RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 LTBRP36941 435 aa5.69□□□□□ -1.5
PPP4R3A-204ENST00000554574 SEPHS1P49903 392 aa5.69□□□□□ -1.5
PPP4R3A-204ENST00000554574 MTX1Q13505 466 aa5.69□□□□□ -1.5
PPP4R3A-204ENST00000554574 LRRC41Q15345 812 aa5.69□□□□□ -1.5
PPP4R3A-204ENST00000554574 RTP2Q5QGT7 225 aa5.69□□□□□ -1.5
PPP4R3A-204ENST00000554574 DDX53Q86TM3 631 aaKnown RBP5.69□□□□□ -1.5
PPP4R3A-204ENST00000554574 CLEC10AQ8IUN9 316 aa5.69□□□□□ -1.5
PPP4R3A-204ENST00000554574 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.69□□□□□ -1.5
PPP4R3A-204ENST00000554574 SSBP4Q9BWG4 385 aaPredicted RBP5.69□□□□□ -1.5
PPP4R3A-204ENST00000554574 UPF2Q9HAU5 1272 aaKnown RBP5.69□□□□□ -1.5
PPP4R3A-204ENST00000554574 COQ6Q9Y2Z9 468 aa5.69□□□□□ -1.5
PPP4R3A-204ENST00000554574 ZNF831Q5JPB2 1677 aa5.69□□□□□ -1.5
PPP4R3A-204ENST00000554574 BCL9O00512 1426 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 SHTN1A0MZ66 631 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 HMX2A2RU54 273 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 FAM170BA6NMN3 283 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 WASH4PA8MWX3 477 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 M0R2C6 588 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 ZNF205O95201 554 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 CKMP06732 381 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 SCNN1BP51168 640 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 NEK2P51955 445 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 NEXNQ0ZGT2 675 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 E4F1Q66K89 784 aaPredicted RBP5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 RCSD1Q6JBY9 416 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 LBX2Q6XYB7 198 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 ZNF765Q7L2R6 523 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 ZC3H7AQ8IWR0 971 aaKnown RBP5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 C7orf69Q9H7B7 122 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 TMOD3Q9NYL9 352 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 SPATA31A1Q5TZJ5 1347 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 GRM8O00222 908 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 WIPF1O43516 503 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 TSPAN6O43657 245 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 MAP4K4O95819 1239 aaPredicted RBP5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 GSTM1P09488 218 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 MYL6BP14649 208 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 NAT1P18440 290 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 ADCYAP1R1P41586 468 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 NOP2P46087 812 aaKnown RBP5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 TBX4P57082 545 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 DSG1Q02413 1049 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 AIMP1Q12904 312 aaKnown RBP5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 TTC22Q5TAA0 569 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 MBLAC2Q68D91 279 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 COPS6Q7L5N1 327 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 PPP1R42Q7Z4L9 355 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 KSR1Q8IVT5 923 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 CNTD1Q8N815 330 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 RCBTB1Q8NDN9 531 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 PCDH19Q8TAB3 1148 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 DIO2Q92813 273 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 METTL22Q9BUU2 404 aaPredicted RBP5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 LRRCC1Q9C099 1032 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 C9orf78Q9NZ63 289 aaPredicted RBP5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 TRHDEQ9UKU6 1024 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 APOBEC2Q9Y235 224 aaKnown RBP5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 EXOC6BQ9Y2D4 811 aa5.68□□□□□ -1.5
PPP4R3A-204ENST00000554574 COL15A1P39059 1388 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 COL5A3P25940 1745 aaPredicted RBP5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 SALL3Q9BXA9 1300 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 RREB1Q92766 1687 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 MYH14Q7Z406 1995 aaKnown RBP5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 CCDC194A0A1B0GVG4 234 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 FAM155AB1AL88 458 aaPredicted RBP5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 WDR64B1ANS9 1081 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 TRAF5O00463 557 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 EXOC5O00471 708 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 SRGAP3O43295 1099 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 ZEB2O60315 1214 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 EIF5BO60841 1220 aaKnown RBP5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 SCGB1D2O95969 90 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 F2P00734 622 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 IGKV5-2P06315 115 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 SYPP08247 313 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 SRGAP2CP0DJJ0 459 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 RAB27AP51159 221 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 KCNAB2Q13303 367 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 PPP2R5AQ15172 486 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 INF2Q27J81 1249 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 CYP27C1Q4G0S4 372 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 HSP90AB4PQ58FF6 505 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 EEF1DP3Q658K8 133 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 KIF18BQ86Y91 864 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 WDR75Q8IWA0 830 aaKnown RBP5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 SMC1BQ8NDV3 1235 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 PLBD2Q8NHP8 589 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 C8orf48Q96LL4 319 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 YIPF4Q9BSR8 244 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 TEX13AQ9BXU3 409 aaPredicted RBP5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 PUS7LQ9H0K6 701 aaKnown RBP5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 GPATCH2Q9NW75 528 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 SPATA31A5Q5VU36 1347 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 SPATA31A7Q8IWB4 1347 aa5.67□□□□□ -1.5
PPP4R3A-204ENST00000554574 SBF2Q86WG5 1849 aa5.66□□□□□ -1.5
PPP4R3A-204ENST00000554574 APPP05067 770 aa5.66□□□□□ -1.5
PPP4R3A-204ENST00000554574 PYGMP11217 842 aa5.66□□□□□ -1.5
PPP4R3A-204ENST00000554574 GSPT1P15170 499 aaKnown RBP5.66□□□□□ -1.5
PPP4R3A-204ENST00000554574 PDE1AP54750 535 aa5.66□□□□□ -1.5
PPP4R3A-204ENST00000554574 IL2P60568 153 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms