RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 B4GALT4O60513 344 aa14.16□□□□□ -0.14
SYNE2-219ENST00000555323 EYA4O95677 639 aa14.16□□□□□ -0.14
SYNE2-219ENST00000555323 ATN1P54259 1190 aaPredicted RBP14.16□□□□□ -0.14
SYNE2-219ENST00000555323 KARSQ15046 597 aaKnown RBP14.16□□□□□ -0.14
SYNE2-219ENST00000555323 KCNK18Q7Z418 384 aa14.16□□□□□ -0.14
SYNE2-219ENST00000555323 RPAINQ86UA6 219 aa14.16□□□□□ -0.14
SYNE2-219ENST00000555323 EXOC8Q8IYI6 725 aa14.16□□□□□ -0.14
SYNE2-219ENST00000555323 PIGOQ8TEQ8 1089 aa14.16□□□□□ -0.14
SYNE2-219ENST00000555323 PDLIM7Q9NR12 457 aa14.16□□□□□ -0.14
SYNE2-219ENST00000555323 SEPT9Q9UHD8 586 aaPredicted RBP14.16□□□□□ -0.14
SYNE2-219ENST00000555323 HPSEQ9Y251 543 aa14.16□□□□□ -0.14
SYNE2-219ENST00000555323 PCDHA2Q9Y5H9 948 aa14.16□□□□□ -0.14
SYNE2-219ENST00000555323 WDR81Q562E7 1941 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 MYH9P35579 1960 aaKnown RBP14.15□□□□□ -0.14
SYNE2-219ENST00000555323 A0A087WWV3 80 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 TMEM150BA6NC51 233 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 TREHO43280 583 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 MAFO75444 373 aaPredicted RBP14.15□□□□□ -0.14
SYNE2-219ENST00000555323 PLCG1P19174 1290 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 KLRC1P26715 233 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 NPEPPSP55786 919 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 RTP1P59025 263 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 CHMP4BP1P59074 171 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 ZNF200P98182 395 aaPredicted RBP14.15□□□□□ -0.14
SYNE2-219ENST00000555323 TLE2Q04725 743 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 FAAP100Q0VG06 881 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 PTGISQ16647 500 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 TRIM60Q495X7 471 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 NAALADL2Q58DX5 795 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 XKR9Q5GH70 373 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 FAM47CQ5HY64 1035 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 MTHFD1LQ6UB35 978 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 CCDC73Q6ZRK6 1079 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 TRMT1LQ7Z2T5 733 aaKnown RBP14.15□□□□□ -0.14
SYNE2-219ENST00000555323 SERINC5Q86VE9 423 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 LINC01465Q8N7H1 131 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 SYT2Q8N9I0 419 aaPredicted RBP14.15□□□□□ -0.14
SYNE2-219ENST00000555323 LRRC15Q8TF66 581 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 PPP1R13LQ8WUF5 828 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 CDK5RAP3Q96JB5 506 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 CEP170P1Q96L14 293 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 PYM1Q9BRP8 204 aaKnown RBP14.15□□□□□ -0.14
SYNE2-219ENST00000555323 DHX33Q9H6R0 707 aaKnown RBP14.15□□□□□ -0.14
SYNE2-219ENST00000555323 BLOC1S4Q9NUP1 217 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 TRMT13Q9NUP7 481 aaKnown RBP14.15□□□□□ -0.14
SYNE2-219ENST00000555323 FAM13BQ9NYF5 915 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 STK17AQ9UEE5 414 aa14.15□□□□□ -0.14
SYNE2-219ENST00000555323 MKI67P46013 3256 aaKnown RBP14.15□□□□□ -0.14
SYNE2-219ENST00000555323 A0A087X0B3 334 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 SMIM35A0A1B0GVV1 85 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 DCDC2CA8MYV0 355 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 E9PMD0 336 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 TLR3O15455 904 aaKnown RBP14.14□□□□□ -0.15
SYNE2-219ENST00000555323 DGAT1O75907 488 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 C22orf31O95567 290 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 RPLP2P05387 115 aaKnown RBP14.14□□□□□ -0.15
SYNE2-219ENST00000555323 RFC5P40937 340 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 SLC12A3P55017 1021 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 RBL2Q08999 1139 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 PTK7Q13308 1070 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 E2F4Q16254 413 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 MTERF2Q49AM1 385 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 RRAGBQ5VZM2 374 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 PLA2G4FQ68DD2 849 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 TAF2Q6P1X5 1199 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 PPP4R3CPQ6ZMV5 832 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 TRAPPC12Q8WVT3 735 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 GBP4Q96PP9 640 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 JPH2Q9BR39 696 aaPredicted RBP14.14□□□□□ -0.15
SYNE2-219ENST00000555323 HTATIP2Q9BUP3 242 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 TRPV6Q9H1D0 765 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 BHMT2Q9H2M3 363 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 TUBE1Q9UJT0 475 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 KCNH3Q9ULD8 1083 aa14.14□□□□□ -0.15
SYNE2-219ENST00000555323 A0A1B0GVL5 298 aa14.13□□□□□ -0.15
SYNE2-219ENST00000555323 GAS2O43903 313 aaKnown RBP14.13□□□□□ -0.15
SYNE2-219ENST00000555323 PQBP1O60828 265 aaKnown RBP14.13□□□□□ -0.15
SYNE2-219ENST00000555323 IGBP1P78318 339 aa14.13□□□□□ -0.15
SYNE2-219ENST00000555323 TBC1D8BQ0IIM8 1120 aa14.13□□□□□ -0.15
SYNE2-219ENST00000555323 ZRSR1Q15695 479 aaKnown RBP14.13□□□□□ -0.15
SYNE2-219ENST00000555323 NME8Q8N427 588 aa14.13□□□□□ -0.15
SYNE2-219ENST00000555323 IQUBQ8NA54 791 aa14.13□□□□□ -0.15
SYNE2-219ENST00000555323 RAD54LQ92698 747 aa14.13□□□□□ -0.15
SYNE2-219ENST00000555323 PLIN2Q99541 437 aa14.13□□□□□ -0.15
SYNE2-219ENST00000555323 SH2D3AQ9BRG2 576 aa14.13□□□□□ -0.15
SYNE2-219ENST00000555323 PANK2Q9BZ23 570 aa14.13□□□□□ -0.15
SYNE2-219ENST00000555323 CUEDC2Q9H467 287 aa14.13□□□□□ -0.15
SYNE2-219ENST00000555323 KCND2Q9NZV8 630 aa14.13□□□□□ -0.15
SYNE2-219ENST00000555323 GOLGA6L4A6NEF3 574 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 POLR2DO15514 142 aaKnown RBP14.12□□□□□ -0.15
SYNE2-219ENST00000555323 CAND2O75155 1236 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 PLA2G4BP0C869 781 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 PFKFB1P16118 471 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 CYP11B2P19099 503 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 MKRN4PQ13434 485 aaPredicted RBP14.12□□□□□ -0.15
SYNE2-219ENST00000555323 TRIM71Q2Q1W2 868 aaKnown RBP14.12□□□□□ -0.15
SYNE2-219ENST00000555323 RINT1Q6NUQ1 792 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 EFCAB12Q6NXP0 572 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 PADI6Q6TGC4 694 aa14.12□□□□□ -0.15
SYNE2-219ENST00000555323 C1orf186Q6ZWK4 172 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms