RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 EMC7Q9NPA0 242 aa7.09□□□□□ -1.27
SCFD1-211ENST00000554437 UBA6A0AVT1 1052 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-211ENST00000554437 ANKRD62A6NC57 917 aa7.08□□□□□ -1.28
SCFD1-211ENST00000554437 CHGBP05060 677 aa7.08□□□□□ -1.28
SCFD1-211ENST00000554437 SLURP1P55000 103 aa7.08□□□□□ -1.28
SCFD1-211ENST00000554437 ADCY1Q08828 1119 aa7.08□□□□□ -1.28
SCFD1-211ENST00000554437 MCTP2Q6DN12 878 aa7.08□□□□□ -1.28
SCFD1-211ENST00000554437 KRTAP5-3Q6L8H2 238 aa7.08□□□□□ -1.28
SCFD1-211ENST00000554437 ESRP1Q6NXG1 681 aaKnown RBP7.08□□□□□ -1.28
SCFD1-211ENST00000554437 ZZZ3Q8IYH5 903 aa7.08□□□□□ -1.28
SCFD1-211ENST00000554437 ADAMTS17Q8TE56 1095 aa7.08□□□□□ -1.28
SCFD1-211ENST00000554437 BTBD2Q9BX70 525 aa7.08□□□□□ -1.28
SCFD1-211ENST00000554437 FTSJ1Q9UET6 329 aa7.08□□□□□ -1.28
SCFD1-211ENST00000554437 H0Y858 1186 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 BRINP1O60477 761 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 KNG1P01042 644 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 CYP1A1P04798 512 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-211ENST00000554437 COL6A1P12109 1028 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 CD40P25942 277 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 KCNC1P48547 511 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 IL13RA1P78552 427 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 SMAD3P84022 425 aaKnown RBP7.07□□□□□ -1.28
SCFD1-211ENST00000554437 SLC6A3Q01959 620 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 ALDH6A1Q02252 535 aaKnown RBP7.07□□□□□ -1.28
SCFD1-211ENST00000554437 ROM1Q03395 351 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 WDR72Q3MJ13 1102 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 TTC38Q5R3I4 469 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 LCE5AQ5TCM9 118 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 LCNL1Q6ZST4 164 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 SIAH1Q8IUQ4 282 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 ATL2Q8NHH9 583 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 RTF1Q92541 710 aaKnown RBP7.07□□□□□ -1.28
SCFD1-211ENST00000554437 TUBGCP5Q96RT8 1024 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 FOXB1Q99853 325 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 FAM126AQ9BYI3 521 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-211ENST00000554437 TMEM168Q9H0V1 697 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 OR10A5Q9H207 317 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 ZMAT4Q9H898 229 aa7.07□□□□□ -1.28
SCFD1-211ENST00000554437 APOBEC2Q9Y235 224 aaKnown RBP7.07□□□□□ -1.28
SCFD1-211ENST00000554437 BMP7P18075 431 aa7.06□□□□□ -1.28
SCFD1-211ENST00000554437 LSP1P33241 339 aa7.06□□□□□ -1.28
SCFD1-211ENST00000554437 STAT4Q14765 748 aa7.06□□□□□ -1.28
SCFD1-211ENST00000554437 DDB1Q16531 1140 aa7.06□□□□□ -1.28
SCFD1-211ENST00000554437 PRAMEF9Q5VWM5 478 aa7.06□□□□□ -1.28
SCFD1-211ENST00000554437 ZNF761Q86XN6 746 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-211ENST00000554437 SP8Q8IXZ3 490 aa7.06□□□□□ -1.28
SCFD1-211ENST00000554437 C7orf31Q8N865 590 aa7.06□□□□□ -1.28
SCFD1-211ENST00000554437 TXNDC5Q8NBS9 432 aaKnown RBP7.06□□□□□ -1.28
SCFD1-211ENST00000554437 SLC5A5Q92911 643 aa7.06□□□□□ -1.28
SCFD1-211ENST00000554437 MAML3Q96JK9 1138 aa7.06□□□□□ -1.28
SCFD1-211ENST00000554437 TRIM13O60858 407 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 RAB11FIP3O75154 756 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 KLHL18O94889 574 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 EYA4O95677 639 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 PRLP01236 227 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 APEX1P27695 318 aaKnown RBP7.05□□□□□ -1.28
SCFD1-211ENST00000554437 ADCY8P40145 1251 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 RGS3P49796 1198 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 PHC1P78364 1004 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 CD83Q01151 205 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 LRRC32Q14392 662 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 STILQ15468 1287 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 TERF2Q15554 542 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 KRTAP19-4Q3LI73 84 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 RGL3Q3MIN7 710 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 FAM26FQ5R3K3 315 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 BROXQ5VW32 411 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 SLFN12LQ6IEE8 588 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 TIGD7Q6NT04 549 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-211ENST00000554437 CXXC5Q7LFL8 322 aaKnown RBP7.05□□□□□ -1.28
SCFD1-211ENST00000554437 PHYKPLQ8IUZ5 450 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 ZNF610Q8N9Z0 462 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 NUDT10Q8NFP7 164 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 NUDT11Q96G61 164 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 YTHDC1Q96MU7 727 aaKnown RBP7.05□□□□□ -1.28
SCFD1-211ENST00000554437 LUC7LQ9NQ29 371 aaKnown RBP7.05□□□□□ -1.28
SCFD1-211ENST00000554437 MCM8Q9UJA3 840 aa7.05□□□□□ -1.28
SCFD1-211ENST00000554437 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-211ENST00000554437 SASH1O94885 1247 aa7.04□□□□□ -1.28
SCFD1-211ENST00000554437 APOL3O95236 402 aa7.04□□□□□ -1.28
SCFD1-211ENST00000554437 POU3F3P20264 500 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-211ENST00000554437 GJA9P57773 515 aa7.04□□□□□ -1.28
SCFD1-211ENST00000554437 TMPRSS15P98073 1019 aa7.04□□□□□ -1.28
SCFD1-211ENST00000554437 GPR158Q5T848 1215 aa7.04□□□□□ -1.28
SCFD1-211ENST00000554437 SPOCD1Q6ZMY3 1216 aa7.04□□□□□ -1.28
SCFD1-211ENST00000554437 HDGFL2Q7Z4V5 671 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-211ENST00000554437 DDX42Q86XP3 938 aaKnown RBP eCLIP7.04□□□□□ -1.28
SCFD1-211ENST00000554437 MARCH10Q8NA82 808 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-211ENST00000554437 SYT8Q8NBV8 401 aa7.04□□□□□ -1.28
SCFD1-211ENST00000554437 WDR66Q8TBY9 1149 aa7.04□□□□□ -1.28
SCFD1-211ENST00000554437 POFUT1Q9H488 388 aa7.04□□□□□ -1.28
SCFD1-211ENST00000554437 MSRAQ9UJ68 235 aa7.04□□□□□ -1.28
SCFD1-211ENST00000554437 ULK1O75385 1050 aa7.03□□□□□ -1.28
SCFD1-211ENST00000554437 NT5DC1Q5TFE4 455 aa7.03□□□□□ -1.28
SCFD1-211ENST00000554437 KANK2Q63ZY3 851 aa7.03□□□□□ -1.28
SCFD1-211ENST00000554437 LHFPL2Q6ZUX7 228 aa7.03□□□□□ -1.28
SCFD1-211ENST00000554437 OTOP2Q7RTS6 562 aa7.03□□□□□ -1.28
SCFD1-211ENST00000554437 ZCRB1Q8TBF4 217 aaKnown RBP7.03□□□□□ -1.28
SCFD1-211ENST00000554437 LCORQ96JN0 433 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-211ENST00000554437 MS4A5Q9H3V2 200 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms