RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 AGO3Q9H9G7 860 aaKnown RBP15.41■□□□□ 0.06
SNX6-203ENST00000555416 EVPLQ92817 2033 aa15.41■□□□□ 0.06
SNX6-203ENST00000555416 COL1A2P08123 1366 aa15.4■□□□□ 0.06
SNX6-203ENST00000555416 MICAL3Q7RTP6 2002 aa15.4■□□□□ 0.06
SNX6-203ENST00000555416 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.4■□□□□ 0.06
SNX6-203ENST00000555416 ATP2B1P20020 1258 aa15.4■□□□□ 0.06
SNX6-203ENST00000555416 IKBKEQ14164 716 aa15.4■□□□□ 0.06
SNX6-203ENST00000555416 TARBP2Q15633 366 aaKnown RBP15.4■□□□□ 0.06
SNX6-203ENST00000555416 RAB30Q15771 203 aa15.4■□□□□ 0.06
SNX6-203ENST00000555416 FAM184AQ8NB25 1140 aa15.4■□□□□ 0.06
SNX6-203ENST00000555416 RDM1Q8NG50 284 aa15.4■□□□□ 0.06
SNX6-203ENST00000555416 PHOSPHO2Q8TCD6 241 aa15.4■□□□□ 0.06
SNX6-203ENST00000555416 MYLIPQ8WY64 445 aa15.4■□□□□ 0.06
SNX6-203ENST00000555416 CEP89Q96ST8 783 aa15.4■□□□□ 0.06
SNX6-203ENST00000555416 PPP1R16BQ96T49 567 aa15.4■□□□□ 0.06
SNX6-203ENST00000555416 SLC9A7Q96T83 725 aa15.4■□□□□ 0.06
SNX6-203ENST00000555416 MSRAQ9UJ68 235 aa15.4■□□□□ 0.06
SNX6-203ENST00000555416 PCDHA11Q9Y5I1 949 aa15.4■□□□□ 0.06
SNX6-203ENST00000555416 EYSQ5T1H1 3165 aa15.4■□□□□ 0.06
SNX6-203ENST00000555416 LCHNA4D1U4 455 aa15.39■□□□□ 0.05
SNX6-203ENST00000555416 TBX3O15119 743 aa15.39■□□□□ 0.05
SNX6-203ENST00000555416 CA3P07451 260 aa15.39■□□□□ 0.05
SNX6-203ENST00000555416 KCNJ6P48051 423 aa15.39■□□□□ 0.05
SNX6-203ENST00000555416 CLCN3P51790 818 aa15.39■□□□□ 0.05
SNX6-203ENST00000555416 NBR1Q14596 966 aa15.39■□□□□ 0.05
SNX6-203ENST00000555416 FAM117BQ6P1L5 589 aa15.39■□□□□ 0.05
SNX6-203ENST00000555416 RSPH3Q86UC2 560 aa15.39■□□□□ 0.05
SNX6-203ENST00000555416 LINC01465Q8N7H1 131 aa15.39■□□□□ 0.05
SNX6-203ENST00000555416 TMEM40Q8WWA1 233 aa15.39■□□□□ 0.05
SNX6-203ENST00000555416 SEPT8Q92599 483 aa15.39■□□□□ 0.05
SNX6-203ENST00000555416 TNPO1Q92973 898 aaKnown RBP15.39■□□□□ 0.05
SNX6-203ENST00000555416 MTMR9Q96QG7 549 aa15.39■□□□□ 0.05
SNX6-203ENST00000555416 NAP1L4Q99733 375 aaKnown RBP15.39■□□□□ 0.05
SNX6-203ENST00000555416 IFIH1Q9BYX4 1025 aaKnown RBP15.39■□□□□ 0.05
SNX6-203ENST00000555416 CELF4Q9BZC1 486 aaKnown RBP15.39■□□□□ 0.05
SNX6-203ENST00000555416 RGL1Q9NZL6 768 aa15.39■□□□□ 0.05
SNX6-203ENST00000555416 TRPV2Q9Y5S1 764 aa15.39■□□□□ 0.05
SNX6-203ENST00000555416 LOXHD1Q8IVV2 1947 aa15.39■□□□□ 0.05
SNX6-203ENST00000555416 TMEM265A0A087WTH1 108 aa15.38■□□□□ 0.05
SNX6-203ENST00000555416 VTNP04004 478 aa15.38■□□□□ 0.05
SNX6-203ENST00000555416 CD52P31358 61 aa15.38■□□□□ 0.05
SNX6-203ENST00000555416 MCM7P33993 719 aa15.38■□□□□ 0.05
SNX6-203ENST00000555416 DRP2Q13474 957 aa15.38■□□□□ 0.05
SNX6-203ENST00000555416 SAFBQ15424 915 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNX6-203ENST00000555416 CALCRLQ16602 461 aa15.38■□□□□ 0.05
SNX6-203ENST00000555416 TMEM266Q2M3C6 531 aa15.38■□□□□ 0.05
SNX6-203ENST00000555416 PLA2G4FQ68DD2 849 aa15.38■□□□□ 0.05
SNX6-203ENST00000555416 NCAPH2Q6IBW4 605 aa15.38■□□□□ 0.05
SNX6-203ENST00000555416 ANO5Q75V66 913 aa15.38■□□□□ 0.05
SNX6-203ENST00000555416 LRRC71Q8N4P6 559 aa15.38■□□□□ 0.05
SNX6-203ENST00000555416 ZNF579Q8NAF0 562 aaKnown RBP15.38■□□□□ 0.05
SNX6-203ENST00000555416 LINC01599Q8WXQ3 324 aa15.38■□□□□ 0.05
SNX6-203ENST00000555416 FAM167AQ96KS9 214 aa15.38■□□□□ 0.05
SNX6-203ENST00000555416 FOXP1Q9H334 677 aaPredicted RBP15.38■□□□□ 0.05
SNX6-203ENST00000555416 PRDM12Q9H4Q4 367 aa15.38■□□□□ 0.05
SNX6-203ENST00000555416 DDX11L8A8MPP1 907 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 ZBTB39O15060 712 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 NEMFO60524 1076 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 GJB2P29033 226 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 NPEPPSP55786 919 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 PSMC5P62195 406 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 ZNF174Q15697 407 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 KIZQ2M2Z5 673 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 MTERF2Q49AM1 385 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 XKR3Q5GH77 459 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 IER5Q5VY09 327 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 EFCAB12Q6NXP0 572 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 TSHZ1Q6ZSZ6 1077 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 RTN4RL1Q86UN2 441 aaPredicted RBP15.37■□□□□ 0.05
SNX6-203ENST00000555416 NOSTRINQ8IVI9 506 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 METTL13Q8N6R0 699 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 DYDC2Q96IM9 177 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 ZNF668Q96K58 619 aaPredicted RBP15.37■□□□□ 0.05
SNX6-203ENST00000555416 NIFKQ9BYG3 293 aaKnown RBP15.37■□□□□ 0.05
SNX6-203ENST00000555416 SLC28A3Q9HAS3 691 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 NRBP2Q9NSY0 501 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 SEPT9Q9UHD8 586 aaPredicted RBP15.37■□□□□ 0.05
SNX6-203ENST00000555416 GINS2Q9Y248 185 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 STXBP5LQ9Y2K9 1186 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 KDM3AQ9Y4C1 1321 aa15.37■□□□□ 0.05
SNX6-203ENST00000555416 MYO9BQ13459 2157 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 EPOPA6NHQ4 379 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 TLL1O43897 1013 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 MARCH6O60337 910 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 GPR32O75388 356 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 GJB5O95377 273 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 U2AF2P26368 475 aaKnown RBP eCLIP15.36■□□□□ 0.052e-8■■■□□ 17.8
SNX6-203ENST00000555416 TXKP42681 527 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 QARSP47897 775 aaKnown RBP15.36■□□□□ 0.05
SNX6-203ENST00000555416 TOB1P50616 345 aaPredicted RBP15.36■□□□□ 0.05
SNX6-203ENST00000555416 TAP1Q03518 808 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 ADGRE1Q14246 886 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 CTTNQ14247 550 aaKnown RBP15.36■□□□□ 0.05
SNX6-203ENST00000555416 EPHA7Q15375 998 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 PPP2R2DQ66LE6 453 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 SLFN12Q8IYM2 578 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 MYOCDQ8IZQ8 938 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 NME8Q8N427 588 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 TMX1Q9H3N1 280 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 TTC12Q9H892 705 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms