RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 ATP9AO75110 1047 aa9.31□□□□□ -0.92
PSEN1-215ENST00000556011 IGKV5-2P06315 115 aa9.31□□□□□ -0.92
PSEN1-215ENST00000556011 RBMXP38159 391 aaKnown RBP9.31□□□□□ -0.92
PSEN1-215ENST00000556011 GCKRQ14397 625 aa9.31□□□□□ -0.92
PSEN1-215ENST00000556011 SPOUT1Q5T280 376 aaKnown RBP9.31□□□□□ -0.92
PSEN1-215ENST00000556011 PDXDC2PQ6P474 469 aa9.31□□□□□ -0.92
PSEN1-215ENST00000556011 MRPL43Q8N983 215 aaKnown RBP9.31□□□□□ -0.92
PSEN1-215ENST00000556011 EXD3Q8N9H8 876 aa9.31□□□□□ -0.92
PSEN1-215ENST00000556011 OR6J1Q8NGC5 347 aa9.31□□□□□ -0.92
PSEN1-215ENST00000556011 FGF14Q92915 247 aa9.31□□□□□ -0.92
PSEN1-215ENST00000556011 METTL22Q9BUU2 404 aaPredicted RBP9.31□□□□□ -0.92
PSEN1-215ENST00000556011 HDAC6Q9UBN7 1215 aa9.31□□□□□ -0.92
PSEN1-215ENST00000556011 SEPT9Q9UHD8 586 aaPredicted RBP9.31□□□□□ -0.92
PSEN1-215ENST00000556011 ITGB1BP2Q9UKP3 347 aa9.31□□□□□ -0.92
PSEN1-215ENST00000556011 ADAMTS5Q9UNA0 930 aa9.31□□□□□ -0.92
PSEN1-215ENST00000556011 CACNA1FO60840 1977 aa9.31□□□□□ -0.92
PSEN1-215ENST00000556011 H7C1W4 665 aa9.3□□□□□ -0.92
PSEN1-215ENST00000556011 ENPP3O14638 875 aa9.3□□□□□ -0.92
PSEN1-215ENST00000556011 KPNA6O60684 536 aa9.3□□□□□ -0.92
PSEN1-215ENST00000556011 PAPSS2O95340 614 aaPredicted RBP9.3□□□□□ -0.92
PSEN1-215ENST00000556011 COPB2P35606 906 aa9.3□□□□□ -0.92
PSEN1-215ENST00000556011 FOXK1P85037 733 aa9.3□□□□□ -0.92
PSEN1-215ENST00000556011 HNRNPDQ14103 355 aaKnown RBP9.3□□□□□ -0.92
PSEN1-215ENST00000556011 CXXC5Q7LFL8 322 aaKnown RBP9.3□□□□□ -0.92
PSEN1-215ENST00000556011 SPEM1Q8N4L4 309 aa9.3□□□□□ -0.92
PSEN1-215ENST00000556011 MRPS27Q92552 414 aaKnown RBP9.3□□□□□ -0.92
PSEN1-215ENST00000556011 APBB2Q92870 758 aa9.3□□□□□ -0.92
PSEN1-215ENST00000556011 KIF2CQ99661 725 aa9.3□□□□□ -0.92
PSEN1-215ENST00000556011 TRIM34Q9BYJ4 488 aa9.3□□□□□ -0.92
PSEN1-215ENST00000556011 PHAXQ9H814 394 aaKnown RBP9.3□□□□□ -0.92
PSEN1-215ENST00000556011 SFXN1Q9H9B4 322 aa9.3□□□□□ -0.92
PSEN1-215ENST00000556011 TMPRSS4Q9NRS4 437 aa9.3□□□□□ -0.92
PSEN1-215ENST00000556011 STARD5Q9NSY2 213 aa9.3□□□□□ -0.92
PSEN1-215ENST00000556011 MBD1Q9UIS9 605 aaPredicted RBP9.3□□□□□ -0.92
PSEN1-215ENST00000556011 DDX41Q9UJV9 622 aaKnown RBP9.3□□□□□ -0.92
PSEN1-215ENST00000556011 APOBEC2Q9Y235 224 aaKnown RBP9.3□□□□□ -0.92
PSEN1-215ENST00000556011 THADAQ6YHU6 1953 aa9.3□□□□□ -0.92
PSEN1-215ENST00000556011 SIX3O95343 332 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-215ENST00000556011 HLA-EP13747 358 aa9.29□□□□□ -0.92
PSEN1-215ENST00000556011 SLC4A3P48751 1232 aa9.29□□□□□ -0.92
PSEN1-215ENST00000556011 PFKPQ01813 784 aa9.29□□□□□ -0.92
PSEN1-215ENST00000556011 PREPLQ4J6C6 727 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-215ENST00000556011 BRDTQ58F21 947 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-215ENST00000556011 HDGFL1Q5TGJ6 251 aa9.29□□□□□ -0.92
PSEN1-215ENST00000556011 PARM1Q6UWI2 310 aa9.29□□□□□ -0.92
PSEN1-215ENST00000556011 METTL16Q86W50 562 aaKnown RBP9.29□□□□□ -0.92
PSEN1-215ENST00000556011 ANKRD35Q8N283 1001 aa9.29□□□□□ -0.92
PSEN1-215ENST00000556011 SPATA20Q8TB22 786 aa9.29□□□□□ -0.92
PSEN1-215ENST00000556011 SIN3AQ96ST3 1273 aa9.29□□□□□ -0.92
PSEN1-215ENST00000556011 HEBP1Q9NRV9 189 aa9.29□□□□□ -0.92
PSEN1-215ENST00000556011 HCSTQ9UBK5 93 aa9.29□□□□□ -0.92
PSEN1-215ENST00000556011 PUF60Q9UHX1 559 aaKnown RBP9.29□□□□□ -0.92
PSEN1-215ENST00000556011 LZTS1Q9Y250 596 aa9.29□□□□□ -0.92
PSEN1-215ENST00000556011 COG6Q9Y2V7 657 aa9.29□□□□□ -0.92
PSEN1-215ENST00000556011 CHMP3Q9Y3E7 222 aa9.29□□□□□ -0.92
PSEN1-215ENST00000556011 MYO16Q9Y6X6 1858 aa9.29□□□□□ -0.92
PSEN1-215ENST00000556011 KMT2CQ8NEZ4 4911 aaKnown RBP9.29□□□□□ -0.92
PSEN1-215ENST00000556011 A0A1W2PRG0 241 aa9.28□□□□□ -0.92
PSEN1-215ENST00000556011 SPDYE4A6NLX3 237 aa9.28□□□□□ -0.92
PSEN1-215ENST00000556011 FAM155BO75949 473 aa9.28□□□□□ -0.92
PSEN1-215ENST00000556011 KIAA1614Q5VZ46 1190 aa9.28□□□□□ -0.92
PSEN1-215ENST00000556011 SLC22A17Q8WUG5 538 aa9.28□□□□□ -0.92
PSEN1-215ENST00000556011 STAMQ92783 540 aa9.28□□□□□ -0.92
PSEN1-215ENST00000556011 WDR6Q9NNW5 1121 aaKnown RBP9.28□□□□□ -0.92
PSEN1-215ENST00000556011 FBXO28Q9NVF7 368 aa9.28□□□□□ -0.92
PSEN1-215ENST00000556011 PCDHB9Q9Y5E1 797 aa9.28□□□□□ -0.92
PSEN1-215ENST00000556011 CLUHO75153 1309 aa9.28□□□□□ -0.92
PSEN1-215ENST00000556011 WDR81Q562E7 1941 aa9.27□□□□□ -0.93
PSEN1-215ENST00000556011 A6NJR5 290 aa9.27□□□□□ -0.93
PSEN1-215ENST00000556011 PLK4O00444 970 aa9.27□□□□□ -0.93
PSEN1-215ENST00000556011 VWA5AO00534 786 aa9.27□□□□□ -0.93
PSEN1-215ENST00000556011 CTSHP09668 335 aa9.27□□□□□ -0.93
PSEN1-215ENST00000556011 BMP3P12645 472 aa9.27□□□□□ -0.93
PSEN1-215ENST00000556011 HOXA6P31267 233 aa9.27□□□□□ -0.93
PSEN1-215ENST00000556011 CA8P35219 290 aa9.27□□□□□ -0.93
PSEN1-215ENST00000556011 TMPRSS3P57727 454 aa9.27□□□□□ -0.93
PSEN1-215ENST00000556011 SMC1AQ14683 1233 aaKnown RBP9.27□□□□□ -0.93
PSEN1-215ENST00000556011 WTAPQ15007 396 aa9.27□□□□□ -0.93
PSEN1-215ENST00000556011 CWF19L2Q2TBE0 894 aaKnown RBP9.27□□□□□ -0.93
PSEN1-215ENST00000556011 FOXP4Q8IVH2 680 aaPredicted RBP9.27□□□□□ -0.93
PSEN1-215ENST00000556011 HDDC3Q8N4P3 179 aa9.27□□□□□ -0.93
PSEN1-215ENST00000556011 REPS2Q8NFH8 660 aa9.27□□□□□ -0.93
PSEN1-215ENST00000556011 SNIP1Q8TAD8 396 aaKnown RBP9.27□□□□□ -0.93
PSEN1-215ENST00000556011 U3KPZ7 1027 aaPredicted RBP9.27□□□□□ -0.93
PSEN1-215ENST00000556011 MAP1AP78559 2803 aaPredicted RBP9.27□□□□□ -0.93
PSEN1-215ENST00000556011 MEGF8Q7Z7M0 2845 aa9.27□□□□□ -0.93
PSEN1-215ENST00000556011 DOCK6Q96HP0 2047 aa9.26□□□□□ -0.93
PSEN1-215ENST00000556011 ZNF469Q96JG9 3925 aaPredicted RBP9.26□□□□□ -0.93
PSEN1-215ENST00000556011 SH3BP5O60239 455 aa9.26□□□□□ -0.93
PSEN1-215ENST00000556011 PPP1R37O75864 691 aa9.26□□□□□ -0.93
PSEN1-215ENST00000556011 CD59P13987 128 aa9.26□□□□□ -0.93
PSEN1-215ENST00000556011 ENGP17813 658 aa9.26□□□□□ -0.93
PSEN1-215ENST00000556011 LMAN2Q12907 356 aa9.26□□□□□ -0.93
PSEN1-215ENST00000556011 ELF2Q15723 593 aa9.26□□□□□ -0.93
PSEN1-215ENST00000556011 PDXDC1Q6P996 788 aa9.26□□□□□ -0.93
PSEN1-215ENST00000556011 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.26□□□□□ -0.93
PSEN1-215ENST00000556011 SPICE1Q8N0Z3 855 aa9.26□□□□□ -0.93
PSEN1-215ENST00000556011 C7orf31Q8N865 590 aa9.26□□□□□ -0.93
PSEN1-215ENST00000556011 COLGALT1Q8NBJ5 622 aa9.26□□□□□ -0.93
PSEN1-215ENST00000556011 KAT2BQ92831 832 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms