RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 HHIPL2Q6UWX4 724 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 GPC2Q8N158 579 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 LCORLQ8N3X6 602 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 TAB3Q8N5C8 712 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-212ENST00000554486 MIGA1Q8NAN2 632 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 CYB5D2Q8WUJ1 264 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 DHX38Q92620 1227 aaKnown RBP7.5□□□□□ -1.21
SCFD1-212ENST00000554486 DPF2Q92785 391 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 TEKT1Q969V4 418 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 HEXIM2Q96MH2 286 aaKnown RBP7.5□□□□□ -1.21
SCFD1-212ENST00000554486 ZDHHC15Q96MV8 337 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 STRBPQ96SI9 672 aaKnown RBP7.5□□□□□ -1.21
SCFD1-212ENST00000554486 MIPEPQ99797 713 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 TNKS2Q9H2K2 1166 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 ARMT1Q9H993 441 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 BAZ2AQ9UIF9 1905 aaKnown RBP7.5□□□□□ -1.21
SCFD1-212ENST00000554486 FOCADQ5VW36 1801 aa7.5□□□□□ -1.21
SCFD1-212ENST00000554486 GLTPD2A6NH11 291 aa7.49□□□□□ -1.21
SCFD1-212ENST00000554486 PRKAB2O43741 272 aa7.49□□□□□ -1.21
SCFD1-212ENST00000554486 SSBP05455 408 aaKnown RBP eCLIP7.49□□□□□ -1.21
SCFD1-212ENST00000554486 BTDP43251 543 aa7.49□□□□□ -1.21
SCFD1-212ENST00000554486 IRAK1P51617 712 aa7.49□□□□□ -1.21
SCFD1-212ENST00000554486 RHBDL3P58872 404 aa7.49□□□□□ -1.21
SCFD1-212ENST00000554486 PTH1RQ03431 593 aa7.49□□□□□ -1.21
SCFD1-212ENST00000554486 VPS53Q5VIR6 699 aa7.49□□□□□ -1.21
SCFD1-212ENST00000554486 LETMD1Q6P1Q0 360 aa7.49□□□□□ -1.21
SCFD1-212ENST00000554486 CDH24Q86UP0 819 aa7.49□□□□□ -1.21
SCFD1-212ENST00000554486 SH3RF3Q8TEJ3 882 aaPredicted RBP7.49□□□□□ -1.21
SCFD1-212ENST00000554486 CPLX3Q8WVH0 158 aa7.49□□□□□ -1.21
SCFD1-212ENST00000554486 VWCEQ96DN2 955 aa7.49□□□□□ -1.21
SCFD1-212ENST00000554486 ZBED3Q96IU2 234 aaPredicted RBP7.49□□□□□ -1.21
SCFD1-212ENST00000554486 FBXL18Q96ME1 805 aa7.49□□□□□ -1.21
SCFD1-212ENST00000554486 TM9SF2Q99805 663 aa7.49□□□□□ -1.21
SCFD1-212ENST00000554486 LSG1Q9H089 658 aaKnown RBP7.49□□□□□ -1.21
SCFD1-212ENST00000554486 AATFQ9NY61 560 aaKnown RBP eCLIP7.49□□□□□ -1.21
SCFD1-212ENST00000554486 GPRC5DQ9NZD1 345 aa7.49□□□□□ -1.21
SCFD1-212ENST00000554486 CNOT7Q9UIV1 285 aaKnown RBP7.49□□□□□ -1.21
SCFD1-212ENST00000554486 HDAC9Q9UKV0 1011 aa7.49□□□□□ -1.21
SCFD1-212ENST00000554486 CEP131Q9UPN4 1083 aa7.49□□□□□ -1.21
SCFD1-212ENST00000554486 POLR2AP24928 1970 aaKnown RBP7.49□□□□□ -1.21
SCFD1-212ENST00000554486 GSG1L2A8MUP6 293 aa7.48□□□□□ -1.21
SCFD1-212ENST00000554486 SMAD7O15105 426 aaKnown RBP7.48□□□□□ -1.21
SCFD1-212ENST00000554486 PRNPP04156 253 aa7.48□□□□□ -1.21
SCFD1-212ENST00000554486 HSPD1P10809 573 aaKnown RBP7.48□□□□□ -1.21
SCFD1-212ENST00000554486 GUCY2CP25092 1073 aa7.48□□□□□ -1.21
SCFD1-212ENST00000554486 EPS15P42566 896 aa7.48□□□□□ -1.21
SCFD1-212ENST00000554486 MMP14P50281 582 aa7.48□□□□□ -1.21
SCFD1-212ENST00000554486 DLGAP5Q15398 846 aa7.48□□□□□ -1.21
SCFD1-212ENST00000554486 CDC42EP5Q6NZY7 148 aa7.48□□□□□ -1.21
SCFD1-212ENST00000554486 UNC5AQ6ZN44 842 aa7.48□□□□□ -1.21
SCFD1-212ENST00000554486 VSIG10LQ86VR7 867 aa7.48□□□□□ -1.21
SCFD1-212ENST00000554486 TMEM192Q8IY95 271 aa7.48□□□□□ -1.21
SCFD1-212ENST00000554486 OR6P1Q8NGX9 317 aa7.48□□□□□ -1.21
SCFD1-212ENST00000554486 WDR90Q96KV7 1748 aa7.48□□□□□ -1.21
SCFD1-212ENST00000554486 PRMT6Q96LA8 375 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-212ENST00000554486 CCDC74BQ96LY2 380 aa7.48□□□□□ -1.21
SCFD1-212ENST00000554486 EPB41L4AQ9HCS5 686 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-212ENST00000554486 MYOZ2Q9NPC6 264 aa7.48□□□□□ -1.21
SCFD1-212ENST00000554486 CCDC39Q9UFE4 941 aa7.48□□□□□ -1.21
SCFD1-212ENST00000554486 ZC3H7BQ9UGR2 993 aaKnown RBP7.48□□□□□ -1.21
SCFD1-212ENST00000554486 OAS3Q9Y6K5 1087 aaKnown RBP7.48□□□□□ -1.21
SCFD1-212ENST00000554486 MYH1P12882 1939 aa7.48□□□□□ -1.21
SCFD1-212ENST00000554486 NAV1Q8NEY1 1877 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 A0A1W2PQH9 124 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 WNT10BO00744 389 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 KLF4O43474 513 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 WDHD1O75717 1129 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-212ENST00000554486 REC8O95072 547 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 BAG3O95817 575 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 RAG1P15918 1043 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 ATP2B1P20020 1258 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 RBM5P52756 815 aaKnown RBP eCLIP7.47□□□□□ -1.21
SCFD1-212ENST00000554486 RBL2Q08999 1139 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 ALX1Q15699 326 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 NBPF9Q3BBW0 867 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 TBC1D10BQ4KMP7 808 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-212ENST00000554486 TTC6Q86TZ1 520 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 CERS3Q8IU89 383 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 TEX11Q8IYF3 940 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 PHACTR4Q8IZ21 702 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 SDR42E1Q8WUS8 393 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 MAP4K1Q92918 833 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 NOL10Q9BSC4 688 aaKnown RBP7.47□□□□□ -1.21
SCFD1-212ENST00000554486 DSCC1Q9BVC3 393 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 CRNKL1Q9BZJ0 848 aaKnown RBP7.47□□□□□ -1.21
SCFD1-212ENST00000554486 TDRD3Q9H7E2 651 aaKnown RBP7.47□□□□□ -1.21
SCFD1-212ENST00000554486 DDX4Q9NQI0 724 aaKnown RBP7.47□□□□□ -1.21
SCFD1-212ENST00000554486 USP40Q9NVE5 1235 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 PRKAG3Q9UGI9 489 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 SLC4A4Q9Y6R1 1079 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 SCN4AP35499 1836 aa7.47□□□□□ -1.21
SCFD1-212ENST00000554486 DDX60LQ5H9U9 1706 aaKnown RBP7.47□□□□□ -1.21
SCFD1-212ENST00000554486 RPAP1Q9BWH6 1393 aaPredicted RBP7.46□□□□□ -1.21
SCFD1-212ENST00000554486 LAMA4Q16363 1823 aa7.46□□□□□ -1.21
SCFD1-212ENST00000554486 H7C1D1 291 aa7.46□□□□□ -1.22
SCFD1-212ENST00000554486 FGAP02671 866 aa7.46□□□□□ -1.22
SCFD1-212ENST00000554486 GNAT2P19087 354 aa7.46□□□□□ -1.22
SCFD1-212ENST00000554486 GTF2F1P35269 517 aaKnown RBP eCLIP7.46□□□□□ -1.22
SCFD1-212ENST00000554486 CACNB3P54284 484 aa7.46□□□□□ -1.22
SCFD1-212ENST00000554486 SF3A1Q15459 793 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms