RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 CNTNAP5Q8WYK1 1306 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 SEPT8Q92599 483 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 ZNF516Q92618 1163 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 NRCAMQ92823 1304 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 PCMTD1Q96MG8 357 aaPredicted RBP7.65□□□□□ -1.18
PSEN1-216ENST00000556066 TGS1Q96RS0 853 aaKnown RBP7.65□□□□□ -1.18
PSEN1-216ENST00000556066 PRR14Q9BWN1 585 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 OSBPL7Q9BZF2 842 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 RBM19Q9Y4C8 960 aaKnown RBP7.65□□□□□ -1.18
PSEN1-216ENST00000556066 UBIAD1Q9Y5Z9 338 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 WDR81Q562E7 1941 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 GSTTP1A0A1W2PQM5 241 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 LINC01553A4QN01 128 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 SMCO2A6NFE2 343 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 CAND2O75155 1236 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 CPA1P15085 419 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 HOXC8P31273 242 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 ZNF76P36508 570 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 KCNQ1P51787 676 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 ADCY7P51828 1080 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 GRIK4Q16099 956 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 AAK1Q2M2I8 961 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 RUFY4Q6ZNE9 571 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 CYP2W1Q8TAV3 490 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 YME1L1Q96TA2 773 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 MXRA8Q9BRK3 442 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 SDF4Q9BRK5 362 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 ANO3Q9BYT9 981 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 IFIH1Q9BYX4 1025 aaKnown RBP7.64□□□□□ -1.19
PSEN1-216ENST00000556066 SMARCAD1Q9H4L7 1026 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 SUGCTQ9HAC7 445 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 JPH1Q9HDC5 661 aaPredicted RBP7.64□□□□□ -1.19
PSEN1-216ENST00000556066 RIC8AQ9NPQ8 531 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 JADE2Q9NQC1 790 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 KCNH7Q9NS40 1196 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 TMEM260Q9NX78 707 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 ERAP1Q9NZ08 941 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 TUBE1Q9UJT0 475 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 INSL6Q9Y581 213 aa7.64□□□□□ -1.19
PSEN1-216ENST00000556066 DDX39AO00148 427 aaKnown RBP7.63□□□□□ -1.19
PSEN1-216ENST00000556066 STXBP3O00186 592 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 MAFGO15525 162 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 LPXNO60711 386 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 FOSP01100 380 aaPredicted RBP7.63□□□□□ -1.19
PSEN1-216ENST00000556066 CHRNA1P02708 482 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 ARP10275 920 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 GHRP10912 638 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 POU3F3P20264 500 aaPredicted RBP7.63□□□□□ -1.19
PSEN1-216ENST00000556066 CDC27P30260 824 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 ADD1P35611 737 aaKnown RBP7.63□□□□□ -1.19
PSEN1-216ENST00000556066 CLK2P49760 499 aaKnown RBP7.63□□□□□ -1.19
PSEN1-216ENST00000556066 METAP2P50579 478 aaKnown RBP eCLIP7.63□□□□□ -1.19
PSEN1-216ENST00000556066 ERVK-21P61565 698 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 USP46P62068 366 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 ADAM17P78536 824 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 APOBRQ0VD83 1088 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 FUT2Q10981 343 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 TSGA10IPQ3SY00 556 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 JAKMIP3Q5VZ66 844 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 TAF2Q6P1X5 1199 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 Q6ZUG5 572 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 RSPH3Q86UC2 560 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 DNAJB3Q8WWF6 145 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 ZBTB10Q96DT7 871 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 JAKMIP1Q96N16 626 aaKnown RBP7.63□□□□□ -1.19
PSEN1-216ENST00000556066 UIMC1Q96RL1 719 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 C17orf80Q9BSJ5 609 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 LRFN3Q9BTN0 628 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 TRAIPQ9BWF2 469 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 C1QTNF1Q9BXJ1 281 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 FAM49AQ9H0Q0 323 aaPredicted RBP7.63□□□□□ -1.19
PSEN1-216ENST00000556066 EPHX3Q9H6B9 360 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 AZI2Q9H6S1 392 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 BARHL2Q9NY43 387 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 SLC9A2Q9UBY0 812 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 RALGAPA2Q2PPJ7 1873 aa7.63□□□□□ -1.19
PSEN1-216ENST00000556066 TTC3P53804 2025 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 CCDC196A0A1B0GTZ2 297 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.62□□□□□ -1.19
PSEN1-216ENST00000556066 hCG_1984214I3L0E3 225 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 BACH1O14867 736 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 SPTLC1O15269 473 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 PPFIA3O75145 1194 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 SCG2P13521 617 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 INSRRP14616 1297 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 SLC19A1P41440 591 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 ACTR2P61160 394 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 COPS2P61201 443 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 TMEM62Q0P6H9 643 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 TUSC1Q2TAM9 212 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 CEP55Q53EZ4 464 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 FAM26DQ5JW98 314 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 BLOC1S2Q6QNY1 142 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 PLA2G4DQ86XP0 818 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 ZNF713Q8N859 430 aaPredicted RBP7.62□□□□□ -1.19
PSEN1-216ENST00000556066 TRAPPC12Q8WVT3 735 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 APBB2Q92870 758 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 BRF1Q92994 677 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 HLA-CQ95604 372 aa7.62□□□□□ -1.19
PSEN1-216ENST00000556066 TOP1MTQ969P6 601 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms