RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 CRTAMO95727 393 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 ASLP04424 464 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 IGFALSP35858 605 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 NANOS3P60323 173 aaKnown RBP7.41□□□□□ -1.22
VRK1-205ENST00000555402 GUCY1A3Q02108 690 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 TESK1Q15569 626 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 VASNQ6EMK4 673 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 IFNL2Q8IZJ0 200 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 FUKQ8N0W3 1084 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 AHI1Q8N157 1196 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 PPM1KQ8N3J5 372 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 LEO1Q8WVC0 666 aaPredicted RBP7.41□□□□□ -1.22
VRK1-205ENST00000555402 PHF20Q9BVI0 1012 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 EPB41L1Q9H4G0 881 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 ASH2LQ9UBL3 628 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 ATP8A1Q9Y2Q0 1164 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 PCDHA9Q9Y5H5 950 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 ASXL2Q76L83 1435 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 JMJD7P0C870 316 aa7.4□□□□□ -1.22
VRK1-205ENST00000555402 LCP1P13796 627 aa7.4□□□□□ -1.22
VRK1-205ENST00000555402 NAT1P18440 290 aa7.4□□□□□ -1.22
VRK1-205ENST00000555402 ZNF460Q14592 562 aa7.4□□□□□ -1.22
VRK1-205ENST00000555402 ACBD5Q5T8D3 534 aaPredicted RBP7.4□□□□□ -1.22
VRK1-205ENST00000555402 Q6ZSN1 163 aa7.4□□□□□ -1.22
VRK1-205ENST00000555402 UBE2R2Q712K3 238 aaPredicted RBP7.4□□□□□ -1.22
VRK1-205ENST00000555402 DDX46Q7L014 1031 aaKnown RBP7.4□□□□□ -1.22
VRK1-205ENST00000555402 RNF180Q86T96 592 aa7.4□□□□□ -1.22
VRK1-205ENST00000555402 RPUSD2Q8IZ73 545 aaKnown RBP7.4□□□□□ -1.22
VRK1-205ENST00000555402 IFNL3Q8IZI9 196 aa7.4□□□□□ -1.22
VRK1-205ENST00000555402 SCLYQ96I15 445 aa7.4□□□□□ -1.22
VRK1-205ENST00000555402 PCDHA8Q9Y5H6 950 aa7.4□□□□□ -1.22
VRK1-205ENST00000555402 A0A087X1B8 175 aa7.39□□□□□ -1.23
VRK1-205ENST00000555402 TCRBV16S1A1N1A0A5B0 115 aa7.39□□□□□ -1.23
VRK1-205ENST00000555402 B4E1Z4 1266 aa7.39□□□□□ -1.23
VRK1-205ENST00000555402 KPNA6O60684 536 aa7.39□□□□□ -1.23
VRK1-205ENST00000555402 LTBRP36941 435 aa7.39□□□□□ -1.23
VRK1-205ENST00000555402 INHBCP55103 352 aa7.39□□□□□ -1.23
VRK1-205ENST00000555402 CFAP100Q494V2 611 aa7.39□□□□□ -1.23
VRK1-205ENST00000555402 TRIM48Q8IWZ4 208 aa7.39□□□□□ -1.23
VRK1-205ENST00000555402 ATL2Q8NHH9 583 aa7.39□□□□□ -1.23
VRK1-205ENST00000555402 ZFYVE21Q9BQ24 234 aa7.39□□□□□ -1.23
VRK1-205ENST00000555402 FAM126AQ9BYI3 521 aaPredicted RBP7.39□□□□□ -1.23
VRK1-205ENST00000555402 KATNBL1Q9H079 304 aa7.39□□□□□ -1.23
VRK1-205ENST00000555402 MCM8Q9UJA3 840 aa7.39□□□□□ -1.23
VRK1-205ENST00000555402 MAFKO60675 156 aa7.38□□□□□ -1.23
VRK1-205ENST00000555402 FBXO21O94952 628 aa7.38□□□□□ -1.23
VRK1-205ENST00000555402 CKMP06732 381 aa7.38□□□□□ -1.23
VRK1-205ENST00000555402 CPEP16870 476 aa7.38□□□□□ -1.23
VRK1-205ENST00000555402 ACO1P21399 889 aaKnown RBP7.38□□□□□ -1.23
VRK1-205ENST00000555402 EVA1CP58658 441 aa7.38□□□□□ -1.23
VRK1-205ENST00000555402 GPR85P60893 370 aa7.38□□□□□ -1.23
VRK1-205ENST00000555402 CYP4F22Q6NT55 531 aa7.38□□□□□ -1.23
VRK1-205ENST00000555402 RSPO2Q6UXX9 243 aaPredicted RBP7.38□□□□□ -1.23
VRK1-205ENST00000555402 C1orf210Q8IVY1 113 aa7.38□□□□□ -1.23
VRK1-205ENST00000555402 TTLL11Q8NHH1 800 aa7.38□□□□□ -1.23
VRK1-205ENST00000555402 NEU4Q8WWR8 484 aaPredicted RBP7.38□□□□□ -1.23
VRK1-205ENST00000555402 CLEC4DQ8WXI8 215 aa7.38□□□□□ -1.23
VRK1-205ENST00000555402 GPR27Q9NS67 375 aa7.38□□□□□ -1.23
VRK1-205ENST00000555402 HOMER2Q9NSB8 354 aa7.38□□□□□ -1.23
VRK1-205ENST00000555402 DDX56Q9NY93 547 aaKnown RBP7.38□□□□□ -1.23
VRK1-205ENST00000555402 GLRBP48167 497 aa7.37□□□□□ -1.23
VRK1-205ENST00000555402 GRIN1Q05586 938 aa7.37□□□□□ -1.23
VRK1-205ENST00000555402 STRN3Q13033 797 aa7.37□□□□□ -1.23
VRK1-205ENST00000555402 PCBP1Q15365 356 aaKnown RBP eCLIP7.37□□□□□ -1.23
VRK1-205ENST00000555402 DDX42Q86XP3 938 aaKnown RBP eCLIP7.37□□□□□ -1.23
VRK1-205ENST00000555402 ZC3H7AQ8IWR0 971 aaKnown RBP7.37□□□□□ -1.23
VRK1-205ENST00000555402 REXO1L1PQ8IX06 675 aa7.37□□□□□ -1.23
VRK1-205ENST00000555402 DNAJC10Q8IXB1 793 aa7.37□□□□□ -1.23
VRK1-205ENST00000555402 PRPF38AQ8NAV1 312 aaKnown RBP7.37□□□□□ -1.23
VRK1-205ENST00000555402 WNK4Q96J92 1243 aa7.37□□□□□ -1.23
VRK1-205ENST00000555402 ALG1Q9BT22 464 aa7.37□□□□□ -1.23
VRK1-205ENST00000555402 ZFP69BQ9UJL9 534 aa7.37□□□□□ -1.23
VRK1-205ENST00000555402 PTPN22Q9Y2R2 807 aa7.37□□□□□ -1.23
VRK1-205ENST00000555402 NPFFR2Q9Y5X5 522 aa7.37□□□□□ -1.23
VRK1-205ENST00000555402 RAD17O75943 681 aa7.36□□□□□ -1.23
VRK1-205ENST00000555402 C1SP09871 688 aa7.36□□□□□ -1.23
VRK1-205ENST00000555402 SRGAP2CP0DJJ0 459 aa7.36□□□□□ -1.23
VRK1-205ENST00000555402 CDKN1CP49918 316 aaPredicted RBP7.36□□□□□ -1.23
VRK1-205ENST00000555402 USP10Q14694 798 aaKnown RBP7.36□□□□□ -1.23
VRK1-205ENST00000555402 KRTAP15-1Q3LI76 137 aa7.36□□□□□ -1.23
VRK1-205ENST00000555402 PIK3R6Q5UE93 754 aa7.36□□□□□ -1.23
VRK1-205ENST00000555402 CDCA2Q69YH5 1023 aaPredicted RBP7.36□□□□□ -1.23
VRK1-205ENST00000555402 DDX53Q86TM3 631 aaKnown RBP7.36□□□□□ -1.23
VRK1-205ENST00000555402 STPG3Q8N7X2 389 aa7.36□□□□□ -1.23
VRK1-205ENST00000555402 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.36□□□□□ -1.23
VRK1-205ENST00000555402 PLEKHG4BQ96PX9 1271 aa7.36□□□□□ -1.23
VRK1-205ENST00000555402 METTL14Q9HCE5 456 aaKnown RBP7.36□□□□□ -1.23
VRK1-205ENST00000555402 SLC6A20Q9NP91 592 aa7.36□□□□□ -1.23
VRK1-205ENST00000555402 KCND1Q9NSA2 647 aa7.36□□□□□ -1.23
VRK1-205ENST00000555402 KRIT1O00522 736 aa7.35□□□□□ -1.23
VRK1-205ENST00000555402 SLC27A2O14975 620 aa7.35□□□□□ -1.23
VRK1-205ENST00000555402 MSCO60682 206 aa7.35□□□□□ -1.23
VRK1-205ENST00000555402 ZNF888P0CJ79 500 aaPredicted RBP7.35□□□□□ -1.23
VRK1-205ENST00000555402 POU3F2P20265 443 aaPredicted RBP7.35□□□□□ -1.23
VRK1-205ENST00000555402 RAC3P60763 192 aa7.35□□□□□ -1.23
VRK1-205ENST00000555402 SKIDA1Q1XH10 827 aa7.35□□□□□ -1.23
VRK1-205ENST00000555402 ZCCHC8Q6NZY4 707 aaKnown RBP7.35□□□□□ -1.23
VRK1-205ENST00000555402 LBX2Q6XYB7 198 aa7.35□□□□□ -1.23
VRK1-205ENST00000555402 CDIP1Q9H305 208 aa7.35□□□□□ -1.23
VRK1-205ENST00000555402 SAMD15Q9P1V8 674 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms