RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 RNF146Q9NTX7 359 aa8.16□□□□□ -1.1
ATXN3-236ENST00000556220 CYP39A1Q9NYL5 469 aa8.16□□□□□ -1.1
ATXN3-236ENST00000556220 SCN5AQ14524 2016 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 PARP14Q460N5 1801 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 A6NJR5 290 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 GOLIM4O00461 696 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 IPO8O15397 1037 aaKnown RBP8.15□□□□□ -1.1
ATXN3-236ENST00000556220 ANP32CO43423 234 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 NBNO60934 754 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 MBD4O95243 580 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 NID1P14543 1247 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 SELPP16109 830 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 LTBRP36941 435 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 IKBKEQ14164 716 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 PTGISQ16647 500 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 TCTN1Q2MV58 587 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 EPC2Q52LR7 807 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 FAM117BQ6P1L5 589 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 ERMP1Q7Z2K6 904 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 AACSQ86V21 672 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 SUGP1Q8IWZ8 645 aaKnown RBP8.15□□□□□ -1.1
ATXN3-236ENST00000556220 CTAGE1Q96RT6 745 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 NSUN3Q9H649 340 aaKnown RBP8.15□□□□□ -1.1
ATXN3-236ENST00000556220 MKNK2Q9HBH9 465 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 ALG13Q9NP73 1137 aaKnown RBP8.15□□□□□ -1.1
ATXN3-236ENST00000556220 FAM86C1Q9NVL1 165 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 CLDND1Q9NY35 253 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 SYNPO2Q9UMS6 1093 aa8.15□□□□□ -1.1
ATXN3-236ENST00000556220 GVINP1Q7Z2Y8 2422 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 ZBED9Q6R2W3 1325 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 IGKV6D-41A0A0C4DH26 115 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 TMEM232C9JQI7 657 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 H3BNC9 293 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 NKRFO15226 690 aaKnown RBP eCLIP8.14□□□□□ -1.11
ATXN3-236ENST00000556220 LILRB5O75023 590 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 BMP3P12645 472 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 ALAS1P13196 640 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 TRIM27P14373 513 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 ADD2P35612 726 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 HTRA4P83105 476 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-236ENST00000556220 RBL2Q08999 1139 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 DPYDQ12882 1025 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 GPM6BQ13491 265 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 CRTC2Q53ET0 693 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-236ENST00000556220 SLFN13Q68D06 897 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 C8orf86Q6ZUL3 223 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 LRRC8DQ7L1W4 858 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 RPAINQ86UA6 219 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 GMCL1P1Q8NEA9 526 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 CHURC1Q8WUH1 139 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 STAG1Q8WVM7 1258 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 DHX38Q92620 1227 aaKnown RBP8.14□□□□□ -1.11
ATXN3-236ENST00000556220 ATOH1Q92858 354 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-236ENST00000556220 SAMD11Q96NU1 681 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 VRTNQ9H8Y1 702 aa8.14□□□□□ -1.11
ATXN3-236ENST00000556220 RAD50Q92878 1312 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 LOC102724159A0A0B4J2E5 919 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 PROB1E7EW31 1015 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 TGFBR3LH3BV60 316 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 STXBP3O00186 592 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 MBTPS2O43462 519 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 TTLL1O95922 423 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 CKBP12277 381 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 STAT2P52630 851 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 ZXDAP98168 799 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 PWP2Q15269 919 aaKnown RBP8.13□□□□□ -1.11
ATXN3-236ENST00000556220 SBK1Q52WX2 424 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 MUM1L1Q5H9M0 696 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 GDF6Q6KF10 455 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-236ENST00000556220 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.13□□□□□ -1.11
ATXN3-236ENST00000556220 FAM160B2Q86V87 743 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 SESTD1Q86VW0 696 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 ANKMY2Q8IV38 441 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 LRRC47Q8N1G4 583 aaKnown RBP8.13□□□□□ -1.11
ATXN3-236ENST00000556220 FBXL6Q8N531 539 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 DNAJC2Q99543 621 aaKnown RBP8.13□□□□□ -1.11
ATXN3-236ENST00000556220 GSX2Q9BZM3 304 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 MTMR4Q9NYA4 1195 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 ADD3Q9UEY8 706 aaKnown RBP8.13□□□□□ -1.11
ATXN3-236ENST00000556220 TNNQ9UQP3 1299 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 SLC4A4Q9Y6R1 1079 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 EP300Q09472 2414 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-236ENST00000556220 SCN10AQ9Y5Y9 1956 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 EPG5Q9HCE0 2579 aa8.13□□□□□ -1.11
ATXN3-236ENST00000556220 DNAH14Q0VDD8 3507 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 PLA2G6O60733 806 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 AMHP03971 560 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 AVPR2P30518 371 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 ALDH5A1P51649 535 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-236ENST00000556220 CHMP4BP1P59074 171 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 DLX2Q07687 328 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-236ENST00000556220 SMAD4Q13485 552 aaKnown RBP8.12□□□□□ -1.11
ATXN3-236ENST00000556220 CCINQ13939 588 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 BAATQ14032 418 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-236ENST00000556220 UBE3CQ15386 1083 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 CLUL1Q15846 466 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 NSMFQ6X4W1 530 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 ERC1Q8IUD2 1116 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 TMEM192Q8IY95 271 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 MYOCDQ8IZQ8 938 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms