RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 BMPR1AP36894 532 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 NDUFV1P49821 464 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 SMAD4Q13485 552 aaKnown RBP6.72□□□□□ -1.33
PRKCH-220ENST00000556164 BTG3Q14201 252 aaPredicted RBP6.72□□□□□ -1.33
PRKCH-220ENST00000556164 NEDD9Q14511 834 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 IMMTQ16891 758 aaKnown RBP6.72□□□□□ -1.33
PRKCH-220ENST00000556164 CTC1Q2NKJ3 1217 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 MAP7D1Q3KQU3 841 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 GNPTABQ3T906 1256 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 HERC4Q5GLZ8 1057 aaPredicted RBP6.72□□□□□ -1.33
PRKCH-220ENST00000556164 UTP14CQ5TAP6 766 aaKnown RBP6.72□□□□□ -1.33
PRKCH-220ENST00000556164 DESI1Q6ICB0 168 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 CWC27Q6UX04 472 aaKnown RBP6.72□□□□□ -1.33
PRKCH-220ENST00000556164 METTL7BQ6UX53 244 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 CYFIP1Q7L576 1253 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 SAMD3Q8N6K7 520 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 LMBR1Q8WVP7 490 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 RNF34Q969K3 372 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 MTMR8Q96EF0 704 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 SPACA7Q96KW9 195 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 GPR20Q99678 358 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 USP26Q9BXU7 913 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 RBCK1Q9BYM8 510 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 KRT23Q9C075 422 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 CNNM2Q9H8M5 875 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 DIAPH3Q9NSV4 1193 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 MAD2L2Q9UI95 211 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 CD207Q9UJ71 328 aa6.72□□□□□ -1.33
PRKCH-220ENST00000556164 SUPT16HQ9Y5B9 1047 aaKnown RBP6.72□□□□□ -1.33
PRKCH-220ENST00000556164 FNDC1Q4ZHG4 1894 aaPredicted RBP6.72□□□□□ -1.33
PRKCH-220ENST00000556164 EVPLQ92817 2033 aa6.71□□□□□ -1.33
PRKCH-220ENST00000556164 LINC01565O15544 149 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 FIBPO43427 364 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 CHRNA1P02708 482 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 MMP1P03956 469 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 LINC00271P0C7V0 271 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 SCNN1AP37088 669 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 MRPS9P82933 396 aaKnown RBP6.71□□□□□ -1.34
PRKCH-220ENST00000556164 TRAF1Q13077 416 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 FAM26DQ5JW98 314 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 RUFY4Q6ZNE9 571 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 RSPH3Q86UC2 560 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 SIX5Q8N196 739 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 TMEM87AQ8NBN3 555 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 PIBF1Q8WXW3 757 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 EDAQ92838 391 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 PPP2R3CQ969Q6 453 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 PIGSQ96S52 555 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 RC3H2Q9HBD1 1191 aaKnown RBP6.71□□□□□ -1.34
PRKCH-220ENST00000556164 ALG13Q9NP73 1137 aaKnown RBP6.71□□□□□ -1.34
PRKCH-220ENST00000556164 RTEL1Q9NZ71 1219 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 TELO2Q9Y4R8 837 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 NRCAMQ92823 1304 aa6.71□□□□□ -1.34
PRKCH-220ENST00000556164 TRIOO75962 3097 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 PNMA6FA0A0J9YX94 578 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 TMEM221A6NGB7 291 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 SPATA31C2B4DYI2 1134 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 M0R296 226 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 TPD52L2O43399 206 aaKnown RBP6.7□□□□□ -1.34
PRKCH-220ENST00000556164 STAM2O75886 525 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 P4HBP07237 508 aaKnown RBP6.7□□□□□ -1.34
PRKCH-220ENST00000556164 MARK3P27448 753 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 ICAM3P32942 547 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 PTPN5P54829 565 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 ADAM17P78536 824 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 FANCCQ00597 558 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 PPFIA1Q13136 1202 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 ADAM15Q13444 863 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 HDAC1Q13547 482 aaPredicted RBP6.7□□□□□ -1.34
PRKCH-220ENST00000556164 LPIN1Q14693 890 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 GRM4Q14833 912 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 SEC23AQ15436 765 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 SLC35G1Q2M3R5 365 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 EML3Q32P44 896 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 PAN2Q504Q3 1202 aaKnown RBP6.7□□□□□ -1.34
PRKCH-220ENST00000556164 TAF2Q6P1X5 1199 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 CYB5R4Q7L1T6 521 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 SUGP1Q8IWZ8 645 aaKnown RBP6.7□□□□□ -1.34
PRKCH-220ENST00000556164 PHTF2Q8N3S3 785 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 PRSS33Q8NF86 280 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 SNX27Q96L92 541 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 INPP4AQ96PE3 977 aaPredicted RBP6.7□□□□□ -1.34
PRKCH-220ENST00000556164 DSCC1Q9BVC3 393 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 PLVAPQ9BX97 442 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 EHMT1Q9H9B1 1298 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 CAPN10Q9HC96 672 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 DNAAF2Q9NVR5 837 aaKnown RBP6.7□□□□□ -1.34
PRKCH-220ENST00000556164 MAGEC2Q9UBF1 373 aaPredicted RBP6.7□□□□□ -1.34
PRKCH-220ENST00000556164 TUBE1Q9UJT0 475 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 PLAGL2Q9UPG8 496 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 PCDHGA4Q9Y5G9 962 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 MRPL42Q9Y6G3 142 aaKnown RBP6.7□□□□□ -1.34
PRKCH-220ENST00000556164 MYO10Q9HD67 2058 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 FRMPD4Q14CM0 1322 aa6.7□□□□□ -1.34
PRKCH-220ENST00000556164 ERICH2A1L162 156 aa6.69□□□□□ -1.34
PRKCH-220ENST00000556164 HIP1O00291 1037 aa6.69□□□□□ -1.34
PRKCH-220ENST00000556164 ENPP3O14638 875 aa6.69□□□□□ -1.34
PRKCH-220ENST00000556164 CYTH3O43739 400 aa6.69□□□□□ -1.34
PRKCH-220ENST00000556164 DGKIO75912 1065 aa6.69□□□□□ -1.34
PRKCH-220ENST00000556164 DKK1O94907 266 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms