□□ -1.51
SCFD1-218ENST00000556256 PCDH19Q8TAB3 1148 aa5.59□□□□□ -1.51
SCFD1-218ENST00000556256 FBXW5Q969U6 566 aa5.59□□□□□ -1.51
SCFD1-218ENST00000556256 A0A1W2PRX2 142 aa5.58□□□□□ -1.52
SCFD1-218ENST00000556256 NUDT3O95989 172 aa5.58□□□□□ -1.52
SCFD1-218ENST00000556256 PYGMP11217 842 aa5.58□□□□□ -1.52
SCFD1-218ENST00000556256 STAT3P40763 770 aa5.58□□□□□ -1.52
SCFD1-218ENST00000556256 ZC3H6P61129 1189 aaKnown RBP5.58□□□□□ -1.52
SCFD1-218ENST00000556256 ACAP1Q15027 740 aa5.58□□□□□ -1.52
SCFD1-218ENST00000556256 SEC23AQ15436 765 aa5.58□□□□□ -1.52
SCFD1-218ENST00000556256 GRAMD4Q6IC98 578 aa5.58□□□□□ -1.52
SCFD1-218ENST00000556256 C16orf59Q7L2K0 433 aa5.58□□□□□ -1.52
SCFD1-218ENST00000556256 VRK3Q8IV63 474 aa5.58□□□□□ -1.52
SCFD1-218ENST00000556256 RABGGTAQ92696 567 aa5.58□□□□□ -1.52
SCFD1-218ENST00000556256 MIEF2Q96C03 454 aa5.58□□□□□ -1.52
SCFD1-218ENST00000556256 CBLCQ9ULV8 474 aa5.58□□□□□ -1.52
SCFD1-218ENST00000556256 PCDHA8Q9Y5H6 950 aa5.58□□□□□ -1.52
SCFD1-218ENST00000556256 TRAV20A0A0B4J274 112 aa5.57□□□□□ -1.52
SCFD1-218ENST00000556256 KCNK3O14649 394 aa5.57□□□□□ -1.52
SCFD1-218ENST00000556256 ADCY7P51828 1080 aa5.57□□□□□ -1.52
SCFD1-218ENST00000556256 ATP2C1P98194 919 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-218ENST00000556256 ADAM15Q13444 863 aa5.57□□□□□ -1.52
SCFD1-218ENST00000556256 ZNF662Q6ZS27 426 aa5.57□□□□□ -1.52
SCFD1-218ENST00000556256 GSPT2Q8IYD1 628 aaKnown RBP5.57□□□□□ -1.52
SCFD1-218ENST00000556256 HAS1Q92839 578 aa5.57□□□□□ -1.52
SCFD1-218ENST00000556256 MRRFQ96E11 262 aaKnown RBP5.57□□□□□ -1.52
SCFD1-218ENST00000556256 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.57□□□□□ -1.52
SCFD1-218ENST00000556256 CTDP1Q9Y5B0 961 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-218ENST00000556256 XDHP47989 1333 aa5.56□□□□□ -1.52
SCFD1-218ENST00000556256 ZNF561-AS1K7EIQ3 104 aa5.56□□□□□ -1.52
SCFD1-218ENST00000556256 CLASP2O75122 1294 aaKnown RBP5.56□□□□□ -1.52
SCFD1-218ENST00000556256 MMEP08473 750 aa5.56□□□□□ -1.52
SCFD1-218ENST00000556256 PTGS2P35354 604 aa5.56□□□□□ -1.52
SCFD1-218ENST00000556256 MAN2A2P49641 1150 aa5.56□□□□□ -1.52
SCFD1-218ENST00000556256 MRPS21P82921 87 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms